BAC Information

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BAC

Clone NameB6Ng01-114C11
Chromosome15 (Build37)
Map Location 57,159,646 - 57,302,988
singlet/doubletdoublet
Overlap geneBC026439
Upstream geneHas2, EG594843, LOC435442, LOC100040067, LOC100039984
Downstream geneZhx2, Derl1, Wdr67, BC030396, 9130401M01Rik, Zhx1, Atad2, LOC665244, 2410187C16Rik, Fbxo32, 8230402K04Rik, Anxa13, LOC100040231, D15Ertd621e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114C11.bB6Ng01-114C11.g
ACCDH919751DH919752
length1,1111,107
definitionDH919751|Mus musculus domesticus DNA, BAC clone: B6Ng01-114C11, 5' end.DH919752|Mus musculus domesticus DNA, BAC clone: B6Ng01-114C11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,301,866 - 57,302,988)(57,159,646 - 57,160,772)
sequence
gaattctgggttgctgaggatgtaagttaggccaagaactactattataa
aagaactgcttggatagacattctagaattaggactgacctatggaatac
acccatagcaaagaaaggcaacaggattgagaagatagtggcattgatcc
acttaggatggctgagctcatctcccctaagcctgggagattccagaaaa
cagtattttcggactttagagaagaattttagagacaaagcaggaagatg
cttttagtgctagcactgaaaagaaataatatgagcagagcctgaagagc
cttgacctgtctgtaaatatgattgacatattgtttttaaataatgagac
acattggtttagatttgagctctgaagtaagaatgaacttctattgaggg
agtgaaggacctgtctataaactgggttttgatgatttaattagttgatg
ttattgcttgaatgttttcctccttcagtattaatatgttggaaatataa
tgaataaatcaagtgatgagaagaaggctaaatagatagtgtttatgtca
ctaggtggggtcatgataagtagattgatgtttgtagtatgagctttgct
atttgtatccttctgcattgtgaagacaaaatattcaccttttccccctg
tcttcctctgcaatgggaagacatagtatttgtgttttattttcctgtct
gcctcgcaccatgtgaggatatcagattccagaagtatgagaaatacttt
tgcacttataataaatttcccagtctccggcatcctatcatcacaggaca
aagcagaacaaggcagtagagttgtagaagaaaaaaaattcagatcactc
acctgatgcgattctagtagggggaccgcctccagcatgtgcttggggtt
aagtgattgtagaaaggacactgatgtgttgtagcctttcagtgacggaa
gacttgtaggacaggcagggtggagggtgacatggagcacaaatgaagat
ggacagcagaattggctgtagaagggaagaactagtagtgagtgactcca
ggtatagaagaacaatttttagtcatccaaggacaatgagcattggtgtg
acttggaagaa
gaattccctcacatgagacatttaaagtattcaaatggttaaaaaaaata
aagcatgccagtagccactggttactataactgaaaaacaaaagaaaaat
tttttcagtaaatatagaaattgagtgtcatgtgaaatttttctagagct
atgttgttataaatataaaatgttgttataaatattaaagctactagact
gaagatttttctatgttgccaacttttatgtcattcttaataaaagcaaa
ggcagtgtggtagaaattacctgagtcatcttccagttttgcactgaaca
ttatcattatcatttgagatattaatgcatgagtaccatgcttacatagt
tcccatccctccttctttgaatgtcatcatgcaggttctagcagtggcag
ttggaccccatgactgttgttgcagctttagacagttgctctggagcaga
gggtctaaattttaatgtgaagcacaagggttagcctgggaatttgtatt
ccagagtagagtctgaggcaagcaagccctccatggcacagcgcactgcc
cttcagtcaactgtatgagcatcaaaactctaagatcaggtctagatgct
ttactacaagccaagcaatgccctgtatgttagtggttaacaacacagag
caaggaaggtctgtgttcctatgaagtttatataatattactgagagcca
atcaacaaatcaataaatatagccaaaatgaaaagtgcacttagacaaaa
tgaaatctccaggaacacagatttgatttgtctctcaattggatatattc
ttcttcaatgctgtttgaatcctacagggaaaaaagtaattatgattttc
ctgatggaaatccaagatcctttgcatgcattaaaccaagtctgttgatg
aagataaagagatgcaattaagaatgtcaaggtaggtgtaaggacagatg
attatatagttgttagggatgtgcttgtttaattaatagtggtgtgcatc
agtaaaatgattcagtaacactagtagtcagtagggtccagtgtaagctg
atcccttccctcaaagctgtgcctaagtcaatagttgcaccactatggat
ggatgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_57301866_57302988
seq2: B6Ng01-114C11.b_44_1154 (reverse)

seq1  TTCTTCCAAGTCACACCAATGCTCCTTTGTCCTTGAATGACTAAAAAAAT  50
      ||||||||||||||||||||||| | ||||||||| ||||||  ||||||
seq2  TTCTTCCAAGTCACACCAATGCT-CATTGTCCTTGGATGACT--AAAAAT  47

seq1  TG-TCTTCTAATACCTGGAGTCACTCACTTACTAGTTTCTTCCCTTCTAC  99
      || |||||| |||||||||||||||||| |||||| ||||||||||||||
seq2  TGTTCTTCT-ATACCTGGAGTCACTCAC-TACTAG-TTCTTCCCTTCTAC  94

seq1  AGCCAATTCTGCTGGTCCATCTTTCATTTGTGCTTCCATGTCCACCCTCC  149
      ||||||||||||| ||||||| ||||||||||| ||||||| ||||||||
seq2  AGCCAATTCTGCT-GTCCATC-TTCATTTGTGC-TCCATGT-CACCCTCC  140

seq1  ACCCCTGCCTGTCCTACAAGTCTTCCGTCACTTGAAAGGCTACAACACAT  199
      | ||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  A-CCCTGCCTGTCCTACAAGTCTTCCGTCAC-TGAAAGGCTACAACACAT  188

seq1  CAGTGTCCTTTCTACAATCACTTAACCCCAAGCACATTGCTGGAGGCGGT  249
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CAGTGTCCTTTCTACAATCACTTAACCCCAAGCACA-TGCTGGAGGCGGT  237

seq1  CCCCCTACTAGAATCGCATCAGGTGAGTGATCTGAATTTTTTTTCTTCTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTACTAGAATCGCATCAGGTGAGTGATCTGAATTTTTTTTCTTCTA  287

seq1  CAACTCTACTGCCTTGTTCTGCTTTGTCCTGTGATGATAGGATGCCGGAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTACTGCCTTGTTCTGCTTTGTCCTGTGATGATAGGATGCCGGAG  337

seq1  ACTGGGAAATTTATTATAAGTGCAAAAGTATTTCTCATACTTCTGGAATC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGAAATTTATTATAAGTGCAAAAGTATTTCTCATACTTCTGGAATC  387

seq1  TGATATCCTCACATGGTGCGAGGCAGACAGGAAAATAAAACACAAATACT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATCCTCACATGGTGCGAGGCAGACAGGAAAATAAAACACAAATACT  437

seq1  ATGTCTTCCCATTGCAGAGGAAGACAGGGGGAAAAGGTGAATATTTTGTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTCCCATTGCAGAGGAAGACAGGGGGAAAAGGTGAATATTTTGTC  487

seq1  TTCACAATGCAGAAGGATACAAATAGCAAAGCTCATACTACAAACATCAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAATGCAGAAGGATACAAATAGCAAAGCTCATACTACAAACATCAA  537

seq1  TCTACTTATCATGACCCCACCTAGTGACATAAACACTATCTATTTAGCCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTTATCATGACCCCACCTAGTGACATAAACACTATCTATTTAGCCT  587

seq1  TCTTCTCATCACTTGATTTATTCATTATATTTCCAACATATTAATACTGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCATCACTTGATTTATTCATTATATTTCCAACATATTAATACTGA  637

seq1  AGGAGGAAAACATTCAAGCAATAACATCAACTAATTAAATCATCAAAACC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAAAACATTCAAGCAATAACATCAACTAATTAAATCATCAAAACC  687

seq1  CAGTTTATAGACAGGTCCTTCACTCCCTCAATAGAAGTTCATTCTTACTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTATAGACAGGTCCTTCACTCCCTCAATAGAAGTTCATTCTTACTT  737

seq1  CAGAGCTCAAATCTAAACCAATGTGTCTCATTATTTAAAAACAATATGTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTCAAATCTAAACCAATGTGTCTCATTATTTAAAAACAATATGTC  787

seq1  AATCATATTTACAGACAGGTCAAGGCTCTTCAGGCTCTGCTCATATTATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATATTTACAGACAGGTCAAGGCTCTTCAGGCTCTGCTCATATTATT  837

seq1  TCTTTTCAGTGCTAGCACTAAAAGCATCTTCCTGCTTTGTCTCTAAAATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCAGTGCTAGCACTAAAAGCATCTTCCTGCTTTGTCTCTAAAATT  887

seq1  CTTCTCTAAAGTCCGAAAATACTGTTTTCTGGAATCTCCCAGGCTTAGGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTAAAGTCCGAAAATACTGTTTTCTGGAATCTCCCAGGCTTAGGG  937

seq1  GAGATGAGCTCAGCCATCCTAAGTGGATCAATGCCACTATCTTCTCAATC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGAGCTCAGCCATCCTAAGTGGATCAATGCCACTATCTTCTCAATC  987

seq1  CTGTTGCCTTTCTTTGCTATGGGTGTATTCCATAGGTCAGTCCTAATTCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGCCTTTCTTTGCTATGGGTGTATTCCATAGGTCAGTCCTAATTCT  1037

seq1  AGAATGTCTATCCAAGCAGTTCTTTTATAATAGTAGTTCTTGGCCTAACT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTCTATCCAAGCAGTTCTTTTATAATAGTAGTTCTTGGCCTAACT  1087

seq1  TACATCCTCAGCAACCCAGAATTC  1123
      ||||||||||||||||||||||||
seq2  TACATCCTCAGCAACCCAGAATTC  1111

seq1: chr15_57159646_57160772
seq2: B6Ng01-114C11.g_68_1174

seq1  GAATTCCCTCACATGAGACATTTAAAGTATTCAAATGGTTAAAAAAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTCACATGAGACATTTAAAGTATTCAAATGGTTAAAAAAAATA  50

seq1  AAGCATGCCAGTAGCCACTGGTTACTATAACTGAAAAACAAAAGAAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATGCCAGTAGCCACTGGTTACTATAACTGAAAAACAAAAGAAAAAT  100

seq1  TTTTTCAGTAAATATAGAAATTGAGTGTCATGTGAAATTTTTCTAGAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAGTAAATATAGAAATTGAGTGTCATGTGAAATTTTTCTAGAGCT  150

seq1  ATGTTGTTATAAATATAAAATGTTGTTATAAATATTAAAGCTACTAGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGTTATAAATATAAAATGTTGTTATAAATATTAAAGCTACTAGACT  200

seq1  GAAGATTTTTCTATGTTGCCAACTTTTATGTCATTCTTAATAAAAGCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATTTTTCTATGTTGCCAACTTTTATGTCATTCTTAATAAAAGCAAA  250

seq1  GGCAGTGTGGTAGAAATTACCTGAGTCATCTTCCAGTTTTGCACTGAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTGTGGTAGAAATTACCTGAGTCATCTTCCAGTTTTGCACTGAACA  300

seq1  TTATCATTATCATTTGAGATATTAATGCATGAGTACCATGCTTACATAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATTATCATTTGAGATATTAATGCATGAGTACCATGCTTACATAGT  350

seq1  TCCCATCCCTCCTTCTTTGAATGTCATCATGCAGGTTCTAGCAGTGGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATCCCTCCTTCTTTGAATGTCATCATGCAGGTTCTAGCAGTGGCAG  400

seq1  TTGGACCCCATGACTGTTGTTGCAGCTTTAGACAGTTGCTCTGGAGCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACCCCATGACTGTTGTTGCAGCTTTAGACAGTTGCTCTGGAGCAGA  450

seq1  GGGTCTAAATTTTAATGTGAAGCACAAGGGTTAGCCTGGGAATTTGTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTAAATTTTAATGTGAAGCACAAGGGTTAGCCTGGGAATTTGTATT  500

seq1  CCAGAGTAGAGTCTGAGGCAAGCAAGCCCTCCATGGCACAGCGCACTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTAGAGTCTGAGGCAAGCAAGCCCTCCATGGCACAGCGCACTGCC  550

seq1  CTTCAGTCAACTGTATGAGCATCAAAACTCTAAGATCAGGTCTAGATGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTCAACTGTATGAGCATCAAAACTCTAAGATCAGGTCTAGATGCT  600

seq1  TTACTACAAGCCAAGCAATGCCCTGTATGTTAGTGGTTAACAACACAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTACAAGCCAAGCAATGCCCTGTATGTTAGTGGTTAACAACACAGAG  650

seq1  CAAGGAAGGTCTGTGTTCCTATGAAGTTTATATAATATTACTGAGAGCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAAGGTCTGTGTTCCTATGAAGTTTATATAATATTACTGAGAGCCA  700

seq1  ATCAACAAATCAATAAATATAGCCAAAATGAAAAGTGCACTTAGACAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACAAATCAATAAATATAGCCAAAATGAAAAGTGCACTTAGACAAAA  750

seq1  TGAAATCTCCAGGAACACAGATTTGATTTGTCTCTCAATTGGATATATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCTCCAGGAACACAGATTTGATTTGTCTCTCAATTGGATATATTC  800

seq1  TTCTTCAATGCTGTTTGAATCCTACAGGGAAAAAAAGTAATTATGATTTT  850
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTCTTCAATGCTGTTTGAATCCTACAGGG-AAAAAAGTAATTATGATTTT  849

seq1  CCTGATGGAAATCCAAGATCCTTTGCATGCATTAAACCAAGTCTGTTGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATGGAAATCCAAGATCCTTTGCATGCATTAAACCAAGTCTGTTGAT  899

seq1  GAAGATAAAGAGATGCCAGTTAAGAATGTCAAGGTAGGTGTAAGGACAGA  950
      ||||||||||||||| || |||||||||||||||||||||||||||||||
seq2  GAAGATAAAGAGATG-CAATTAAGAATGTCAAGGTAGGTGTAAGGACAGA  948

seq1  TGATTATATAGTTGTTAGGGATTGTGCTTGTTTAATTAATTAGTGGTTGT  1000
      ||||||||||||||||||||| ||||||||||||||||| |||||| |||
seq2  TGATTATATAGTTGTTAGGGA-TGTGCTTGTTTAATTAA-TAGTGG-TGT  995

seq1  GCATCAGTAAAAATGACTCCAGTAACACTTAGTAGTCAGGTAGGGTCCCA  1050
      |||||||| ||||||| | ||||||||| ||||||||| ||||||| |||
seq2  GCATCAGT-AAAATGA-TTCAGTAACAC-TAGTAGTCA-GTAGGGT-CCA  1040

seq1  GTGTCAGGCATGATCTCTCTCTCTCATATGCTGTGCCTTAAGTTCAATTA  1100
      |||| ||   ||||| || || |||| | |||||||| |||| |||| ||
seq2  GTGTAAG--CTGATCCCT-TCCCTCA-AAGCTGTGCC-TAAG-TCAA-TA  1083

seq1  GTTGGCAACCACTATGGAATGGATGCC  1127
      ||||   |||||||||| |||||||||
seq2  GTTG--CACCACTATGG-ATGGATGCC  1107