BAC Information

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BAC

Clone NameB6Ng01-109K20
Chromosome15 (Build37)
Map Location 54,395,764 - 54,396,838
singlet/doubletsinglet
Overlap genenone
Upstream geneSamd12, EG665097, EG621631, Tnfrsf11b, LOC665280, EG383032, Colec10
Downstream geneMal2, Nov, LOC665302, LOC100039816, Enpp2, LOC100039911, LOC100039822, Taf2, 2600005O03Rik, Depdc6, Col14a1, Mrpl13, Mtbp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109K20.bB6Ng01-109K20.g
ACCDH916522DH916523
length1,1821,070
definitionDH916522|Mus musculus domesticus DNA, BAC clone: B6Ng01-109K20, 5' end.DH916523|Mus musculus domesticus DNA, BAC clone: B6Ng01-109K20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctagcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaagacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacactatgtactcactgataagtggatattagcccaaagcc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaaatgggaa
caaaacacccttggaaggagttacagagacaaaagtttggagctgagatg
aaaggatggaccatgtagagactgcctttatccaggggatccaccccata
attcagcatccaaacgctgacaccattgcatacactagcaagattttatt
gaaaggacccagatgtagctgtctcttgtgagactatgccggggtctaca
aacacagaagtggatgcccacagtcagctaatggatggatcacagggctc
ccaatggaggagctagagaaagtactcaaaggagctaaagggatctgcaa
cctaataggtgaatcaacattatgactaaccagtaccccgaactcttgac
tctagctgcaattgtacaaagatgtccagtcgggcatcactggaaagaag
gtcattggaactccaaccttaattgctcccaacagggagatcccaggtcc
aaaatggggatagtgagggtatgtggtattgg
gaattcacagttcaatccatctctgccttaagaggtaggcaactcccatc
ctccttctcctgactcagagcagcctgcagctcccacaactgggaatgtc
agagcctgctgttagcagttcccacccttgagtccatgggactcatctca
gtactatccaactactcacttaaataaaaataagtaaataaataaaaatc
taactctcaggctaataatcttaagtttctagtggattcttgcccaacac
gttggttcaccacctgttgtgggaaatattaaaaagaatggcaaagaata
cttgaaaatattaaaaattgatttccaagttaatacaaaaaaaggtaact
gaagaagacaccttatatcagactctggcctccactggcactcttacaca
cacacacacacagagagagagagagagagcgagagagagagagagagaga
gagagagaggaagaagaagaagaagaagaagaagaagaagaagaagaaga
agaagaagaagaagaagaagaagaagaagaagaaagagagagagagacac
gcatgctcacctcagaaacacacacaatccaaggcatcctgtgtttctca
catgtacatcctttctctgtattttctcagtgtagaattagattttcagg
tgtccctaacatttcctacctaaaccattccacatgccctttactgtaat
gtatttcccactctcaatcactttgaattcttttcatacatgaaaaaaga
attatgcttcacattcagttttgaaaacataatttttgttttatagtgca
tagacttgtacagggaccatatttatttcttccttttggtagtttaatga
tggcattcatctgtctactggcttaaattgctaccttctgtccagtcttg
gtcttcctatctctgttgctctgaataatgtgagttcttttcttgttact
tcaaagcttttcatcatgcttttaagcaagttgattagcatgtgaattgg
tttctcagtttcaatctgtagagttgttagctctgtgagataaaactttt
ttttattgaataccattcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_54395764_54396838
seq2: B6Ng01-109K20.g_67_1136

seq1  GAATTCACAGTTCAATCCATCTCTGCCTTAAGAGGTAGGCAACTCCCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGTTCAATCCATCTCTGCCTTAAGAGGTAGGCAACTCCCATC  50

seq1  CTCCTTCTCCTGACTCAGAGCAGCCTGCAGCTCCCACAACTGGGAATGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCTCCTGACTCAGAGCAGCCTGCAGCTCCCACAACTGGGAATGTC  100

seq1  AGAGCCTGCTGTTAGCAGTTCCCACCCTTGAGTCCATGGGACTCATCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTGCTGTTAGCAGTTCCCACCCTTGAGTCCATGGGACTCATCTCA  150

seq1  GTACTATCCAACTACTCACTTAAATAAAAATAAGTAAATAAATAAAAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTATCCAACTACTCACTTAAATAAAAATAAGTAAATAAATAAAAATC  200

seq1  TAACTCTCAGGCTAATAATCTTAAGTTTCTAGTGGATTCTTGCCCAACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCTCAGGCTAATAATCTTAAGTTTCTAGTGGATTCTTGCCCAACAC  250

seq1  GTTGGTTCACCACCTGTTGTGGGAAATATTAAAAAGAATGGCAAAGAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTTCACCACCTGTTGTGGGAAATATTAAAAAGAATGGCAAAGAATA  300

seq1  CTTGAAAATATTAAAAATTGATTTCCAAGTTAATACAAAAAAAGGTAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAAATATTAAAAATTGATTTCCAAGTTAATACAAAAAAAGGTAACT  350

seq1  GAAGAAGACACCTTATATCAGACTCTGGCCTCCACTGGCACTCTTACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGACACCTTATATCAGACTCTGGCCTCCACTGGCACTCTTACACA  400

seq1  CACACACACACAGAGAGAGAGAGAGAGAGCGAGAGAGAGAGAGAGAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACAGAGAGAGAGAGAGAGAGCGAGAGAGAGAGAGAGAGAGA  450

seq1  GAGAGAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA  500

seq1  AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAGAGAGAGAGACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAGAGAGAGAGACAC  550

seq1  GCATGCTCACCTCAGAAACACACACAATCCAAGGCATCCTGTGTTTCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCTCACCTCAGAAACACACACAATCCAAGGCATCCTGTGTTTCTCA  600

seq1  CATGTACATCCTTTCTCTGTATTTTCTCAGTGTAGAATTAGATTTTCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTACATCCTTTCTCTGTATTTTCTCAGTGTAGAATTAGATTTTCAGG  650

seq1  TGTCCCTAACATTTCCTACCTAAACCATTCCACATGCCCTTTACTGTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTAACATTTCCTACCTAAACCATTCCACATGCCCTTTACTGTAAT  700

seq1  GTATTTCCCACTCTCAATCACTTTGAATTCTTTTCATACATGAAAAAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTCCCACTCTCAATCACTTTGAATTCTTTTCATACATGAAAAAAGA  750

seq1  ATTATGCTTCACATTCAGTTTTGAAAACATAATTTTTGTTTTATAGTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGCTTCACATTCAGTTTTGAAAACATAATTTTTGTTTTATAGTGCA  800

seq1  TAGACTTGTACAGGGACCATATTTATTTCTTCCTTTTGGTAGTTTAATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTTGTACAGGGACCATATTTATTTCTTCCTTTTGGTAGTTTAATGA  850

seq1  TGGCATTCATCTGTCTACTGGCTTAAATTGCTACC-TCTGTCCAGTCTTG  899
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGGCATTCATCTGTCTACTGGCTTAAATTGCTACCTTCTGTCCAGTCTTG  900

seq1  GTCTTCCTATCTCTGTTGCTCTGAATAATGTGAGGTTTCTTTTCTTGTTA  949
      ||||||||||||||||||||||||||||||||||  ||||||||||||||
seq2  GTCTTCCTATCTCTGTTGCTCTGAATAATGTGAG--TTCTTTTCTTGTTA  948

seq1  CTTCAAAGCTTTTCATCATGGCTTTTAAGCAAGTTGATTAGCATGTGATT  999
      ||||||||||||||||||| |||||||||||||||||||||||||||| |
seq2  CTTCAAAGCTTTTCATCAT-GCTTTTAAGCAAGTTGATTAGCATGTGAAT  997

seq1  TGGTTTCTTCAGGTTTCAAATCTGTAGAGTTTGTTAGCTCTGTG-GGTAT  1048
      ||||||| ||| ||||| ||||||||||| |||||||||||||| | || 
seq2  TGGTTTC-TCA-GTTTC-AATCTGTAGAG-TTGTTAGCTCTGTGAGATAA  1043

seq1  AACTTTTTTTAATTGAATATCATTCAG  1075
      |||||||||| |||||||| |||||||
seq2  AACTTTTTTTTATTGAATACCATTCAG  1070