BAC Information

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BAC

Clone NameB6Ng01-108O09
Chromosome15 (Build37)
Map Location 76,680,138 - 76,808,603
singlet/doubletdoublet
Overlap geneZfp251, Zfp7, Commd5, Rpl8, Zfp647, 1110038F14Rik
Upstream geneLOC672572, Gsdmdc1, Naprt1, Eef1d, Tigd5, Pycrl, Tsta3, Zfp623, Eif2s3x-ps1, Zfp707, 2410075B13Rik, Mapk15, AA409316, K230010J24Rik, Scrib, 2410104I19Rik, Nrbp2, Eppk1, BC024139, Plec1, LOC671535, Grina, Spatc1, LOC100041269, Oplah, Exosc4, Gpaa1, Cyc1, Sharpin, Maf1, EG626280, Brp16, Tssk5, Bop1, Scx, Hsf1, Dgat1, Scrt1, LOC666497, EG666504, Fbxl6, Gpr172b, Adck5, Cpsf1, Slc39a4, Vps28, Nfkbil2, Cyhr1, Kifc2, Foxh1, Ppp1r16a, Gpt1, Mfsd3, Recql4, Lrrc14, Lrrc24, C030006K11Rik, D15Wsu169e
Downstream geneMb, Apol6, Rbm9, LOC100042318, Apol3, BC020489, BC085284, LOC624454, EG666639, 9030421J09Rik, EG626615, 2210421G13Rik, 9130218O11Rik, LOC666661, A330102K04Rik, EG545115, LOC666348, LOC666679, 2310016F22Rik, Apol2, Myh9, Txn2, Foxred2, Eif3s7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108O09.bB6Ng01-108O09.g
ACCDH915961DH915962
length1,1151,055
definitionDH915961|Mus musculus domesticus DNA, BAC clone: B6Ng01-108O09, 5' end.DH915962|Mus musculus domesticus DNA, BAC clone: B6Ng01-108O09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,680,138 - 76,681,280)(76,807,526 - 76,808,603)
sequence
gaattcttaaaggatcaaatgagaaaatagtctgaattaaaactggagga
ctcctttgatcatgggatgctaaagttacattttatgaccaacagttggc
cagacatttttaaaaagttactaaagttagaaagttggaagggtagagaa
cttaaagatttgcttgtagaggcccaggaagagcatgcgtgcaggcatga
gaagcagaaacagaaagctaagatcattctctccctctgtgaaccaaatg
cccctggaacaggacaaaggcttaggatcccaatgatgtcttccttatac
ctttctggtagcggaggccccgggatgcttacagcagactaggaatggag
gagaaatgataaggacaggagaaaacaaatgtggaaaggtgggacacttt
gagaaggaatgcctcatacattttaatgacaatttggggaagggaatcaa
agggtctatttttcactgacacctcatgagagcctttaatgacagttcct
atggaggaagaaatcatatttctttttgatcaggggaattccttggtcgt
aaccaaggtgaggggagaattctctcctccactttctgaaaaaaaaaaaa
actacaatgaatcttcaggataggcaaagaataacacagtttgtgttcca
gaagcaggaaccaacctataggggagagattggatatccaaattaggagc
tggaatgaacatttttcaggatgaagtcaaggtttcccttgatttgatga
ttccccggggctgaaaacaaatcaaacctaatgtttgggcccaagaagga
aactggtgtgacttgcagggtccttcctcccatccaaaccgagctgaaac
accctatacacgcgttagaagatgcgctatcctatcctattcccttagag
ggaagattagggtttaacctatcatggcgctcatgaaagacagacttcta
agtcctgtatgtcttccttcataccccaattctaccagtcaagagtatga
tgttcatatcatagtcagatctagagcattagcagatgtcaagtaaacac
cttgtgtccctctcagtcgaaccacagtggtcagctaacgaactgaaaga
tgctttgagctgcac
gaattcccatttctcaccaggggctagaacctcaggcattgccctcctct
ttctgagagaagggctgggggtgggggtgagctgtgcatcagatgggcaa
gacagaaaggggctccccaggcatctgtctctctctgctgctgctgctta
tctgggttgcctggtctgccctctgatttccttgggccttcagatgtgtt
ggctgttggaataggtagcaaccacctccttggagagccagacttcaagg
agagaaggcttcttctctttattcttaaaggtttttaattttcagtcagt
agcccctctccctataactcacggcacagacactgagagcaaacagctct
gcttctgggccaatgtgccctgtggcaaggtttgtgcctgtacggtggcc
cattgaatagttaaggctgctcaggccttcctaactccattgatgactgc
ttccatccataaagagaccggcttctgcctcaggtctggaaatgtcctgg
agatctggacagctggcctgagaagtgtccagtatgtcctcaccgtcatg
gcaggggacctcagggatgtcattgggcatcagtgttgcagggaggagat
tctgtgctacagcaaaagtgagacagagctgaccaagcagcagactatgg
tgctgagtggtttgggcatttgacatccaccagccatttgctcctcttag
gaggattctcacagcatagggaactgttaaagtcaggtcctggtccacaa
tgagctttttagcttccctatctaatatagcagactgtgccatgcagaca
ggatggccaaacagagaacactgggtcccaacgcttggatagataagcta
cagacctctgccctggtcccaggtctggatgaaaaggtaggatggtttaa
ttatatctgggtcagatggggcatgcgtcaggctccatttagttcctgaa
acttttttctttttttcctttgtttcagtcactttaaagctgtctctata
gggcagatatggctggctttttttagcaaccagaaacagagctgcattcc
accca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_76680138_76681280
seq2: B6Ng01-108O09.b_50_1164

seq1  GAATTCTTAAAGGATCAAATGAGAAAATAGTCTGAATTAAAACTGGAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAAGGATCAAATGAGAAAATAGTCTGAATTAAAACTGGAGGA  50

seq1  CTCCTTTGATCATGGGATGCTAAAGTTACATTTTATGACCAACAGTTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTGATCATGGGATGCTAAAGTTACATTTTATGACCAACAGTTGGC  100

seq1  CAGACATTTTTAAAAAGTTACTAAAGTTAGAAAGTTGGAAGGGTAGAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATTTTTAAAAAGTTACTAAAGTTAGAAAGTTGGAAGGGTAGAGAA  150

seq1  CTTAAAGATTTGCTTGTAGAGGCCCAGGAAGAGCATGCGTGCAGGCATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGATTTGCTTGTAGAGGCCCAGGAAGAGCATGCGTGCAGGCATGA  200

seq1  GAAGCAGAAACAGAAAGCTAAGATCATTCTCTCCCTCTGTGAACCAAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGAAACAGAAAGCTAAGATCATTCTCTCCCTCTGTGAACCAAATG  250

seq1  CCCCTGGAACAGGACAAAGGCTTAGGATCCCAATGATGTCTTCCTTATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGGAACAGGACAAAGGCTTAGGATCCCAATGATGTCTTCCTTATAC  300

seq1  CTTTCTGGTAGCGGAGGCCCCGGGATGCTTACAGCAGACTAGGAATGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGGTAGCGGAGGCCCCGGGATGCTTACAGCAGACTAGGAATGGAG  350

seq1  GAGAAATGATAAGGACAGGAGAAAACAAATGTGGAAAGGTGGGACACTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATGATAAGGACAGGAGAAAACAAATGTGGAAAGGTGGGACACTTT  400

seq1  GAGAAGGAATGCCTCATACATTTTAATGACAATTTGGGGAAGGGAATCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGAATGCCTCATACATTTTAATGACAATTTGGGGAAGGGAATCAA  450

seq1  AGGGTCTATTTTTCACTGACACCTCATGAGAGCCTTTAATGACAGTTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCTATTTTTCACTGACACCTCATGAGAGCCTTTAATGACAGTTCCT  500

seq1  ATGGAGGAAGAAATCATATTTCTTTTTGATCAGGGGAATTCCTTGGTCGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGAAGAAATCATATTTCTTTTTGATCAGGGGAATTCCTTGGTCGT  550

seq1  AACCAAGGTGAGGGGAGAATTCTCTCCTCCACTTTCTGAAAAAAAAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAGGTGAGGGGAGAATTCTCTCCTCCACTTTCTGAAAAAAAAAAAA  600

seq1  ACTACAATGAATCTTCAGGATAGGCAAAGAATAACACAGTTTGTGTTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAATGAATCTTCAGGATAGGCAAAGAATAACACAGTTTGTGTTCCA  650

seq1  GAAGCAGGAACCAACCTATAGGGGAGAGATTGGATATCCAAATTAGGAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGGAACCAACCTATAGGGGAGAGATTGGATATCCAAATTAGGAGC  700

seq1  TGGAATGAACATTTTTCAGGATGAAGTCAAGGTTTCCCTTGATTTGATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATGAACATTTTTCAGGATGAAGTCAAGGTTTCCCTTGATTTGATGA  750

seq1  TTCCCCGGGGCTGAAAAACAAATCAAACCTAATGTTTGGGCCCAAGAAGG  800
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTCCCCGGGGCTG-AAAACAAATCAAACCTAATGTTTGGGCCCAAGAAGG  799

seq1  AAACTGGTGTGACTTGCAGGGTCCTTCCTCCCATCCAAACCGAGCTGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGTGTGACTTGCAGGGTCCTTCCTCCCATCCAAACCGAGCTGAAA  849

seq1  CACCCTATACACGCGTTAGAAGAAGGCGCTATCCTATCCTATTCCCTTAG  900
      |||||||||||||||||||||| | |||||||||||||||||||||||||
seq2  CACCCTATACACGCGTTAGAAG-ATGCGCTATCCTATCCTATTCCCTTAG  898

seq1  AGGGAAGATTAGGGTTTAAACCTATCATGGCGCTCATGAAAGACAGACTT  950
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGGGAAGATTAGGGTTT-AACCTATCATGGCGCTCATGAAAGACAGACTT  947

seq1  CTTAAGTCCTGTATGTCTTCCTTCAATACCCCAATTCTACCAGTCAAGAA  1000
      | |||||||||||||||||||||| ||||||||||||||||||||||| |
seq2  C-TAAGTCCTGTATGTCTTCCTTC-ATACCCCAATTCTACCAGTCAAG-A  994

seq1  GTATGATGGTTCATATCAATTAGTCCAAGATCTTAGAGCAATTAAGCAGA  1050
      ||||||| ||||||||||  |||||  ||||| |||||||  | ||||||
seq2  GTATGAT-GTTCATATCA--TAGTC--AGATC-TAGAGCA--TTAGCAGA  1036

seq1  TTGTCAAAAGTAAACACCTTGTGGTCCCCTCCTCAGTCAGACCCCAACAG  1100
       ||||  ||||||||||||||| |||||   |||||||  |||   ||||
seq2  -TGTC--AAGTAAACACCTTGT-GTCCC--TCTCAGTCGAACC---ACAG  1077

seq1  TGGTTCAGGCTAACAGACTGAAAAGATGCCTTTGAGCTTGCAC  1143
      ||| ||| ||||||  |||| ||||||| |||||||| |||||
seq2  TGG-TCA-GCTAACGAACTG-AAAGATG-CTTTGAGC-TGCAC  1115

seq1: chr15_76807526_76808603
seq2: B6Ng01-108O09.g_67_1121 (reverse)

seq1  TGGGTGGGATATTGCAGGCTCTGGTTTTCTGTGTTTGCTAAAAAAAGCCC  50
      |||||||   | |||| ||||||  ||||  || ||||||||||||| ||
seq2  TGGGTGG---AATGCA-GCTCTG--TTTC--TGGTTGCTAAAAAAAG-CC  41

seq1  AGCCCCTTTAT-TCTGGCCCTATAGGAGACCAGCCTTTAAAGTGAACTGA  99
      ||||     || ||| |||||||| |||| ||| |||||||||| |||||
seq2  AGCC-----ATATCT-GCCCTATA-GAGA-CAG-CTTTAAAGTG-ACTGA  81

seq1  AACAGAGAAAAAAAGGAAAAAAGTTTTCAGGAAACTAAATGGAGCCCTGA  149
      |||| || |||||| |||||||| ||||||| |||||||||||| |||||
seq2  AACAAAGGAAAAAAAGAAAAAAG-TTTCAGG-AACTAAATGGAG-CCTGA  128

seq1  CGCATGCCCCATCTTGACCCAGATATAATTAAACCATCCTACCTTTTCAT  199
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CGCATGCCCCATC-TGACCCAGATATAATTAAACCATCCTACCTTTTCAT  177

seq1  CCAGACCCTGGGACCAGGGCAGAGGTCTGTAGCTTATCTATCCAAGCGTT  249
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGA-CCTGGGACCAGGGCAGAGGTCTGTAGCTTATCTATCCAAGCGTT  226

seq1  GGGACCCAGTGTTCTCTGTTTGGCCATCCTGTCTGCATGGCACAGTCTGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCCAGTGTTCTCTGTTTGGCCATCCTGTCTGCATGGCACAGTCTGC  276

seq1  TATATTAGATAGGGAAGCTAAAAAGCTCATTGTGGACCAGGACCTGACTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTAGATAGGGAAGCTAAAAAGCTCATTGTGGACCAGGACCTGACTT  326

seq1  TAACAGTTCCCTATGCTGTGAGAATCCTCCTAAGAGGAGCAAATGGCTGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTTCCCTATGCTGTGAGAATCCTCCTAAGAGGAGCAAATGGCTGG  376

seq1  TGGATGTCAAATGCCCAAACCACTCAGCACCATAGTCTGCTGCTTGGTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGTCAAATGCCCAAACCACTCAGCACCATAGTCTGCTGCTTGGTCA  426

seq1  GCTCTGTCTCACTTTTGCTGTAGCACAGAATCTCCTCCCTGCAACACTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGTCTCACTTTTGCTGTAGCACAGAATCTCCTCCCTGCAACACTGA  476

seq1  TGCCCAATGACATCCCTGAGGTCCCCTGCCATGACGGTGAGGACATACTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAATGACATCCCTGAGGTCCCCTGCCATGACGGTGAGGACATACTG  526

seq1  GACACTTCTCAGGCCAGCTGTCCAGATCTCCAGGACATTTCCAGACCTGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTCTCAGGCCAGCTGTCCAGATCTCCAGGACATTTCCAGACCTGA  576

seq1  GGCAGAAGCCGGTCTCTTTATGGATGGAAGCAGTCATCAATGGAGTTAGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAAGCCGGTCTCTTTATGGATGGAAGCAGTCATCAATGGAGTTAGG  626

seq1  AAGGCCTGAGCAGCCTTAACTATTCAATGGGCCACCGTACAGGCACAAAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCTGAGCAGCCTTAACTATTCAATGGGCCACCGTACAGGCACAAAC  676

seq1  CTTGCCACAGGGCACATTGGCCCAGAAGCAGAGCTGTTTGCTCTCAGTGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCACAGGGCACATTGGCCCAGAAGCAGAGCTGTTTGCTCTCAGTGT  726

seq1  CTGTGCCGTGAGTTATAGGGAGAGGGGCTACTGACTGAAAATTAAAAACC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCCGTGAGTTATAGGGAGAGGGGCTACTGACTGAAAATTAAAAACC  776

seq1  TTTAAGAATAAAGAGAAGAAGCCTTCTCTCCTTGAAGTCTGGCTCTCCAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGAATAAAGAGAAGAAGCCTTCTCTCCTTGAAGTCTGGCTCTCCAA  826

seq1  GGAGGTGGTTGCTACCTATTCCAACAGCCAACACATCTGAAGGCCCAAGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTGGTTGCTACCTATTCCAACAGCCAACACATCTGAAGGCCCAAGG  876

seq1  AAATCAGAGGGCAGACCAGGCAACCCAGATAAGCAGCAGCAGCAGAGAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGAGGGCAGACCAGGCAACCCAGATAAGCAGCAGCAGCAGAGAGA  926

seq1  GACAGATGCCTGGGGAGCCCCTTTCTGTCTTGCCCATCTGATGCACAGCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGATGCCTGGGGAGCCCCTTTCTGTCTTGCCCATCTGATGCACAGCT  976

seq1  CACCCCCACCCCCAGCCCTTCTCTCAGAAAGAGGAGGGCAATGCCTGAGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCACCCCCAGCCCTTCTCTCAGAAAGAGGAGGGCAATGCCTGAGG  1026

seq1  TTCTAGCCCCTGGTGAGAAATGGGAATTC  1078
      |||||||||||||||||||||||||||||
seq2  TTCTAGCCCCTGGTGAGAAATGGGAATTC  1055