BAC Information

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BAC

Clone NameB6Ng01-107L04
Chromosome15 (Build37)
Map Location 81,054,023 - 81,200,026
singlet/doubletdoublet
Overlap geneMchr1, Slc25a17, St13
Upstream geneEG666948, Smcr7l, Atf4, Rps19bp1, Cacna1i, Enthd1, Grap2, AW544981, Tnrc6b, Adsl, LOC625672, Rutbc3, Mkl1, LOC675966
Downstream geneXpnpep3, Dnajb7, Rbx1, EG383080, Ep300, L3mbtl2, Rangap1, Zc3h7b, Tef, LOC667073, Tob2, Phf5a, Aco2, Polr3h, Csdc2, Pmm1, EG545121, 1700029P11Rik, D15Wsu75e, Xrcc6, Nhp2l1, 4930407I10Rik, Mei1, Ccdc134, Srebf2, LOC435145, Tnfrsf13c, Cenpm, 1500009C09Rik, Sept3, Wbp2nl, Naga, C920005C14Rik, 1500032L24Rik, Ndufa6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107L04.bB6Ng01-107L04.g
ACCDH915090DH915091
length1,1411,085
definitionDH915090|Mus musculus domesticus DNA, BAC clone: B6Ng01-107L04, 5' end.DH915091|Mus musculus domesticus DNA, BAC clone: B6Ng01-107L04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,054,023 - 81,055,168)(81,198,940 - 81,200,026)
sequence
gaattcacatataaaatacatccttttaaaggatactatataaagtatac
agtaaactgtgtgtggtgctgcatacctataattcaggagttaaaggcag
gaaaatcaggggttcaaggccatcctcacctacatagccgttctgaggcc
agcctatgttacaggagactcaaaaaataaaataaacctaacgcgtagag
gttaacggcttttgcgcatatttgcagtgatactaattcacaataaacat
aacatgtcctttatcccattagcagccattttctctctcatttctctttt
aagtcccagacttgggaaaacaggaatctattttctctatagattctcct
cttctcgacacttcattagatagaactgaacaaccacagtctttgtggca
taatgacttcaaggtccatccacgcagtggccttcgtttggatttctttt
tcatggatggataatattttattgaatggaagtactacatttttgtgtcc
attaggtagaaggacttttcagttgtttctataccttctggctgctataa
acatgtatgtgtgaatttttgtggcgctacttttcaaaaatcttctcttg
ggtatgcagtcagttctgtgcatttaagggttcagtcagtgtgggtggcc
gtgtgggggctgggagctgcctctgtcctgaatgtgtggatgccattccc
ccttgtcattcctaaactatacagtatagcagctttttacgtcacattta
cgttgtcttagctgccacagttaccgagataacagtgtaaagaatgtgtg
gagcctgaggaaggagtatgggacttcaaggccagcctaggctacagagt
gagaccttggtctcaaaatatcaacaagttaactaaattaaatgtaaaaa
tctaaaatatataggaaaggttaagcctgggttcaatatctaacagcacc
atttgggtgcacacacatatgcatgtacacatgtgagcacacacagtgtt
tgggaagattttgcggcttctaagtaaatgtactattttacataatagga
cttgaaatctatagattttatattttttgtgatgttttaaaaatttatta
ttattaatttaaatgtatgggtttttgttacatgaatgtct
gaattcatcttgatccttaccattcttactgtcttctcgcttactttttg
atttccttggacaggttaggtatgggaagaaaactttctttttgttgctg
ctgctgttgtttttcttcttctgttatataatttgttttcattttgtttt
caaggaagaagaagccagaagacaatccggatctcagtatggctcttttc
caggtatttttttttaaaggaaaacctgtcagtgggataaataatttaag
atatatctcgttttgggaactgggctgtgtctgcatatggggaagagaga
gttcttagaactccagagaataaagttcattctcaaacagcattgtttct
cctgtacatagtttgagttacaactttaagaaaaataaatagtttttgag
ggctgagtattataattcaaacaatttattataatgtaatctgtgtctaa
tttgccaagataagattatgtcctgttacatgtgataatgtttatattca
tgaggatactggctaaaatcatacatagagctggagtggtggctcagtgg
ttaagagcatgggctgctcttccagaagaccagggttcagtcccagcacc
cacatagtagcttacagctggctgtaatcctagttccagtggaatccatt
gtcatcttctggccttcacaggcatcaggaatggatgtcacatatagaca
tacatgcaggcaaaatactgcaaaaatattttaaaagtcaggttattact
gtgcataaaaatattttgagtccagtctgagaggagaactggagttaata
tttaacaggcagttctgagccttgcaaattggatactgggaactgaactc
tggtcttttcgaagtttaactgttgagccatcttttcattctggaaaatg
ttttataatgagaaatatagaaaaaaaagcttttgagggttcacatctga
ttgttagaaaagtgaggatgcagagacactgaaaagataagttttgctgc
ctgaatgagcaatgtgagcttatctggaaatgtactctaaaagacaggtt
ccgggtttgtgttggttgttgtttgtttttttttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_81054023_81055168
seq2: B6Ng01-107L04.b_47_1187

seq1  GAATTCACATATAAAATACATCCTTTTAAAGGATACTATATAAAGTATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATATAAAATACATCCTTTTAAAGGATACTATATAAAGTATAC  50

seq1  AGTAAACTGTGTGTGGTGCTGCATACCTATAATTCAGGAGTTAAAGGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAACTGTGTGTGGTGCTGCATACCTATAATTCAGGAGTTAAAGGCAG  100

seq1  GAAAATCAGGGGTTCAAGGCCATCCTCACCTACATAGCCGTTCTGAGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCAGGGGTTCAAGGCCATCCTCACCTACATAGCCGTTCTGAGGCC  150

seq1  AGCCTATGTTACAGGAGACTCAAAAAATAAAATAAACCTAACGCGTAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTATGTTACAGGAGACTCAAAAAATAAAATAAACCTAACGCGTAGAG  200

seq1  GTTAACGGCTTTTGCGCATATTTGCAGTGATACTAATTCACAATAAACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACGGCTTTTGCGCATATTTGCAGTGATACTAATTCACAATAAACAT  250

seq1  AACATGTCCTTTATCCCATTAGCAGCCATTTTCTCTCTCATTTCTCTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTCCTTTATCCCATTAGCAGCCATTTTCTCTCTCATTTCTCTTTT  300

seq1  AAGTCCCAGACTTGGGAAAACAGGAATCTATTTTCTCTATAGATTCTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCCAGACTTGGGAAAACAGGAATCTATTTTCTCTATAGATTCTCCT  350

seq1  CTTCTCGACACTTCATTAGATAGAACTGAACAACCACAGTCTTTGTGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCGACACTTCATTAGATAGAACTGAACAACCACAGTCTTTGTGGCA  400

seq1  TAATGACTTCAAGGTCCATCCACGCAGTGGCCTTCGTTTGGATTTCTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGACTTCAAGGTCCATCCACGCAGTGGCCTTCGTTTGGATTTCTTTT  450

seq1  TCATGGATGGATAATATTTTATTGAATGGAAGTACTACATTTTTGTGTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGATGGATAATATTTTATTGAATGGAAGTACTACATTTTTGTGTCC  500

seq1  ATTAGGTAGAAGGACTTTTCAGTTGTTTCTATACCTTCTGGCTGCTATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGTAGAAGGACTTTTCAGTTGTTTCTATACCTTCTGGCTGCTATAA  550

seq1  ACATGTATGTGTGAATTTTTGTGGCGCTACTTTTCAAAAATCTTCTCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTATGTGTGAATTTTTGTGGCGCTACTTTTCAAAAATCTTCTCTTG  600

seq1  GGTATGCAGTCAGTTCTGTGCATTTAAGGGTTCAGTCAGTGTGGGTGGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGCAGTCAGTTCTGTGCATTTAAGGGTTCAGTCAGTGTGGGTGGCC  650

seq1  GTGTGGGGGCTGGGAGCTGCCTCTGTCCTGAATGTGTGGATGCCATTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGGGGCTGGGAGCTGCCTCTGTCCTGAATGTGTGGATGCCATTCCC  700

seq1  CCTTGTCATTCCTAAACTATACAGTATAGCAGCTTTTTACGTCACATTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTCATTCCTAAACTATACAGTATAGCAGCTTTTTACGTCACATTTA  750

seq1  CGTTGTCTTAGCTGCCACAGTTACCGAGATAACAGTGTAAAGAAGGTGTG  800
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CGTTGTCTTAGCTGCCACAGTTACCGAGATAACAGTGTAAAGAATGTGTG  800

seq1  GAGCCTGAGGAAGGAGTATGGGACTTCAAGGCCAGCCTAGGCTACAGAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGAGGAAGGAGTATGGGACTTCAAGGCCAGCCTAGGCTACAGAGT  850

seq1  GAGACCTTGGTCTCAAAATATCAACAAGTTAACTAAATTAAATGTAAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCTTGGTCTCAAAATATCAACAAGTTAACTAAATTAAATGTAAAAA  900

seq1  TCTAAAATATATAGGAAAGGTTAAGGCCTGGGTTCAATATCTAACAGCA-  949
      |||||||||||||||||||||||| |||||||||||||||||||||||| 
seq2  TCTAAAATATATAGGAAAGGTTAA-GCCTGGGTTCAATATCTAACAGCAC  949

seq1  CATTTGGGTGCACACACATATGCATGTACACATGTGAGCACACACAAGTG  999
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CATTTGGGTGCACACACATATGCATGTACACATGTGAGCACACAC-AGTG  998

seq1  TTTGGGAAGATGTTTGCGGGTTCTAAGTAAATGTACTATTTTACAT-ATA  1048
      ||||||||||| ||||||| |||||||||||||||||||||||||| |||
seq2  TTTGGGAAGAT-TTTGCGGCTTCTAAGTAAATGTACTATTTTACATAATA  1047

seq1  GGACTTGAAAATCTATAGATTTTTATA-TCTTTGTGATGTTTTAAACATT  1097
      ||||||| ||||||||||| ||||||| | |||||||||||||||| |||
seq2  GGACTTG-AAATCTATAGA-TTTTATATTTTTTGTGATGTTTTAAAAATT  1095

seq1  TATTATTATTAATTTTATATGTATGGGTGTTTTGCTTACATGTATGTCT  1146
      |||||||||||| |||| |||||||||| ||||| ||||||| ||||||
seq2  TATTATTATTAA-TTTAAATGTATGGGT-TTTTG-TTACATGAATGTCT  1141

seq1: chr15_81198940_81200026
seq2: B6Ng01-107L04.g_72_1156 (reverse)

seq1  CAAAACAAAACAA--AACAA--AACACAAAACCCGGAACCTGTCTTTTAG  46
      ||||| |||||||  |||||  ||||| ||||||||||||||||||||||
seq2  CAAAAAAAAACAAACAACAACCAACAC-AAACCCGGAACCTGTCTTTTAG  49

seq1  AAGTACATTTCCAGATAAGCTTCACAGTGCCTCATTCAGGCAGCAAAACT  96
       ||||||||||||||||||| ||||| || ||||||||||||||||||||
seq2  -AGTACATTTCCAGATAAGC-TCACATTG-CTCATTCAGGCAGCAAAACT  96

seq1  TATTCTCTCAGTGTCTCTGCATCCTCACCTATCTGAACATCAGATGTGAA  146
      |||  | ||||||||||||||||||||| | ||| |  ||||||||||||
seq2  TATCTTTTCAGTGTCTCTGCATCCTCACTTTTCTAACAATCAGATGTGAA  146

seq1  CCCTCAAAAGCTTTGTTTTACTAATAATTTCTCATTATAAAACATTTTCC  196
      |||||||||||||| |||| |||   ||||||||||||||||||||||||
seq2  CCCTCAAAAGCTTT-TTTTTCTA--TATTTCTCATTATAAAACATTTTCC  193

seq1  AGAATGAAAAGATGGCTCAACAGTTAAACTTCGAAAAGACCAGAGTTCAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAAAAGATGGCTCAACAGTTAAACTTCGAAAAGACCAGAGTTCAG  243

seq1  TTCCCAGTATCCAATTTGCAAGGCTCAGAACTGCCTGTTAAATATTAACT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGTATCCAATTTGCAAGGCTCAGAACTGCCTGTTAAATATTAACT  293

seq1  CCAGTTCTCCTCTCAGACTGGACTC-AAATATTTTTATGCACAGTAATAA  345
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCAGTTCTCCTCTCAGACTGGACTCAAAATATTTTTATGCACAGTAATAA  343

seq1  CCTGACTTTTAAAATATTTTTGCAGTATTTTGCCTGCATGTATGTCTATA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTTTTAAAATATTTTTGCAGTATTTTGCCTGCATGTATGTCTATA  393

seq1  TGTGACATCCATTCCTGATGCCTGTGAAGGCCAGAAGATGACAATGGATT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACATCCATTCCTGATGCCTGTGAAGGCCAGAAGATGACAATGGATT  443

seq1  CCACTGGAACTAGGATTACAGCCAGCTGTAAGCTACTATGTGGGTGCTGG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGGAACTAGGATTACAGCCAGCTGTAAGCTACTATGTGGGTGCTGG  493

seq1  GACTGAACCCTGGTCTTCTGGAAGAGCAGCCCATGCTCTTAACCACTGAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAACCCTGGTCTTCTGGAAGAGCAGCCCATGCTCTTAACCACTGAG  543

seq1  CCACCACTCCAGCTCTATGTATGATTTTAGCCAGTATCCTCATGAATATA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACTCCAGCTCTATGTATGATTTTAGCCAGTATCCTCATGAATATA  593

seq1  AACATTATCACATGTAACAGGACATAATCTTATCTTGGCAAATTAGACAC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTATCACATGTAACAGGACATAATCTTATCTTGGCAAATTAGACAC  643

seq1  AGATTACATTATAATAAATTGTTTGAATTATAATACTCAGCCCTCAAAAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTACATTATAATAAATTGTTTGAATTATAATACTCAGCCCTCAAAAA  693

seq1  CTATTTATTTTTCTTAAAGTTGTAACTCAAACTATGTACAGGAGAAACAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTATTTTTCTTAAAGTTGTAACTCAAACTATGTACAGGAGAAACAA  743

seq1  TGCTGTTTGAGAATGAACTTTATTCTCTGGAGTTCTAAGAACTCTCTCTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTTGAGAATGAACTTTATTCTCTGGAGTTCTAAGAACTCTCTCTT  793

seq1  CCCCATATGCAGACACAGCCCAGTTCCCAAAACGAGATATATCTTAAATT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATATGCAGACACAGCCCAGTTCCCAAAACGAGATATATCTTAAATT  843

seq1  ATTTATCCCACTGACAGGTTTTCCTTTAAAAAAAAATACCTGGAAAAGAG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCCCACTGACAGGTTTTCCTTTAAAAAAAAATACCTGGAAAAGAG  893

seq1  CCATACTGAGATCCGGATTGTCTTCTGGCTTCTTCTTCCTTGAAAACAAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACTGAGATCCGGATTGTCTTCTGGCTTCTTCTTCCTTGAAAACAAA  943

seq1  ATGAAAACAAATTATATAACAGAAGAAGAAAAACAACAGCAGCAGCAACA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAACAAATTATATAACAGAAGAAGAAAAACAACAGCAGCAGCAACA  993

seq1  AAAAGAAAGTTTTCTTCCCATACCTAACCTGTCCAAGGAAATCAAAAAGT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAGTTTTCTTCCCATACCTAACCTGTCCAAGGAAATCAAAAAGT  1043

seq1  AAGCGAGAAGACAGTAAGAATGGTAAGGATCAAGATGAATTC  1087
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGAGAAGACAGTAAGAATGGTAAGGATCAAGATGAATTC  1085