BAC Information

Click to search

BAC

Clone NameB6Ng01-107M16
Chromosome15 (Build37)
Map Location 47,280,731 - 47,281,186
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039438, LOC665130, LOC100039485
Downstream geneLOC100039493, Csmd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107M16.bB6Ng01-107M16.g
ACCDH915154DH915155
length1,081450
definitionDH915154|Mus musculus domesticus DNA, BAC clone: B6Ng01-107M16, 5' end.DH915155|Mus musculus domesticus DNA, BAC clone: B6Ng01-107M16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacggagacctctggacaggcctggtgcaagggttgtggtgaag
ggaagagaatgcaggcagggagcggaagtcacttcctcacttccgctgtg
caggttagcttcacctccatctctgctgtgctataattctgtgccaccct
gcgctgagtcggttcagactgggctgacaagctgactatccagtgagaag
tcaggcagggcctcaggtggcacttcgggagagctgatctctccccaagt
gttacagctcttaggacaaaggctcggacaacagagtagttctcaagtac
acatttattccctggataggacttattatatacagttttggggatgattc
aggatttgacagcaggtacttctcattggcttggactgacagtttgggga
aaccttattaacatgtaggaggacttggtgcagctaatatgtaattgatg
ccacatacctctctgtaagggggtgggtgtaggtggctgtagctatatga
caggagccagatgcccaggagtcatgaccaaactccttccgtcccatgca
ggtgaaatcatcgctggccggggctctgaagtttcagacctttgctcgac
cgggaaccaggctatctgcacagcccaccaccccacaactcccccttttt
ctttttataagggagaggtgtcatcaaaataactgtcttctatgtcggga
acagtttgataccgaaccatggcctgattgatagtgatttttgaaatgct
acttatctgctgctttagaaactgaatgagacagggtgcctagagaagca
gggctccaatggctagtatggggccaaggagggtaagaattcagctacca
atagcttaaagtaccaagggataggtgtgttgggagtatagtgtgcccag
agattcccccagagttctttgagcattttatatcttttctaccagcccag
attctttgataataaatcacatttctccccagcaaaacgcattcccttcc
tgttcaacatcaataagtccagggttcttcgattttgaagagcaatctga
ctagccggtatccccattgaaccactcaatg
tgggggtactgattatttcatattgtgcatgaaaagcacctttacccact
gagccatcatctaactaatcactctttcctataataaatagtaatcattt
tcttttaaaataatcccatttatttattaattttgtttatgtggggtggg
gatgtgtgaatatcatggcatacatgtagatctcataggctccacctgtc
tctttccagtttatgatcccaagggtcaaattttgatctttgggttttat
tgcaaacattctattctgctgagctaccttacaagagctgtaaactctta
aataataaagtttaaaagaaattttcttagtttttcctagagggaaagtt
cattaaaatgatttcatagttagataattttatttttattgtatttctaa
tatattatagttcatgtagggaggaattatttaaaattcttcataattta

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_47280731_47281186
seq2: B6Ng01-107M16.g_64_519 (reverse)

seq1  TAATTTATGAAGAATTTTAAATAATTCCTCCCTACATGAACTATAATATA  50
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTATGAAGAATTTTAAATAATTCCTCCCTACATGAACTATAATATA  50

seq1  TTAGAAATACAATAAAAATAAAATTATCTAACTATGAAATCATTCTAATG  100
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTAGAAATACAATAAAAATAAAATTATCTAACTATGAAATCATTTTAATG  100

seq1  AACTTTCCCTCTAGGAAAAACTAAGAAAATTTCTTTTAAACTTTATTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTCCCTCTAGGAAAAACTAAGAAAATTTCTTTTAAACTTTATTATT  150

seq1  TAAGAGTTTACAGCTCTTGTAAGGTAGCTCAGCAGAATAGAATGTTTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGTTTACAGCTCTTGTAAGGTAGCTCAGCAGAATAGAATGTTTGCA  200

seq1  ATAAAACCCAAAGATCAAAATTTGACCCTTGGGATCATAAACTGGAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACCCAAAGATCAAAATTTGACCCTTGGGATCATAAACTGGAAAGA  250

seq1  GACAGGTGGAGCCTATGAGATCTACATGTATGCCATGATATTCACACATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGTGGAGCCTATGAGATCTACATGTATGCCATGATATTCACACATC  300

seq1  CCCACCCCACATAAACAAAATTAATAAATAAATGGGATTATTTTAAAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCCACATAAACAAAATTAATAAATAAATGGGATTATTTTAAAAGA  350

seq1  AAATGATTACTATTTATTATAGGAAAGAGTGATTAGTTAGATGATGGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATTACTATTTATTATAGGAAAGAGTGATTAGTTAGATGATGGCTC  400

seq1  AGTGGGTAAAGGTGCTTTTCATGCACAATATGAAATAATCAGTACCCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTAAAGGTGCTTTTCATGCACAATATGAAATAATCAGTACCCCCA  450

seq1  GAATTC  456
      ||||||
seq2  GAATTC  456