This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
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BAC name
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search by nearby gene name.
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Search Result
BAC
Clone Name
B6Ng01-107M16
Chromosome
15 (Build37)
Map Location
47,280,731 - 47,281,186
singlet/doublet
singlet
Overlap gene
none
Upstream gene
LOC100039438
,
LOC665130
,
LOC100039485
Downstream gene
LOC100039493
,
Csmd3
Link
Open Mouse BAC browser
Click to get alignment info.
name
LOC100039438
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100039438
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins
pseudo
: _no_value
name
LOC665130
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:665130
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins
pseudo
: _no_value
name
LOC100039485
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100039485
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein
pseudo
: _no_value
name
LOC100039493
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100039493
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins
pseudo
: _no_value
name
Csmd3
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:239420
MGI:2386403
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
Csmd3
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:124487116
GeneID:239420
MGI:2386403
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: CUB and Sushi multiple domains 3
transcript_id
: NM_001081391.1
name
Csmd3
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:124487117
GeneID:239420
MGI:2386403
definition
GO_component
: GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO_function
: GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO_process
: GO:0005975 - carbohydrate metabolism [Evidence IEA]
codon_start
: 1
product
: CUB and Sushi multiple domains 3
protein_id
: NP_001074860.1
name
LOC100039438
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100039438
definition
number
: 1
pseudo
: _no_value
name
LOC100039438
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100039438
definition
number
: 2
pseudo
: _no_value
name
LOC665130
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:665130
definition
number
: 1
pseudo
: _no_value
name
LOC100039485
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100039485
definition
number
: 1
pseudo
: _no_value
name
LOC100039485
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100039485
definition
number
: 2
pseudo
: _no_value
name
LOC100039493
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100039493
definition
number
: 1
pseudo
: _no_value
name
LOC100039493
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100039493
definition
number
: 2
pseudo
: _no_value
name
LOC100039493
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100039493
definition
number
: 3
pseudo
: _no_value
clone name
MSMg01-548L08
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-069A17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-271I18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-403J24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-524J08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-388M09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-515N05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-518B20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-425L07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-332O07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-384K21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-215J10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-216F19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-122D01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-178H17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-414E24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-362L11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-191N21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-339K08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-268N09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-050D21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-197J24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-462P08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-210M16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-426E16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-518I12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-292D03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-115H07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-397G20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-084B10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-110H12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-046A20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-273H23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-103E10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-482C14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-158G23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-311F01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-543C14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-164J12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-434B13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-509N10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-396P17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-444P16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-125N21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-418G23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-392M07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-102E17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-531M03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-351O21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-398M06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-068D06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-431P11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-164P07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-337K03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-437O14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-356F13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-318K06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-450H10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-133G16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-495F05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-337B01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-477P20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-496H04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-360L05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-528H02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-124D22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-307F08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-274K24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-123N15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-052F08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-415K03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-275L08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-452M09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-313A01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-208G17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-166M08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-084I17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-170J11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-145N17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-545I17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-377F04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-127N20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-412O07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-302J01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-300J14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-118K20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-475N24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-102H07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-440I17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-120G13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-390K14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-324E22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-454P06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-475N23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-421N04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-353F20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-116P10
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-348M14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-299I15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-500F03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-418P04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-385P02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-522P14
singlet/doublet
doublet
plural/unique
plural
clone name
B6Ng01-016A19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-012O03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-237I06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-161B13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-241G13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-204C12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-214H08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-226N01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-069J04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-162L24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-347J06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-110I20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-187E17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-255J22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-338A10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-143N03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-270G14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-237A04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-114K12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-163A14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-105G13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-289H09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-289J09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-011D16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-338F14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-272F08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-145J14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-005K07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-326I05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-341C05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-096J02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-228P23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-067K16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-117E15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-104F03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-297J09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-180O23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-167N13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-038B07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-318N24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-179L24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-240B09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-332F10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-061P04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-090M14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-222E13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-136I20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-153B24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-196L20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-313B03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-107M16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-228A10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-226M17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-001J10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-311F07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-263L02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-326C05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-203D14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-030K03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-247I08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-185I15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-229N21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-008L23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-333O23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-242N16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-116E18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-146J17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-233M21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-246G21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-087B02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-289P16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-075K09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-216P13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-230N03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-220C20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-250D23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-247N09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-251F13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-077L19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-141H23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-062O03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-295M05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-263H09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-183B08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-260C04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-191A13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-131M22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-187H21
singlet/doublet
singlet
plural/unique
unique
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B6Ng01-211J17
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doublet
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B6Ng01-290I20
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doublet
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B6Ng01-275J02
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singlet
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B6Ng01-110E18
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B6Ng01-196F13
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B6Ng01-338I19
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doublet
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B6Ng01-050J06
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doublet
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B6Ng01-039P07
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singlet
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B6Ng01-089L19
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doublet
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B6Ng01-052H03
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doublet
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B6Ng01-093O17
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B6Ng01-100D19
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doublet
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B6Ng01-303K15
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doublet
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B6Ng01-036M23
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doublet
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B6Ng01-224A01
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B6Ng01-283E13
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B6Ng01-196J14
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doublet
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B6Ng01-074K17
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B6Ng01-251F09
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doublet
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B6Ng01-171G15
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B6Ng01-070H13
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doublet
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B6Ng01-092F06
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B6Ng01-243E10
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singlet
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