BAC Information

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BAC

Clone NameB6Ng01-115G10
Chromosome15 (Build37)
Map Location 98,630,871 - 98,823,851
singlet/doubletdoublet
Overlap geneDdn, Prkag1, Mll2, Rhebl1, Dhh, Lmbr1l, Tuba1b, Tuba1a
Upstream geneHdac7a, Vdr, Tmem106c, Col2a1, Senp1, Pfkm, Asb8, AI836003, Olfr288, LOC634104, EG629524, H1fnt, Zfp641, Olfr285, Olfr284, Olfr283, 1700031M16Rik, LOC100042818, Olfr282, LOC629549, Olfr281, Olfr240-ps1, GA_x5J8B7W76D0-7895713-7896429, Lalba, Olfr234, Olfr278-ps1, 2310037I24Rik, LOC100043418, Ccnt1, 4930415O20Rik, Adcy6, Cacnb3, Ddx23, Rnd1, Ccdc65, Fkbp11, Arf3, 5830427D03Rik, Wnt10b, Wnt1
Downstream geneEG668092, Tuba1c, Prph1, Troap, C1ql4, 2810451A06Rik, Spats2, Kcnh3, Mcrs1, EG545136, Prpf40b, Fmnl3, Tegt, C230021P08Rik, 4930556P03Rik, Faim2, LOC545137, Aqp2, Aqp5, Aqp6, Racgap1, LOC100043473, Accn2, Smarcd1, Gpd1, 2310016M24Rik, Lass5, Lima1, LOC100043481, LOC100042918, 1700030F18Rik, Gm920, D330037H05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115G10.bB6Ng01-115G10.g
ACCDH920677DH920678
length5791,092
definitionDH920677|Mus musculus domesticus DNA, BAC clone: B6Ng01-115G10, 5' end.DH920678|Mus musculus domesticus DNA, BAC clone: B6Ng01-115G10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,630,871 - 98,631,455)(98,822,754 - 98,823,851)
sequence
ctgggttcaagggattccccacccacaacccgccatgtagccgggactac
aggtgtatgcgtctgccccatgtgaaggtcagatgcttgctttatgcttg
ccttcagtaacctcttcgtgaccaaggcctctttcttcccagggccttgt
tccctgtggaactcatgtcttctcacattctggacgcatctgtttcctca
tcatctttgtgagaactacctcaaacatcccttcttcagctttcccttgg
cagagtgaccttgcctgcccgaactcttgaaatgctttgctggccatccg
tgtatgcagtagaccaggcttgcacctgcatgaggacacaggttaggtgt
ctctcattttgccatccttgctagcaccagatagggacattatatgccct
catcaaatgatgaataagtggattcatggatgaagaagcagacgcatgga
tagatggatatggagaggcacttgaatggatgatagatgagatgtggata
gatcagtaagtgcataggtaggatgcatggatagatgcatgcataggaag
gatagataggtgagtgggtggatgggtgg
gaattctcggctaggatcaatactcgccgtgtaaacgtatgaaacgttaa
aaagaaatcaagagacgttacataaaagaagaggcaggatggtccagaaa
cttaagcaatcgcccagggtgacttccaaggcgtggcggcggtgagctca
cccgctgcgacggaaatggcctcggaggaagccgggcggtggccgcagcg
cggggacagcgccgcctgctggttacaggcgacaaagagctgggctcgca
gggcgtggaccctgcacattccagagagctcaccaggaccttaggagcca
gggacatagctggagccgcccctctgccaggaagagaaagttcgatgcct
gctatagttagggaaggcagtctccctgggggttttagcggctttaattc
ctaaagcgaaaaagggtggatttgatttgtataacgttgtcattttagac
cactccagtggaggatggcaagcagaacctgataggggtccactttaatt
ttattttatccctgtcttaatgggacttgtcaaatattaatggggcttta
aggcaggctttaaatatgagcagggaattgcgttttaaacgtggatgcgc
ttgccatttctgtctggcaatattattctaggaaggttgcagtgaggttt
ctggagtcccgcctcctctccccacttccgttttctcttccctcatttga
caagagcctctgcacccatctccttagaacacgtcaccatcatccactgg
aagtggattgtggtaccacgtttctgtttctcccctatagctgaagccgg
cagaaagatgacagattgctatctgctcctgagcctgcctggttgccggg
aaccaggcaggatgatgctaacgcagctcttactgtgttgctttcattaa
gtagcaggtgctgtctcatggacaaccaaccctgtgttcacatattccgg
tgattaggtcttccttagtatcttcccctcacgcgactgctgatttaaaa
ctctttcctactgcgtttgacttctgtagagatgaagatccaaagatggg
cgcttcatatgcacgcttgctactgaaattatgcagttggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_98630871_98631455
seq2: B6Ng01-115G10.b_44_628

seq1  GAATTCCTGGGTTCAAGGGATTCCCCACCCACAACCCGCCATGTAGCCGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGGTTCAAGGGATTCCCCACCCACAACCCGCCATGTAGCCGG  50

seq1  GACTACAGGTGTATGCGTCTGCCCCATGTGAAGGTCAGATGCTTGCTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACAGGTGTATGCGTCTGCCCCATGTGAAGGTCAGATGCTTGCTTTA  100

seq1  TGCTTGCCTTCAGTAACCTCTTCGTGACCAAGGCCTCTTTCTTCCCAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGCCTTCAGTAACCTCTTCGTGACCAAGGCCTCTTTCTTCCCAGGG  150

seq1  CCTTGTTCCCTGTGGAACTCATGTCTTCTCACATTCTGGACGCATCTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTCCCTGTGGAACTCATGTCTTCTCACATTCTGGACGCATCTGTT  200

seq1  TCCTCATCATCTTTGTGAGAACTACCTCAAACATCCCTTCTTCAGCTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATCATCTTTGTGAGAACTACCTCAAACATCCCTTCTTCAGCTTTC  250

seq1  CCTTGGCAGAGTGACCTTGCCTGCCCGAACTCTTGAAATGCTTTGCTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGCAGAGTGACCTTGCCTGCCCGAACTCTTGAAATGCTTTGCTGGC  300

seq1  CATCCGTGTATGCAGTAGACCAGGCTTGCACCTGCATGAGGACACAGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCGTGTATGCAGTAGACCAGGCTTGCACCTGCATGAGGACACAGGTT  350

seq1  AGGTGTCTCTCATTTTGCCATCCTTGCTAGCACCAGATAGGGACATTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTCTCTCATTTTGCCATCCTTGCTAGCACCAGATAGGGACATTATA  400

seq1  TGCCCTCATCAAATGATGAATAAGTGGATTCATGGATGAAGAAGCAGACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCATCAAATGATGAATAAGTGGATTCATGGATGAAGAAGCAGACG  450

seq1  CATGGATAGATGGATATGGAGAGGCACTTGAATGGATGATAGATGAGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGATAGATGGATATGGAGAGGCACTTGAATGGATGATAGATGAGATG  500

seq1  TGGATAGATCAGTAAGTGCATAGGTAGGATGCATGGATAGATGCATGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAGATCAGTAAGTGCATAGGTAGGATGCATGGATAGATGCATGCAT  550

seq1  AGGAAGGATAGATAGGTGAGTGGGTGGATGGGTGG  585
      |||||||||||||||||||||||||||||||||||
seq2  AGGAAGGATAGATAGGTGAGTGGGTGGATGGGTGG  585

seq1: chr15_98822754_98823851
seq2: B6Ng01-115G10.g_68_1159 (reverse)

seq1  GGCCAACTGCATAATTTCAGGTGCAAGCGTGC-TATGAAAGCGCCCATCT  49
      ||||||||||||||||||||  |||||||||| |||| ||||||||||||
seq2  GGCCAACTGCATAATTTCAGTAGCAAGCGTGCATATG-AAGCGCCCATCT  49

seq1  GTGGATCTTCATTCTCTTACAAGAAGTCAAACGCAGTTAGGAAAGAGTTT  99
       |||||||||| |||| ||| ||||||||||||||| |||||||||||||
seq2  TTGGATCTTCA-TCTC-TAC-AGAAGTCAAACGCAG-TAGGAAAGAGTTT  95

seq1  TAAAATCAGCAGTCGCTGTGAGTGGAAGATACTAAGGAAGACCTAATCAC  149
      | |||||||||||||| ||||| |||||||||||||||||||||||||||
seq2  T-AAATCAGCAGTCGC-GTGAGGGGAAGATACTAAGGAAGACCTAATCAC  143

seq1  CGAATAATGTGAACACAGGGTTGGTTGTCCATGAGACAGCACCTGCTACT  199
      || |  ||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAATATGTGAACACAGGGTTGGTTGTCCATGAGACAGCACCTGCTACT  193

seq1  TAATGAAAGCAACACAGTAAGAGCTGCGTTAGCATCATCCTGCCTGGTTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAAGCAACACAGTAAGAGCTGCGTTAGCATCATCCTGCCTGGTTC  243

seq1  CCGGCAACCAGGCAGGCTCAGGAGCAGATAGCAATCTGTCATCTTTCTGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCAACCAGGCAGGCTCAGGAGCAGATAGCAATCTGTCATCTTTCTGC  293

seq1  CGGCTTCAGCTATAGGGGAGAAACAGAAACGTGGTACCACAATCCACTTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTTCAGCTATAGGGGAGAAACAGAAACGTGGTACCACAATCCACTTC  343

seq1  CAGTGGATGATGGTGACGTGTTCTAAGGAGATGGGTGCAGAGGCTCTTGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGATGATGGTGACGTGTTCTAAGGAGATGGGTGCAGAGGCTCTTGT  393

seq1  CAAATGAGGGAAGAGAAAACGGAAGTGGGGAGAGGAGGCGGGACTCCAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGAGGGAAGAGAAAACGGAAGTGGGGAGAGGAGGCGGGACTCCAGA  443

seq1  AACCTCACTGCAACCTTCCTAGAATAATATTGCCAGACAGAAATGGCAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCACTGCAACCTTCCTAGAATAATATTGCCAGACAGAAATGGCAAG  493

seq1  CGCATCCACGTTTAAAACGCAATTCCCTGCTCATATTTAAAGCCTGCCTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCATCCACGTTTAAAACGCAATTCCCTGCTCATATTTAAAGCCTGCCTT  543

seq1  AAAGCCCCATTAATATTTGACAAGTCCCATTAAGACAGGGATAAAATAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCCCATTAATATTTGACAAGTCCCATTAAGACAGGGATAAAATAAA  593

seq1  ATTAAAGTGGACCCCTATCAGGTTCTGCTTGCCATCCTCCACTGGAGTGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGTGGACCCCTATCAGGTTCTGCTTGCCATCCTCCACTGGAGTGG  643

seq1  TCTAAAATGACAACGTTATACAAATCAAATCCACCCTTTTTCGCTTTAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAATGACAACGTTATACAAATCAAATCCACCCTTTTTCGCTTTAGG  693

seq1  AATTAAAGCCGCTAAAACCCCCAGGGAGACTGCCTTCCCTAACTATAGCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAGCCGCTAAAACCCCCAGGGAGACTGCCTTCCCTAACTATAGCA  743

seq1  GGCATCGAACTTTCTCTTCCTGGCAGAGGGGCGGCTCCAGCTATGTCCCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCGAACTTTCTCTTCCTGGCAGAGGGGCGGCTCCAGCTATGTCCCT  793

seq1  GGCTCCTAAGGTCCTGGTGAGCTCTCTGGAATGTGCAGGGTCCACGCCCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCTAAGGTCCTGGTGAGCTCTCTGGAATGTGCAGGGTCCACGCCCT  843

seq1  GCGAGCCCAGCTCTTTGTCGCCTGTAACCAGCAGGCGGCGCTGTCCCCGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGCCCAGCTCTTTGTCGCCTGTAACCAGCAGGCGGCGCTGTCCCCGC  893

seq1  GCTGCGGCCACCGCCCGGCTTCCTCCGAGGCCATTTCCGTCGCAGCGGGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCGGCCACCGCCCGGCTTCCTCCGAGGCCATTTCCGTCGCAGCGGGT  943

seq1  GAGCTCACCGCCGCCACGCCTTGGAAGTCACCCTGGGCGATTGCTTAAGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCACCGCCGCCACGCCTTGGAAGTCACCCTGGGCGATTGCTTAAGT  993

seq1  TTCTGGACCATCCTGCCTCTTCTTTTATGTAACGTCTCTTGATTTCTTTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGACCATCCTGCCTCTTCTTTTATGTAACGTCTCTTGATTTCTTTT  1043

seq1  TAACGTTTCATACGTTTACACGGCGAGTATTGATCCTAGCCGAGAATTC  1098
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGTTTCATACGTTTACACGGCGAGTATTGATCCTAGCCGAGAATTC  1092