BAC Information

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BAC

Clone NameB6Ng01-105E14
Chromosome15 (Build37)
Map Location 6,954,640 - 7,058,701
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC666323, Dab2, C9, LOC100039396, LOC100039412, Fyb, LOC100039453, EG665511, 4921505C17Rik, Osmr
Downstream geneLifr, Egflam, Gdnf, Wdr70, LOC665556, LOC621001
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105E14.bB6Ng01-105E14.g
ACCDH913352DH913353
length1,0821,099
definitionDH913352|Mus musculus domesticus DNA, BAC clone: B6Ng01-105E14, 5' end.DH913353|Mus musculus domesticus DNA, BAC clone: B6Ng01-105E14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,954,640 - 6,955,723)(7,057,599 - 7,058,701)
sequence
gaattcagacgtagggcagggcacatcacaacattatttgtattacccta
gctcttgtttgtgacccacgtcctgaacttctttgtaccaagcccagtaa
gcaaaataaagctgagaatggtgtctttgtcctattataaaaacattcga
ggataccttatttgcatattataaacgtttgcataaggccttttgttaag
tggtatgagtcccctttgaaacaagacattctatcagttcatagtgcatt
cccaggcagagcaaaggtaggccacacacaagaagtatgctttgaaatcc
tttccacattaggaaagagaaaacacaattaagcaaatttgctatggtga
gaagctttgctttcctggcctgtaatggagacagagctttgagcaagaga
agtgccaagttgtatgtgattcctaaacccttctaagtgtttaataatta
atgcttatttttccttctattcttttccactccctcatctcctttatatg
gatctttgacacccactagggaattagatggtcttcagctgtttacataa
tcagagatttaaggctagcttaaggagaaagttaggtcaaaaactaaata
atgataagaaaagcagaaaagttgcttgcctggggcggggagtagcacac
taagctttggtcttaacagcctcaagagcatctgtttaaagtttttttgg
tagactcatgcaagtgggggtggttggtgaatatttatatagctggataa
aatgaaaagcaagttgaaaatgataccatccttctctctagaaagaatcc
attgtgcacaaccctctaccccaaacatttcacttgggtttctgtccttc
tgggctcatcttctctgctttgtggtatctgatgtggcagactgacccca
tcacagcctgagattccctggggagacaatgtgcatctttgtatgggtta
gatcttcgtatcttgaaaaagacatgctttcgtccctctgcttttcttac
cccttctactgttcccctggacgactgatgcaattggccacgaattcata
accattgtttccacaaggatggaatgatgaga

gaattctatgcaaatgtctctaatattatgctaactagttccaagctgtt
gaaatttaatagtattaatggaaagctcagatgaggtgaatctaaaaagc
cggttcttccgggcaggtgagagttccagaaaagattttacttttaaagc
cttttcattactctgtttggaattaggcaattcctgtaaattaaagcagt
gcgcctttgtctccccgtttatgggaaacttgactttgaaattcacgagc
aactctgtagtgataaatatgcacaaggcctactggcatctactgttgac
ttagttggagctggcagtctgctttctttcccctccactcaaggacctct
tcacatctcttcttcctaaccccatgatgctttctttgagtgtttcccct
gctgtttcttggtcttcttccaaatcctcagcctctcaggcaaattttcc
ctgggtctgtccttcctacgagccaacatacacccaatagcccgtgtgat
cttggaaacatgggagccgaccctctcttttctatcttcacatttgtata
aaggttacagggacagcgtactacccagttcttagctgtggcctagctga
gttagtgaacttctagccaggtatgatgatgaaccacctctaatctcagt
actcggcaggagcatggttgaattaggatggcccccataggctcagagct
ttgagtgcttggtcaccaggaagcggcactataagcaagtatagaactgg
gactttgaggtttcaaaacccaagccaggcccagtcttcctgctgcctgt
ggattcagatgtataactctcagctactacattgggctgtgcgccaccat
acacaacagacggagcctctgatactgtaaagccagtcccagctaaatgc
ttttctttataagagttgctgtggttgtagtatcttcttcacagcagcaa
aacaatgactaggtcagaaggcaggctgaagtcagcctgaggtgaatgaa
accttgccttaaaattcagtcatttcctctgtacctcaagttcttcctct
cctaggaaaaatccctcgcccccccaactggatagatcccttatgctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_6954640_6955723
seq2: B6Ng01-105E14.b_42_1123

seq1  GAATTCAGACGTAGGGCAGGGCACATCAAAACATTATTTGTATTACCCTA  50
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GAATTCAGACGTAGGGCAGGGCACATCACAACATTATTTGTATTACCCTA  50

seq1  GCTCTTGTTTGTGACCCACGTCCTGAACTTCTTTGTACCAAGCCCAGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGTTTGTGACCCACGTCCTGAACTTCTTTGTACCAAGCCCAGTAA  100

seq1  GCAAAATAAAGCTGAGAATGGTGTCTTTGTCCTATTATAAAAACATTCGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATAAAGCTGAGAATGGTGTCTTTGTCCTATTATAAAAACATTCGA  150

seq1  GGATACCTTATTTGCATATTATAAACGTTTGCATAAGGCCTTTTGTTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACCTTATTTGCATATTATAAACGTTTGCATAAGGCCTTTTGTTAAG  200

seq1  TGGTATGAGTCCCCTTTGAAACAAGACATTCTATCAGTTCATAGTGCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATGAGTCCCCTTTGAAACAAGACATTCTATCAGTTCATAGTGCATT  250

seq1  CCCAGGCAGAGCAAAGGTAGGCCACACACAAGAAGTATGCTTTGAAATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCAGAGCAAAGGTAGGCCACACACAAGAAGTATGCTTTGAAATCC  300

seq1  TTTCCACATTAGGAAAGAGAAAACACAATTAAGCAAATTTGCTATGGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACATTAGGAAAGAGAAAACACAATTAAGCAAATTTGCTATGGTGA  350

seq1  GAAGCTTTGCTTTCCTGGCCTGTAATGGAGACAGAGCTTTGAGCAAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTTTGCTTTCCTGGCCTGTAATGGAGACAGAGCTTTGAGCAAGAGA  400

seq1  AGTGCCAAGTTGTATGTGATTCCTAAACCCTTCTAAGTGTTTAATAATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCAAGTTGTATGTGATTCCTAAACCCTTCTAAGTGTTTAATAATTA  450

seq1  ATGCTTATTTTTCCTTCTATTCTTTTCCACTCCCTCATCTCCTTTATATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTATTTTTCCTTCTATTCTTTTCCACTCCCTCATCTCCTTTATATG  500

seq1  GATCTTTGACACCCACTAGGGAATTAGATGGTCTTCAGCTGTTTACATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTTGACACCCACTAGGGAATTAGATGGTCTTCAGCTGTTTACATAA  550

seq1  TCAGAGATTTAAGGCTAGCTTAAGGAGAAAGTTAGGTCAAAAACTAAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGATTTAAGGCTAGCTTAAGGAGAAAGTTAGGTCAAAAACTAAATA  600

seq1  ATGATAAGAAAAGCAGAAAAGTTGCTTGCCTGGGGCGGGGAGTAGCACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAAGAAAAGCAGAAAAGTTGCTTGCCTGGGGCGGGGAGTAGCACAC  650

seq1  TAAGCTTTGGTCTTAACAGCCTCAAGAGCATCTGTTTAAAGTTTTTTTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTTTGGTCTTAACAGCCTCAAGAGCATCTGTTTAAAGTTTTTTTGG  700

seq1  TAGACTCATGCAAGTGGGGGTGGTTGGTGAATATTTATATAGCTGGATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTCATGCAAGTGGGGGTGGTTGGTGAATATTTATATAGCTGGATAA  750

seq1  AATG-AAAGCAAGTTGAAAATGATACCATCCTTCTCTCTAGAAGGAATCC  799
      |||| |||||||||||||||||||||||||||||||||||||| ||||||
seq2  AATGAAAAGCAAGTTGAAAATGATACCATCCTTCTCTCTAGAAAGAATCC  800

seq1  ATTGTGCACAACCCTCTACCCCAAACA-TTCACTTGGGTTTCTGTCCTTC  848
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATTGTGCACAACCCTCTACCCCAAACATTTCACTTGGGTTTCTGTCCTTC  850

seq1  TGGGCTCATCTTCTCTGCTTTGTGTTATCTGATGTGGCAGAACTGACCCC  898
      |||||||||||||||||||||||| ||||||||||||||| |||||||||
seq2  TGGGCTCATCTTCTCTGCTTTGTGGTATCTGATGTGGCAG-ACTGACCCC  899

seq1  AGCACAGCCTGAGATTCCCTGGGGAGACAATGTTGCATCTTTGTATGGGT  948
      | |||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATCACAGCCTGAGATTCCCTGGGGAGACAATG-TGCATCTTTGTATGGGT  948

seq1  TAGATC-TCGTATC-TGGAAGAGACATGCTTCTCGACCCTCTGCCTCTCC  996
      |||||| ||||||| || || |||||||||| ||| |||||||| | || 
seq2  TAGATCTTCGTATCTTGAAAAAGACATGCTT-TCGTCCCTCTGCTTTTCT  997

seq1  TACCCC-TCTACTGTTCCCCTGACAGACTGAAGCAAAATTGGCCACGAAT  1045
      |||||| |||||||||||||||   |||||| ||  ||||||||||||||
seq2  TACCCCTTCTACTGTTCCCCTGGACGACTGATGC--AATTGGCCACGAAT  1045

seq1  TCCATAAACCATTG-TTCCACAAGGACTGGAAAGATGAGA  1084
      | ||| |||||||| ||||||||||| ||||| |||||||
seq2  T-CAT-AACCATTGTTTCCACAAGGA-TGGAATGATGAGA  1082


seq1: chr15_7057599_7058701
seq2: B6Ng01-105E14.g_69_1167 (reverse)

seq1  TGAGCAATAGGGATCTATCAAGTTGTGGTGGGCGAGTGATTTATTTCTTA  50
      ||||||  ||||||||||| ||||| || ||||||| ||||  |||| ||
seq2  TGAGCATAAGGGATCTATCCAGTTG-GGGGGGCGAGGGATT--TTTCCTA  47

seq1  AGAGAGGAAGAAACTGAGGTACAGAGAAATTGACTGATATTCTAAGGCAA  100
       |||||||||||  |||||||||||| || ||||||| ||| ||||||||
seq2  GGAGAGGAAGAACTTGAGGTACAGAGGAAATGACTGA-ATTTTAAGGCAA  96

seq1  GGTTTCATTCAACCTCAGGCTGACCTCAAGCCTGCCTTCTGACCTAGTCA  150
      |||||||||| ||||||||||||| || ||||||||||||||||||||||
seq2  GGTTTCATTC-ACCTCAGGCTGACTTC-AGCCTGCCTTCTGACCTAGTCA  144

seq1  TTGTTTTGCTGCTGTGAAG-AGATACTACAACCACAGCAACTCTTATAAA  199
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTGTTTTGCTGCTGTGAAGAAGATACTACAACCACAGCAACTCTTATAAA  194

seq1  GAAAAGCATTTAGCTGGGACTGGC-TTACAGTTTCAGAGGCTCCGTCTGT  248
      |||||||||||||||||||||||| ||||||| |||||||||||||||||
seq2  GAAAAGCATTTAGCTGGGACTGGCTTTACAGTATCAGAGGCTCCGTCTGT  244

seq1  TGTGTATGGTGGCGCACAGGCCAATGTAGTAGCTGAGAGTTATACATCTG  298
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGTGTATGGTGGCGCACAGCCCAATGTAGTAGCTGAGAGTTATACATCTG  294

seq1  AATCCACAGGCAGCAGGAAGACTGGGCCTGGCTTGGGTTTTGAAACCTCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCACAGGCAGCAGGAAGACTGGGCCTGGCTTGGGTTTTGAAACCTCA  344

seq1  AAGTCCCAGTTCTATACTTGCTTATAGTGCCGCTTCCTGGTGACCAAGCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCCAGTTCTATACTTGCTTATAGTGCCGCTTCCTGGTGACCAAGCA  394

seq1  CTCAAAGCTCTGAGCCTATGGGGGCCATCCTAATTCAACCATGCTCCTGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGCTCTGAGCCTATGGGGGCCATCCTAATTCAACCATGCTCCTGC  444

seq1  CGAGTACTGAGATTAGAGGTGGTTCATCATCATACCTGGCTAGAAGTTCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTACTGAGATTAGAGGTGGTTCATCATCATACCTGGCTAGAAGTTCA  494

seq1  CTAACTCAGCTAGGCCACAGCTAAGAACTGGGTAGTACGCTGTCCCTGTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTCAGCTAGGCCACAGCTAAGAACTGGGTAGTACGCTGTCCCTGTA  544

seq1  ACCTTTATACAAATGTGAAGATAGAAAAGAGAGGGTCGGCTCCCATGTTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTATACAAATGTGAAGATAGAAAAGAGAGGGTCGGCTCCCATGTTT  594

seq1  CCAAGATCACACGGGCTATTGGGTGTATGTTGGCTCGTAGGAAGGACAGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATCACACGGGCTATTGGGTGTATGTTGGCTCGTAGGAAGGACAGA  644

seq1  CCCAGGGAAAATTTGCCTGAGAGGCTGAGGATTTGGAAGAAGACCAAGAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGGAAAATTTGCCTGAGAGGCTGAGGATTTGGAAGAAGACCAAGAA  694

seq1  ACAGCAGGGGAAACACTCAAAGAAAGCATCATGGGGTTAGGAAGAAGAGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGGGGAAACACTCAAAGAAAGCATCATGGGGTTAGGAAGAAGAGA  744

seq1  TGTGAAGAGGTCCTTGAGTGGAGGGGAAAGAAAGCAGACTGCCAGCTCCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAGAGGTCCTTGAGTGGAGGGGAAAGAAAGCAGACTGCCAGCTCCA  794

seq1  ACTAAGTCAACAGTAGATGCCAGTAGGCCTTGTGCATATTTATCACTACA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGTCAACAGTAGATGCCAGTAGGCCTTGTGCATATTTATCACTACA  844

seq1  GAGTTGCTCGTGAATTTCAAAGTCAAGTTTCCCATAAACGGGGAGACAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGCTCGTGAATTTCAAAGTCAAGTTTCCCATAAACGGGGAGACAAA  894

seq1  GGCGCACTGCTTTAATTTACAGGAATTGCCTAATTCCAAACAGAGTAATG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCACTGCTTTAATTTACAGGAATTGCCTAATTCCAAACAGAGTAATG  944

seq1  AAAAGGCTTTAAAAGTAAAATCTTTTCTGGAACTCTCACCTGCCCGGAAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCTTTAAAAGTAAAATCTTTTCTGGAACTCTCACCTGCCCGGAAG  994

seq1  AACCGGCTTTTTAGATTCACCTCATCTGAGCTTTCCATTAATACTATTAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGGCTTTTTAGATTCACCTCATCTGAGCTTTCCATTAATACTATTAA  1044

seq1  ATTTCAACAGCTTGGAACTAGTTAGCATAATATTAGAGACATTTGCATAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAACAGCTTGGAACTAGTTAGCATAATATTAGAGACATTTGCATAG  1094

seq1  AATTC  1103
      |||||
seq2  AATTC  1099


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