BAC Information

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BAC

Clone NameB6Ng01-108G04
Chromosome15 (Build37)
Map Location 93,942,083 - 94,079,177
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043283, Glt8d3, Yaf2, Zcrb1, Pphln1, LOC627623, Prickle1, Zfp42-ps1, LOC100042627, LOC100042631
Downstream geneD630010B17Rik, Adamts20, Pus7l, Irak4, Twf1, Tmem117, LOC100043315, Nell2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108G04.bB6Ng01-108G04.g
ACCDH915585DH915586
length1,083996
definitionDH915585|Mus musculus domesticus DNA, BAC clone: B6Ng01-108G04, 5' end.DH915586|Mus musculus domesticus DNA, BAC clone: B6Ng01-108G04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,078,072 - 94,079,177)(93,942,083 - 93,942,901)
sequence
gaattcaaagcagggtgactgcttcaggtcaaaggggctttgccttgtgg
tattccaccagaggcggctcacagaggataccaggggttcggattctgta
cagctgtggaggatcccacccacagagagggggcctttgacaggcaggaa
aaattcctctagccatcctcaaggggtttacacaccctgccggtccacca
cccttcctggcctccctagcctgcagatttgggccatttgcccgcagtga
aggtcattttcccaggaacacccatcttcctcctaatacttgtaaccaaa
catgtgtttctccacagttctacaaaaaaaaccaaggtactgacccgctg
ctcagcgcactgtatcacatggcttccagctgtgtctctcctctcttaga
taagccctctggaacactttttagttcgtgctctcttgttggcagaggag
aattttaagaataatttactctcagaatctcacctagactcccaaatgac
taaactttgataaatcaactaacacctcagattccaacctatgactacat
ttttttttcttagagaatatatcttgatttaacagtatattcaacctaac
atgttgcttggtcccactatgtctgctaccattttctttaactctataga
ctgggtttttttttttttttctggaacagttaaaaaaaacctttcagcat
ctcacttctgtatcatttattattaaatgtaagtttttttcgtggagtgt
tcactgctgttaggtcttgaatgctgtatggtaaaagcaaagggttgtgt
ggtaatggcttaaggaacagtcactagactcaaatgccaggctttaagtc
cccattaaaccaaaatctgtgtatgtcacctcatgcaattttcctaccct
tacaagaatggagaagctaacataacacagttgggctaatttcttcatgg
tacttgacagagtcaggatacactattttaaacagattaagagagcagat
attgttctcaaacttatgtaataaacaatgaaaacacatactgggctgag
atgactcgtggcagctctgccactcaatgtcag
gaattcagtcagagtgcactcgtcttggtgaagctgtggagggggtagtt
tctgcacacactgtcaacatctaaactctgaccagaggaaggccttgcca
ttcccatgggtctgaggtattgggacccttgatatggctgtacttatgcc
agcaatacacagtcactgaggattttgtctgctccgatcttgggtagaca
ataccagcagacagactgaaactgtcctgagtatagttgttataagagat
ggcatgctatctgggaagacaaagatgagtcctcccatctctggcttggg
atggaggttaaggaaagtttcctgagttagagttcctattgctattatga
aacactgtgaccaaaagcaacttgtggagaaagggagcttattttactta
cggttccacataatagctcatcatcgacaaaaacagtgaggacaggagtt
caagcagggcaggaatggaggcaggagcctacagggctggaaagatggct
cagtggttaagagcaccaactgctcttccagaggtcctgagttcaaatcc
cagcaaccacatggtggctcacagccatctgtaatgggatctgatgcctt
cttctggtgtgtctgaagacagcaacagtgtacgtgtatatataataaat
aaatacatctttaaaaaaaagaacactgcttactggcttatacagaaagc
ttccttataaagcctaggaccagcagcccaggactcaaaccactcacaat
ggtatgggccctccccatcaatcactaattaagaaaatgctctacagctg
gatcttatgaaggtattttctcaattgaggttctctcctttcagatacta
gattgtgtcaaattgatataaaaaatagccaggacaataaccccttgtca
acatgtcatacaatatcactgttaaatcataacttttttgtttattccca
gatcacacatggatatcacatgctaataacatccaatttttaagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_94078072_94079177
seq2: B6Ng01-108G04.b_43_1125 (reverse)

seq1  CTGACATTTGAGTGGCAAGAGCTTGGCCCACCGAGTCATTCCCTCAGCCC  50
      |||||| ||||||||| ||||||  |||   ||||||||   ||||||||
seq2  CTGACA-TTGAGTGGC-AGAGCT--GCC--ACGAGTCAT---CTCAGCCC  41

seq1  AGTAATGGTGTTTTCATGTGTTTTATATACATAAGTTTGGAGAACAATAT  100
      ||||   |||||||||| || ||||| ||||||||||| |||||||||||
seq2  AGTA--TGTGTTTTCAT-TG-TTTAT-TACATAAGTTT-GAGAACAATAT  85

seq1  CTGCTTCCTCTATATCTGGTTTTAAAATAGTTGTAATCCCTGACTCTGTC  150
      |||||  ||||  |||||  |||||||||| ||||   ||||||||||||
seq2  CTGCT--CTCTTAATCTG--TTTAAAATAG-TGTA--TCCTGACTCTGTC  128

seq1  AAGTACCATTGAAGAAATTAGCCCAACTGTGTTATGTTAGCTTCTCCATT  200
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACCA-TGAAGAAATTAGCCCAACTGTGTTATGTTAGCTTCTCCATT  177

seq1  CTTGTAAGGGTAGGAAAATTGCATGAGGTGACATACACAGATTTTGGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAAGGGTAGGAAAATTGCATGAGGTGACATACACAGATTTTGGTTT  227

seq1  AATGGGGACTTAAAGCCTGGCATTTGAGTCTAGTGACTGTTCCTTAAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGGACTTAAAGCCTGGCATTTGAGTCTAGTGACTGTTCCTTAAGCC  277

seq1  ATTACCACACAACCCTTTGCTTTTACCATACAGCATTCAAGACCTAACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCACACAACCCTTTGCTTTTACCATACAGCATTCAAGACCTAACAG  327

seq1  CAGTGAACACTCCACGAAAAAAACTTACATTTAATAATAAATGATACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAACACTCCACGAAAAAAACTTACATTTAATAATAAATGATACAGA  377

seq1  AGTGAGATGCTGAAAGGTTTTTTTTAACTGTTCCAGAAAAAAAAAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGATGCTGAAAGGTTTTTTTTAACTGTTCCAGAAAAAAAAAAAAAA  427

seq1  ACCCAGTCTATAGAGTTAAAGAAAATGGTAGCAGACATAGTGGGACCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGTCTATAGAGTTAAAGAAAATGGTAGCAGACATAGTGGGACCAAG  477

seq1  CAACATGTTAGGTTGAATATACTGTTAAATCAAGATATATTCTCTAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATGTTAGGTTGAATATACTGTTAAATCAAGATATATTCTCTAAGAA  527

seq1  AAAAAAATGTAGTCATAGGTTGGAATCTGAGGTGTTAGTTGATTTATCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATGTAGTCATAGGTTGGAATCTGAGGTGTTAGTTGATTTATCAA  577

seq1  AGTTTAGTCATTTGGGAGTCTAGGTGAGATTCTGAGAGTAAATTATTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAGTCATTTGGGAGTCTAGGTGAGATTCTGAGAGTAAATTATTCTT  627

seq1  AAAATTCTCCTCTGCCAACAAGAGAGCACGAACTAAAAAGTGTTCCAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCTCCTCTGCCAACAAGAGAGCACGAACTAAAAAGTGTTCCAGAG  677

seq1  GGCTTATCTAAGAGAGGAGAGACACAGCTGGAAGCCATGTGATACAGTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTATCTAAGAGAGGAGAGACACAGCTGGAAGCCATGTGATACAGTGC  727

seq1  GCTGAGCAGCGGGTCAGTACCTTGGTTTTTTTTGTAGAACTGTGGAGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGCAGCGGGTCAGTACCTTGGTTTTTTTTGTAGAACTGTGGAGAAA  777

seq1  CACATGTTTGGTTACAAGTATTAGGAGGAAGATGGGTGTTCCTGGGAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTTTGGTTACAAGTATTAGGAGGAAGATGGGTGTTCCTGGGAAAA  827

seq1  TGACCTTCACTGCGGGCAAATGGCCCAAATCTGCAGGCTAGGGAGGCCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTCACTGCGGGCAAATGGCCCAAATCTGCAGGCTAGGGAGGCCAG  877

seq1  GAAGGGTGGTGGACCGGCAGGGTGTGTAAACCCCTTGAGGATGGCTAGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGTGGTGGACCGGCAGGGTGTGTAAACCCCTTGAGGATGGCTAGAG  927

seq1  GAATTTTTCCTGCCTGTCAAAGGCCCCCTCTCTGTGGGTGGGATCCTCCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTTCCTGCCTGTCAAAGGCCCCCTCTCTGTGGGTGGGATCCTCCA  977

seq1  CAGCTGTACAGAATCCGAACCCCTGGTATCCTCTGTGAGCCGCCTCTGGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTACAGAATCCGAACCCCTGGTATCCTCTGTGAGCCGCCTCTGGT  1027

seq1  GGAATACCACAAGGCAAAGCCCCTTTGACCTGAAGCAGTCACCCTGCTTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATACCACAAGGCAAAGCCCCTTTGACCTGAAGCAGTCACCCTGCTTT  1077

seq1  GAATTC  1106
      ||||||
seq2  GAATTC  1083

seq1: chr15_93942083_93942901
seq2: B6Ng01-108G04.g_68_886

seq1  GAATTCAGTCAGAGTGCACTCGTCTTGGTGAAGCTGTGGAGGGGGTAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCAGAGTGCACTCGTCTTGGTGAAGCTGTGGAGGGGGTAGTT  50

seq1  TCTGCACACACTGTCAACATCTAAACTCTGACCAGAGGAAGGCCTTGCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACACACTGTCAACATCTAAACTCTGACCAGAGGAAGGCCTTGCCA  100

seq1  TTCCCATGGGTCTGAGGTATTGGGACCCTTGATATGGCTGTACTTATGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCATGGGTCTGAGGTATTGGGACCCTTGATATGGCTGTACTTATGCC  150

seq1  AGCAATACACAGTCACTGAGGATTTTGTCTGCTCCGATCTTGGGTAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATACACAGTCACTGAGGATTTTGTCTGCTCCGATCTTGGGTAGACA  200

seq1  ATACCAGCAGACAGACTGAAACTGTCCTGAGTATAGTTGTTATAAGAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAGCAGACAGACTGAAACTGTCCTGAGTATAGTTGTTATAAGAGAT  250

seq1  GGCATGCTATCTGGGAAGACAAAGATGAGTCCTCCCATCTCTGGCTTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGCTATCTGGGAAGACAAAGATGAGTCCTCCCATCTCTGGCTTGGG  300

seq1  ATGGAGGTTAAGGAAAGTTTCCTGAGTTAGAGTTCCTATTGCTATTATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGTTAAGGAAAGTTTCCTGAGTTAGAGTTCCTATTGCTATTATGA  350

seq1  AACACTGTGACCAAAAGCAACTTGTGGAGAAAGGGAGCTTATTTTACTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGTGACCAAAAGCAACTTGTGGAGAAAGGGAGCTTATTTTACTTA  400

seq1  CGGTTCCACATAATAGCTCATCATCGACAAAAACAGTGAGGACAGGAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTCCACATAATAGCTCATCATCGACAAAAACAGTGAGGACAGGAGTT  450

seq1  CAAGCAGGGCAGGAATGGAGGCAGGAGCCTACAGGGCTGGAAAGATGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAGGGCAGGAATGGAGGCAGGAGCCTACAGGGCTGGAAAGATGGCT  500

seq1  CAGTGGTTAAGAGCACCAACTGCTCTTCCAGAGGTCCTGAGTTCAAATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTTAAGAGCACCAACTGCTCTTCCAGAGGTCCTGAGTTCAAATCC  550

seq1  CAGCAACCACATGGTGGCTCACAGCCATCTGTAATGGGATCTGATGCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAACCACATGGTGGCTCACAGCCATCTGTAATGGGATCTGATGCCTT  600

seq1  CTTCTGGTGTGTCTGAAGACAGCAACAGTGTACGTGTATATATAATAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGTGTGTCTGAAGACAGCAACAGTGTACGTGTATATATAATAAAT  650

seq1  AAATACATCTTTAAAAAAAAGAACACTGCTTACTGGCTTATACAGAAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACATCTTTAAAAAAAAGAACACTGCTTACTGGCTTATACAGAAAGC  700

seq1  TTCCTTATAAAGCCTAGGACCAGCAGCCCAGGACTCAAACCACTCACAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTATAAAGCCTAGGACCAGCAGCCCAGGACTCAAACCACTCACAAT  750

seq1  GGTATGGGCCCTCCCCATCAATCACTAATTAAGAAAATGCTCTACAGCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGGGCCCTCCCCATCAATCACTAATTAAGAAAATGCTCTACAGCTG  800

seq1  GATCTTATGAAGGTATTTT  819
      |||||||||||||||||||
seq2  GATCTTATGAAGGTATTTT  819