BAC Information

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BAC

Clone NameB6Ng01-113O15
Chromosome15 (Build37)
Map Location 54,087,322 - 54,088,329
singlet/doubletsinglet
Overlap geneTnfrsf11b
Upstream geneExt1, Samd12, EG665097, EG621631
Downstream geneLOC665280, EG383032, Colec10, Mal2, Nov, LOC665302, LOC100039816, Enpp2, LOC100039911, LOC100039822, Taf2, 2600005O03Rik, Depdc6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113O15.bB6Ng01-113O15.g
ACCDH919580DH919581
length1,0051,035
definitionDH919580|Mus musculus domesticus DNA, BAC clone: B6Ng01-113O15, 5' end.DH919581|Mus musculus domesticus DNA, BAC clone: B6Ng01-113O15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccataggtataggcaggcggatctttgtgagttcaaggctagcct
agtctacagagtaagttccaggacagccaggactgtcaacacagagaaac
tctgtatcaaaacaaacaaacaaacaaacataaaatgcaaaatgtgagtt
tgtgttcttctcagagaaggctatgctgagatgataagaggacagggtgg
catgctgtgtatagttacctattccacacttttgcgtggcttctctgttt
ccggaacacacgttgtcatgtgttgcatttcctttctgaattagcaggag
gccaaatgtgctgcagttcgtgtgttttatacagggtgctttcgatgaag
tctcacctgagaagaacccatctggacattttttgcaaactgtgtttcgc
tctggggttcctgttggaaaacacccagaaatttagcaccttcttcccca
atcctttctctgcagacaataacttagcacagttctcgacagttttcacc
aagtgtttactgctactgtgtattgcagggaactttcagagtttccattt
ttcacttcattagacagagataacaaaacttctatagtcatcccctcagg
ctctttccccttcttgtaatacccacacaagtttgttgcgctattaccta
caaagacgctcctgaaatgggagatggaaggagaggcgggtggggtactc
attagtgctgcctctgacaaagtgccagtaaggcttgtcaaccgtattct
ttgcacaattattcctggaaaaaccatcaagataagtgctgggtgtctgc
tttactgtctgtcactctttgaagtcagcacccattcaatgtgcatcgtt
aaattccaatcatttctttacggaagatctttctctcctagctcctaaat
tggaaccatgctaaccttgagaaacacacaattaccaattaaaactctac
agtggtggaaagttaacggctgactccagtctatctcccaagttagctac
taatt
gaattcttaactgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaaccaaaacaaccctgagat
tccacctcacactagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagctggtacaaccactctggaagtcaatctagaggttcctca
gaaaattgggcataatactactggaagatccagcaatacctctcctgggc
atatacccaaaagaagttccaactggtaataagaacacatgttccactat
gttcatagcagccttatttaaaatagccagaagctggaaagaacccagat
gttcctcaacagaagaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacaatcacaaa
ggaactcccacaatatgtactcactgataagtggatattagctcagaaac
ttaggatacccaagatataagatacaatttgctaaacgcatgaaattcaa
gaagaacgaagaccaaagtgtggacactttaccctttcttagatatggga
acaaaaacacccatggaaggagttacagagacaaaatttggagctgtgac
gaaaggatggaccatctagtgattgccatatgcagggatccatcccataa
ttcagcttccaaacgctgacaccattgcatacactagcaagattttgctg
aaaggacctagaatatagctgtctcttgtgagactatgccggggcctagc
aaacacagaagtggatgatcacagtcagctattggatgggtcacacggcc
ccaatggaaggagcaagagaatacccaagagctaaagggactgcaaccct
ataggtgtacaactatattaactaccagtatcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_54087322_54088329
seq2: B6Ng01-113O15.b_49_1052

seq1  GAATTCCATAGGTATAGGCAGGCGGATCTTTGTGAGTTCAAGGCTAGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAGGTATAGGCAGGCGGATCTTTGTGAGTTCAAGGCTAGCCT  50

seq1  AGTCTACAGAGTAAGTTCCAGGACAGCCAGGACTGTCAACACAGAGAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTACAGAGTAAGTTCCAGGACAGCCAGGACTGTCAACACAGAGAAAC  100

seq1  TCTGTATCAAAACAAACAAACAAACAAACATAAAATGCAAAATGTGAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATCAAAACAAACAAACAAACAAACATAAAATGCAAAATGTGAGTT  150

seq1  TGTGTTCTTCTCAGAGAAGGCTATGCTGAGATGATAAGAGGACAGGGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCTTCTCAGAGAAGGCTATGCTGAGATGATAAGAGGACAGGGTGG  200

seq1  CATGCTGTGTATAGTTACCTATTCCACACTTTTGCGTGGCTTCTCTGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGTGTATAGTTACCTATTCCACACTTTTGCGTGGCTTCTCTGTTT  250

seq1  CCGGAACACACGTTGTCATGTGTTGCATTTCCTTTCTGAATTAGCAGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGAACACACGTTGTCATGTGTTGCATTTCCTTTCTGAATTAGCAGGAG  300

seq1  GCCAAATGTGCTGCAGTTCGTGTGTTTTATACAGGGTGCTTTCGATGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAATGTGCTGCAGTTCGTGTGTTTTATACAGGGTGCTTTCGATGAAG  350

seq1  TCTCACCTGAGAAGAACCCATCTGGACATTTTTTGCAAACTGTGTTTCGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCTGAGAAGAACCCATCTGGACATTTTTTGCAAACTGTGTTTCGC  400

seq1  TCTGGGGTTCCTGTTGGAAAACACCCAGAAATTTAGCACCTTCTTCCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGTTCCTGTTGGAAAACACCCAGAAATTTAGCACCTTCTTCCCCA  450

seq1  ATCCTTTCTCTGCAGACAATAACTTAGCACAGTTCTCGACAGTTTTCACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTCTCTGCAGACAATAACTTAGCACAGTTCTCGACAGTTTTCACC  500

seq1  AAGTGTTTACTGCTACTGTGTATTGCAGGGAACTTTCAGAGTTTCCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTTACTGCTACTGTGTATTGCAGGGAACTTTCAGAGTTTCCATTT  550

seq1  TTCACTTCATTAGACAGAGATAACAAAACTTCTATAGTCATCCCCTCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTCATTAGACAGAGATAACAAAACTTCTATAGTCATCCCCTCAGG  600

seq1  CTCTTTCCCCTTCTTGTAATACCCACACAAGTTTGTTGCGCTATTACCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCCCCTTCTTGTAATACCCACACAAGTTTGTTGCGCTATTACCTA  650

seq1  CAAAGACGCTCCTGAAATGGGAGATGGAAGGAGAGGCGGGTGGGGTACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACGCTCCTGAAATGGGAGATGGAAGGAGAGGCGGGTGGGGTACTC  700

seq1  ATTAGTGCTGCCTCTGACAAAGTGCCAGTAAGGCTTGTCAACCGTATTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTGCTGCCTCTGACAAAGTGCCAGTAAGGCTTGTCAACCGTATTCT  750

seq1  TTGCACAATTATTCCTGGAAAAACCATCAAGATAAGTGCTGTGTGTCTGC  800
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTGCACAATTATTCCTGGAAAAACCATCAAGATAAGTGCTGGGTGTCTGC  800

seq1  TTTACTGTCTGTCACTCTTTGAAGTCAGCACCCATTCAATGTTGCATCGT  850
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTTACTGTCTGTCACTCTTTGAAGTCAGCACCCATTCAATG-TGCATCGT  849

seq1  TAAATTCCAATCATTTC-TTACGGAAGATCTTTCTCTCCTAGCTCCTAAT  899
      ||||||||||||||||| ||||||||||||||||||||||||||||||| 
seq2  TAAATTCCAATCATTTCTTTACGGAAGATCTTTCTCTCCTAGCTCCTAAA  899

seq1  TGGGAACCATGCTAACCTTGAGAAACACACAATTAC--AATAAAACTCTT  947
      | ||||||||||||||||||||||||||||||||||  | |||||||| |
seq2  TTGGAACCATGCTAACCTTGAGAAACACACAATTACCAATTAAAACTC-T  948

seq1  ACAGGTGGTGGTAAAGTTGACTGCTGACTCCAGTCATATCCCCAAGGTTG  997
      ||| ||||||| |||||| || ||||||||||||| |||| || | ||| 
seq2  ACA-GTGGTGG-AAAGTTAACGGCTGACTCCAGTC-TATCTCCCAAGTT-  994

seq1  AGCTACATAAT  1008
      |||||| ||||
seq2  AGCTAC-TAAT  1004