BAC Information

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BAC

Clone NameB6Ng01-109M24
Chromosome15 (Build37)17 (Build37)
Map Location 94,124,463 - 94,124,67242,054,010 - 42,054,556
singlet/doubletsingletsinglet
Overlap geneAdamts20
Upstream geneYaf2, Zcrb1, Pphln1, LOC627623, Prickle1, Zfp42-ps1, LOC100042627, LOC100042631, D630010B17Rik
Downstream genePus7l, Irak4, Twf1, Tmem117, LOC100043315, Nell2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109M24.bB6Ng01-109M24.g
ACCDH916615DH916616
length2101,014
definitionDH916615|Mus musculus domesticus DNA, BAC clone: B6Ng01-109M24, 5' end.DH916616|Mus musculus domesticus DNA, BAC clone: B6Ng01-109M24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(94,124,463 - 94,124,672)(42,054,010 - 42,054,556)
sequence
ccacatggcattcatcagccgtgataaaatactgcagtgactcttcctta
gaacttggggaaaaccgatctgtactagttcagagctccagagagaactg
ttttattttaagtccatccaaagcataaattactttgtgaatctttggtt
tggtagttttttaagcttaagggcatgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgt
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gactttgtttatataatggattacattgatggatttttgtcaattaaacc
atccctgcatccctggaataaaacctacttggtcaggatgaatgattgct
ttaatgtgttcttggattcggttagtgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcatagaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtacctgtccagaaatttgtccatttcttccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
tagggattttgtccctgtgccctctagtgagtctagctaaagggtttatc
tatcttgttgattttctcaaataaccaactccttgtttgggtaattcttt
gaatagttcttcttgttccattgggttgatttcaccccctgagttgatta
tttcctgccgtctactcctcttgggtgaatttgcttcctttttttccaga
gttttagatgtgctgtcaagctgctagtatgtgctctctcccggttcttc
ttggaggcacttcgagctatgagtttccctctagaaatgccttcatgtgt
cccataggtttggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_94124463_94124672
seq2: B6Ng01-109M24.b_57_266 (reverse)

seq1  ACACACACACACACACACACACACACACACACACATGCCCTTAAGCTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACATGCCCTTAAGCTTAA  50

seq1  AAAACTACCAAACCAAAGATTCACAAAGTAATTTATGCTTTGGATGGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTACCAAACCAAAGATTCACAAAGTAATTTATGCTTTGGATGGACT  100

seq1  TAAAATAAAACAGTTCTCTCTGGAGCTCTGAACTAGTACAGATCGGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAAACAGTTCTCTCTGGAGCTCTGAACTAGTACAGATCGGTTTT  150

seq1  CCCCAAGTTCTAAGGAAGAGTCACTGCAGTATTTTATCACGGCTGATGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAGTTCTAAGGAAGAGTCACTGCAGTATTTTATCACGGCTGATGAA  200

seq1  TGCCATGTGG  210
      ||||||||||
seq2  TGCCATGTGG  210

seq1: chr17_42054010_42054556
seq2: B6Ng01-109M24.g_537_1081 (reverse)

seq1  CCCAAACCTATGGGACACAATGAAAGCATTTCTAAGAGGGAAACTCATAG  50
      |||||||||||||||||| ||||| |||||||| ||||||||||||||||
seq2  CCCAAACCTATGGGACAC-ATGAAGGCATTTCT-AGAGGGAAACTCATAG  48

seq1  CTCTGAGTGCCTCCAAGAAGAAACGGGAGACAGCACATACTAGCAGCTTG  100
      |||  ||||||||||||||||| ||||||| |||||||||||||||||||
seq2  CTCGAAGTGCCTCCAAGAAGAACCGGGAGAGAGCACATACTAGCAGCTTG  98

seq1  ACAACACATCTAAAAGCTCTAGAAAAAAAGGAAGCAAATTCACCCAAGAG  150
      ||| ||||||||||| |||| |||||||||||||||||||||||||||||
seq2  ACAGCACATCTAAAA-CTCTGGAAAAAAAGGAAGCAAATTCACCCAAGAG  147

seq1  GAGTAGACGGCAGGAAATAATCAAACTCA-GGGGTGAAATCAACCAAGTG  199
      |||||||||||||||||||||| |||||| ||||||||||||||| | ||
seq2  GAGTAGACGGCAGGAAATAATC-AACTCAGGGGGTGAAATCAACCCAATG  196

seq1  GAAACAAGAAGAACTATTCAAAGAATTAACCAAACGAGGAGTTGGTTCTT  249
      | |||||||||||||||||||||||||| |||||| ||||||||||| ||
seq2  G-AACAAGAAGAACTATTCAAAGAATTACCCAAACAAGGAGTTGGTTATT  245

seq1  TGAGAAAATCAACAAGATAGATAAACCC-TTAGCTAGACTCACTAAAGGG  298
      |||||||||||||||||||||||||||| |||||||||||||||| ||||
seq2  TGAGAAAATCAACAAGATAGATAAACCCTTTAGCTAGACTCACTAGAGGG  295

seq1  CACAGGGACAAAAT-CCTAATTAACAAAATCAGAAATGAAAAGGGAGACA  347
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CACAGGGACAAAATCCCTAATTAACAAAATCAGAAATGAAAAGGGAGACA  345

seq1  TAACAACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTTCTACAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTTCTACAAA  395

seq1  AGGCTATACTCAACAAAACTGGAAAACCTGGACGAAATGGACAAATTTCT  447
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGGCTATACTCAACAAAACTGGAAAACCTGGAAGAAATGGACAAATTTCT  445

seq1  GGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCATCTAA  497
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGGTACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCATCTAA  495

seq1  ACAGTCCCATATCACCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCA  547
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ACAGTCCCATATCCCCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCA  545