BAC Information

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BAC

Clone NameB6Ng01-110K12
Chromosome15 (Build37)
Map Location 65,619,514 - 65,749,209
singlet/doubletdoublet
Overlap geneC920006C10Rik, Oc90
Upstream geneAdcy8, LOC268812, LOC100040790, LOC665836
Downstream geneF930104E18Rik, LOC100040835, Kcnq3, Lrrc6, LOC100040860, Tmem71, LOC100040881, Phf20l1, Tg, Sla, Wisp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110K12.bB6Ng01-110K12.g
ACCDH917219DH917220
length1,0981,057
definitionDH917219|Mus musculus domesticus DNA, BAC clone: B6Ng01-110K12, 5' end.DH917220|Mus musculus domesticus DNA, BAC clone: B6Ng01-110K12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,748,097 - 65,749,209)(65,619,514 - 65,620,583)
sequence
gaattctcatccaaggtatatgcaaataatttaaagcagagaggacaaga
aatcctccattgacttggtgagggttccgaagtcaaggacagaactccct
ctctttggtgtgtgggcatagaacagctagcccgcacattatctaatatc
tcatctttccttactaacctgctgaaacctgtaaacacgttacatttact
gatgagtgtattaatgagtttaaatgacttaaatgcaaattggggagatg
agttggatacagttgggtattagggcaatagcagctgtgcagaaagtgaa
aacgcatagctgtgccttcctccactctgctgccgcaagggggctctcct
aagaatcccttagaatggacctgacctgtgctttccctcaagaagaacct
gaactatagctggtactgtttgattttatgtctctgttctattccaatct
tgatgccctttcttgctctttcagccttgaagcaaaaatgtcttgagaat
gtctgcaagtctgtgtgagcacctaacagtaacttctggcaccaaacctt
caccctggtttcatttccagctcagctgtatttttcagaatccagcatgc
ccgagccaagtcatctgtagaagggaagggtttttctttggaagcagaga
acttttgtgtcctgtcaatctgtgtaatgcaacaaaggcagaagctttat
aatcaatggagtaacaccaggcttctctgcttgcctcagtgcaaaggaaa
gttatgatttgggtttgagaacctaccattatgcctgcagcagtcttgat
accaggaggactgggatgtaggcttcatattactgtgcatacagcccaca
agatgataaactgaaaaggcctgacacactccagagagctctcaatatgg
cactgtacaactgatgactacttggctacatacatctaatcagactatag
tgctacagcatcaagatctcttctaagtcccaagagagtgatgagacatt
tccagtagcatggagaatgtgagatctgactcctccgtctgactcctttc
tgtatgtccactgtgttctttcatcctttagaaacccagggcctcaga
gaattcctaactagccctgcatggtttctgtagacataagtacgggattt
ctaggcagcttcaaatgcacaatttcttctagtgttgggtaaagatttct
ttctgaatactagaatggtttgcctcatagctgtgtcaaacctttcatca
taatgtaaaggtcactttgacccctcaaataccaagtgtgttttattttg
tttgcacgttattctgtgtttcttactttacatttctgcttgattcctcc
agcctggaggtatattctctgcctatcttgttcatgatcattattgccag
ttttattattccttacactcatgttctattatttgactatttggaattag
caccgtgccaatcttctgggaaacgaaaggggagaaagataaaggacatc
aaaagatgagactgcatatggactgtcttggtaaaattcccattaaaatt
ctgcaaaatcatcgagcttttagttatgtgctagcatttagtttcctaga
gaggatgctgatagttacatttttaggatgtttgatttatttactgtgtc
cagtgagttttggatgaacttcggtgtcagattgctcaccgtgagtagga
ggtcaagagaaatgatcatgacttatctgtcaatttgttgctgtgcatca
cctggaatcaaagggagatactgatgtggacagaagttcagctctgaaat
ggtagctcttgctttttttctcctgatggtcagagccctcaaggtgtccg
agattcttcagtgggcaggagtgcttcttagatgccccgtgtctaaagta
gactaaatgtataagcagagactgtgacacagtcagtcactgtagtatgg
tattatgggtgcttttaggaaaagaaattaattttttataaaaaatcgtt
atttagatgctcagccagttaaccgttaagtgttttagctaatgaaatgc
agtgctttctacaagtgaagggtaaagaggatcgctttaatctctaggtt
ctagactctgcaagcagctcacagataatcatcaatgtgtatggtgtcac
ttggaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_65748097_65749209
seq2: B6Ng01-110K12.b_47_1144 (reverse)

seq1  TCTGA-GCCCTGGGGTTTTCTAAAGGATGACAGAACACAGTGGGACATAC  49
      ||||| ||||||||  |||||||||||||| |||||||||| ||||||||
seq2  TCTGAGGCCCTGGG--TTTCTAAAGGATGAAAGAACACAGT-GGACATAC  47

seq1  AGAAGAGAAGTCAAGACGGGAGGGAAGTCAAGATCTCCACA-TCTCCATG  98
      |||| || |||| |||| |||||  |||| |||||| |||| ||||||||
seq2  AGAA-AGGAGTC-AGAC-GGAGG--AGTC-AGATCT-CACATTCTCCATG  90

seq1  CTTACTGGAAATGTCTCCATCACCTCTCCTTGGGACCTTAGAAGAGAATC  148
      | |||||||||||||| ||||| |||| ||||||| |||||||||| |||
seq2  C-TACTGGAAATGTCT-CATCA-CTCT-CTTGGGA-CTTAGAAGAG-ATC  134

seq1  TTGATGCTGTAGCACTATAAGTCTGATTAGATGTATGTAGCCAAGTAGTC  198
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTGATGCTGTAGCACTAT-AGTCTGATTAGATGTATGTAGCCAAGTAGTC  183

seq1  ATCAGTTGTACAGTGCCATATTGAGAGCTCTCTGGAGTGTGTCAGGCCTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTTGTACAGTGCCATATTGAGAGCTCTCTGGAGTGTGTCAGGCCTT  233

seq1  TTCAGTTTATCATCTTGTGGGCTGTATGCACAGTAATATGAAGCCTACAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTTATCATCTTGTGGGCTGTATGCACAGTAATATGAAGCCTACAT  283

seq1  CCCAGTCCTCCTGGTATCAAGACTGCTGCAGGCATAATGGTAGGTTCTCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTCCTCCTGGTATCAAGACTGCTGCAGGCATAATGGTAGGTTCTCA  333

seq1  AACCCAAATCATAACTTTCCTTTGCACTGAGGCAAGCAGAGAAGCCTGGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAAATCATAACTTTCCTTTGCACTGAGGCAAGCAGAGAAGCCTGGT  383

seq1  GTTACTCCATTGATTATAAAGCTTCTGCCTTTGTTGCATTACACAGATTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTCCATTGATTATAAAGCTTCTGCCTTTGTTGCATTACACAGATTG  433

seq1  ACAGGACACAAAAGTTCTCTGCTTCCAAAGAAAAACCCTTCCCTTCTACA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGACACAAAAGTTCTCTGCTTCCAAAGAAAAACCCTTCCCTTCTACA  483

seq1  GATGACTTGGCTCGGGCATGCTGGATTCTGAAAAATACAGCTGAGCTGGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACTTGGCTCGGGCATGCTGGATTCTGAAAAATACAGCTGAGCTGGA  533

seq1  AATGAAACCAGGGTGAAGGTTTGGTGCCAGAAGTTACTGTTAGGTGCTCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAACCAGGGTGAAGGTTTGGTGCCAGAAGTTACTGTTAGGTGCTCA  583

seq1  CACAGACTTGCAGACATTCTCAAGACATTTTTGCTTCAAGGCTGAAAGAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACTTGCAGACATTCTCAAGACATTTTTGCTTCAAGGCTGAAAGAG  633

seq1  CAAGAAAGGGCATCAAGATTGGAATAGAACAGAGACATAAAATCAAACAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAAGGGCATCAAGATTGGAATAGAACAGAGACATAAAATCAAACAG  683

seq1  TACCAGCTATAGTTCAGGTTCTTCTTGAGGGAAAGCACAGGTCAGGTCCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGCTATAGTTCAGGTTCTTCTTGAGGGAAAGCACAGGTCAGGTCCA  733

seq1  TTCTAAGGGATTCTTAGGAGAGCCCCCTTGCGGCAGCAGAGTGGAGGAAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGGGATTCTTAGGAGAGCCCCCTTGCGGCAGCAGAGTGGAGGAAG  783

seq1  GCACAGCTATGCGTTTTCACTTTCTGCACAGCTGCTATTGCCCTAATACC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGCTATGCGTTTTCACTTTCTGCACAGCTGCTATTGCCCTAATACC  833

seq1  CAACTGTATCCAACTCATCTCCCCAATTTGCATTTAAGTCATTTAAACTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGTATCCAACTCATCTCCCCAATTTGCATTTAAGTCATTTAAACTC  883

seq1  ATTAATACACTCATCAGTAAATGTAACGTGTTTACAGGTTTCAGCAGGTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATACACTCATCAGTAAATGTAACGTGTTTACAGGTTTCAGCAGGTT  933

seq1  AGTAAGGAAAGATGAGATATTAGATAATGTGCGGGCTAGCTGTTCTATGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGGAAAGATGAGATATTAGATAATGTGCGGGCTAGCTGTTCTATGC  983

seq1  CCACACACCAAAGAGAGGGAGTTCTGTCCTTGACTTCGGAACCCTCACCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACACCAAAGAGAGGGAGTTCTGTCCTTGACTTCGGAACCCTCACCA  1033

seq1  AGTCAATGGAGGATTTCTTGTCCTCTCTGCTTTAAATTATTTGCATATAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATGGAGGATTTCTTGTCCTCTCTGCTTTAAATTATTTGCATATAC  1083

seq1  CTTGGATGAGAATTC  1113
      |||||||||||||||
seq2  CTTGGATGAGAATTC  1098

seq1: chr15_65619514_65620583
seq2: B6Ng01-110K12.g_69_1125

seq1  GAATTCCTAACTAGCCCTGCATGGTTTCTGTAGACATAAGTACGGGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAACTAGCCCTGCATGGTTTCTGTAGACATAAGTACGGGATTT  50

seq1  CTAGGCAGCTTCAAATGCACAATTTCTTCTAGTGTTGGGTAAAGATTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCAGCTTCAAATGCACAATTTCTTCTAGTGTTGGGTAAAGATTTCT  100

seq1  TTCTGAATACTAGAATGGTTTGCCTCATAGCTGTGTCAAACCTTTCATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAATACTAGAATGGTTTGCCTCATAGCTGTGTCAAACCTTTCATCA  150

seq1  TAATGTAAAGGTCACTTTGACCCCTCAAATACCAAGTGTGTTTTATTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTAAAGGTCACTTTGACCCCTCAAATACCAAGTGTGTTTTATTTTG  200

seq1  TTTGCACGTTATTCTGTGTTTCTTACTTTACATTTCTGCTTGATTCCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCACGTTATTCTGTGTTTCTTACTTTACATTTCTGCTTGATTCCTCC  250

seq1  AGCCTGGAGGTATATTCTCTGCCTATCTTGTTCATGATCATTATTGCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGAGGTATATTCTCTGCCTATCTTGTTCATGATCATTATTGCCAG  300

seq1  TTTTATTATTCCTTACACTCATGTTCTATTATTTGACTATTTGGAATTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTATTCCTTACACTCATGTTCTATTATTTGACTATTTGGAATTAG  350

seq1  CACCGTGCCAATCTTCTGGGAAACGAAAGGGGAGAAAGATAAAGGACATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGTGCCAATCTTCTGGGAAACGAAAGGGGAGAAAGATAAAGGACATC  400

seq1  AAAAGATGAGACTGCATATGGACTGTCTTGGTAAAATTCCCATTAAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATGAGACTGCATATGGACTGTCTTGGTAAAATTCCCATTAAAATT  450

seq1  CTGCAAAATCATCGAGCTTTTAGTTATGTGCTAGCATTTAGTTTCCTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAAATCATCGAGCTTTTAGTTATGTGCTAGCATTTAGTTTCCTAGA  500

seq1  GAGGATGCTGATAGTTACATTTTTAGGATGTTTGATTTATTTACTGTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATGCTGATAGTTACATTTTTAGGATGTTTGATTTATTTACTGTGTC  550

seq1  CAGTGAGTTTTGGATGAACTTCGGTGTCAGATTGCTCACCGTGAGTAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGTTTTGGATGAACTTCGGTGTCAGATTGCTCACCGTGAGTAGGA  600

seq1  GGTCAAGAGAAATGATCATGACTTATCTGTCAATTTGTTGCTGTGCATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAGAGAAATGATCATGACTTATCTGTCAATTTGTTGCTGTGCATCA  650

seq1  CCTGGAATCAAAGGGAGATACTGATGTGGACAGAAGTTCAGCTCTGAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAATCAAAGGGAGATACTGATGTGGACAGAAGTTCAGCTCTGAAAT  700

seq1  GGTAGCTCTTGCTTTTTTTCTCCTGATGGTCAGAGCCCTCAAGGTGTCCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCTCTTGCTTTTTTTCTCCTGATGGTCAGAGCCCTCAAGGTGTCCG  750

seq1  AGATTCTTCAGTGGGCAGGAGTGCTTCTTAGATGCCCCGTGTCTAAAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCTTCAGTGGGCAGGAGTGCTTCTTAGATGCCCCGTGTCTAAAGTA  800

seq1  GACTAAATGTATAAGCAGAGACTGTGACACAGTCAGTCACTGTAGTATGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAATGTATAAGCAGAGACTGTGACACAGTCAGTCACTGTAGTATGG  850

seq1  TATTATGGGTGCTTTTAGGAAAAGAAATTAATTTTTTATAAAAAAATCGT  900
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TATTATGGGTGCTTTTAGGAAAAGAAATTAATTTTTTAT-AAAAAATCGT  899

seq1  TATTTAGATGCTCAGCCAGTTAACCGTTAAGTGTTTTAGCTAATGAAATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGATGCTCAGCCAGTTAACCGTTAAGTGTTTTAGCTAATGAAATG  949

seq1  CAGTGCTTTTCTACAAAAGTGAAGGGTTAAAGAGGATCGCTTTAATCTCT  1000
      |||||| |||||||  |||||||||| |||||||||||||||||||||||
seq2  CAGTGC-TTTCTAC--AAGTGAAGGG-TAAAGAGGATCGCTTTAATCTCT  995

seq1  AGGTTCTAGAACTCTGCAAGCAGCTCACAGATAAATCATTCTATTGTTGT  1050
      ||||||||| |||||||||||||||||||||| ||||| || |    |||
seq2  AGGTTCTAG-ACTCTGCAAGCAGCTCACAGAT-AATCA-TCAA----TGT  1038

seq1  TTTTGTTGTTCACTTGGAAT  1070
       | || || |||||||||||
seq2  GTATGGTG-TCACTTGGAAT  1057