BAC Information

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BAC

Clone NameB6Ng01-110E18
Chromosome15 (Build37)
Map Location 47,943,531 - 47,944,094
singlet/doubletsinglet
Overlap geneCsmd3
Upstream geneLOC665130, LOC100039485, LOC100039493
Downstream geneEG665146
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110E18.bB6Ng01-110E18.g
ACCDH916959DH916960
length9861,144
definitionDH916959|Mus musculus domesticus DNA, BAC clone: B6Ng01-110E18, 5' end.DH916960|Mus musculus domesticus DNA, BAC clone: B6Ng01-110E18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttactcttgtctccccaccaaaatcaatttatttactttgaaaa
ataaaaataaggattcctttataataataacaaaatatcttactaaataa
aattttatccaaaggaaaaatctgaggtaaatccatttgatatactgctc
aactatttctagatgaaaatatataaagacttataaattgcataattaaa
tacttccagaatggtctgtaatgtttatcagtcttcttttcttaattgac
aatgaaagctaggagaaagaagtacctttcaaggtcccaaatgtgagttc
ctgttcctaacagtttctagaaaggaaagaaaatagctgaaatcacagag
gtagtaaacaagaaaaaggaagcccattagggcacacagaaatctgtttt
tctatttaactgttgtttaatagaaaacaatacttgtatatgtccttagt
tcattcctattcaaacttctccattttctctccactccctcttataccgt
gacctctccatacacgtatgagtaaatgtaacttttatagacctgatgta
attgtcaactcagagggtcattggtgaataaagctcactgtttctagtcc
tttctgaacactggctggctggctcaactcagctgttctggctcaaatgc
cttcctaagctgactgattcaaaaggcttctcttggcttcccactgaatt
gctctgctgggtctcaaataactctcaatagttattctaatcttctggct
gtttcttattctttggcttcgactgactctgctgacctgcagggaactgc
atgaactcactaatgaactgagttccactctactgctcttaatagcgttt
ccctgagaggtaggaatatcctatctctaattttctgtcaggtctttctc
tgatttattgcttgtctgtccatcaatagatttcacattcaaacatggat
ccttccttctacctttatgtttggataaatatatgt
gaattctcacctgaggaataccaaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcataatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccatttttggtg
ggattgcaagcttgttcaaacactctggaaaacagtctggtggttcctca
gaaaattggacatagtactaccagaggatcccgcaatacctctcctgagc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctagaaagaacccagat
gtccatcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaatccaatcacaaa
agaactcacatgatatgcactcactgataagtggatattagcccagaaac
ttagaatacccaagatacacgatataaagcacatgaaattcaagaacgaa
gaccaaaatgtggacacattgccccttctcagaattgggaagaaaacacc
aagagaaggagtaacagagacaaactttggagctgagatgaaaggatgga
ccatttagagactgccatatccggggttccatcccataatcagcttccaa
acactgacaccattgcatgcactagcaagattttgctgaaaggacccaga
tatggctgtctcttgtgagactatgccggggcttagcaaacacagaggtg
gatgctcacagttagctatggatggatcacagcgcccccatgggaggagc
tagagaagtacccaggagctgaggcatttgcaatcctatagtgaacaaca
atatgactatcagtactcaggagtcgtgttctctagctgcatatgaatcg
aaagatggctagttggcatcattgaagagagccatttgtctgcaacttta
ttgcttcaagtaagggaaacgcagggccaagaaatggaatgcgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_47943531_47944094
seq2: B6Ng01-110E18.b_46_609 (reverse)

seq1  TCTGAGTTGACAATTACATCAGGTCTATAAAAGTTACATTTACTCATACG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTTGACAATTACATCAGGTCTATAAAAGTTACATTTACTCATACG  50

seq1  TGTATGGAGAGGTCACGGTATAAGAGGGAGTGGAGAGAAAATGGAGAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGGAGAGGTCACGGTATAAGAGGGAGTGGAGAGAAAATGGAGAAGT  100

seq1  TTGAATAGGAATGAACTAAGGACATATACAAGTATTGTTTTCTATTAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATAGGAATGAACTAAGGACATATACAAGTATTGTTTTCTATTAAAC  150

seq1  AACAGTTAAATAGAAAAACAGATTTCTGTGTGCCCTAATGGGCTTCCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTAAATAGAAAAACAGATTTCTGTGTGCCCTAATGGGCTTCCTTT  200

seq1  TTCTTGTTTACTACCTCTGTGATTTCAGCTATTTTCTTTCCTTTCTAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTTTACTACCTCTGTGATTTCAGCTATTTTCTTTCCTTTCTAGAA  250

seq1  ACTGTTAGGAACAGGAACTCACATTTGGGACCTTGAAAGGTACTTCTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTAGGAACAGGAACTCACATTTGGGACCTTGAAAGGTACTTCTTTC  300

seq1  TCCTAGCTTTCATTGTCAATTAAGAAAAGAAGACTGATAAACATTACAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGCTTTCATTGTCAATTAAGAAAAGAAGACTGATAAACATTACAGA  350

seq1  CCATTCTGGAAGTATTTAATTATGCAATTTATAAGTCTTTATATATTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTGGAAGTATTTAATTATGCAATTTATAAGTCTTTATATATTTTC  400

seq1  ATCTAGAAATAGTTGAGCAGTATATCAAATGGATTTACCTCAGATTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGAAATAGTTGAGCAGTATATCAAATGGATTTACCTCAGATTTTTC  450

seq1  CTTTGGATAAAATTTTATTTAGTAAGATATTTTGTTATTATTATAAAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGATAAAATTTTATTTAGTAAGATATTTTGTTATTATTATAAAGGA  500

seq1  ATCCTTATTTTTATTTTTCAAAGTAAATAAATTGATTTTGGTGGGGAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTATTTTTATTTTTCAAAGTAAATAAATTGATTTTGGTGGGGAGAC  550

seq1  AAGAGTAAGAATTC  564
      ||||||||||||||
seq2  AAGAGTAAGAATTC  564