BAC Information

Click to search

BAC

Clone NameB6Ng01-115K17
Chromosome15 (Build37)
Map Location 96,605,191 - 96,605,905
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667864, Tmem16f, LOC100043329, D030018L15Rik, LOC100043335, EG667869, LOC667874, LOC667894, Arid2, Sfrs2ip, Slc38a1, Slc38a2, LOC667941
Downstream geneLOC546651, Slc38a4, Amigo2, BC038822, LOC100043354, LOC100042774, D15Ertd682e, Pp11r, Rapgef3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115K17.bB6Ng01-115K17.g
ACCDH920874DH920875
length7161,042
definitionDH920874|Mus musculus domesticus DNA, BAC clone: B6Ng01-115K17, 5' end.DH920875|Mus musculus domesticus DNA, BAC clone: B6Ng01-115K17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattttatcttaatgtgctttgcccttttaccactcttcccttt
tctcacgggggggggggggatatatcctgtgctaggcatgctaaattatg
tctatgtgctacttcatttcatcttcataatcatgatccttggtgtctgg
ctgagtagatcaaggcacagagaaacaaggcaacttccccaaactcacac
agctaaggttagcgttaaaatccacaagaaactcctctttaagtatgcca
tgcggtgtcgttacagaaatgattgtacgatagactgtatcacacacaca
cacacacacacacacacacacacccctcaactactcaaatataaacactt
tgcacgactgcctcattttaatcctctcagaacatttttggggtttgcat
cgttgtgtttgggattctattaacctctctaattcttagaacactaccta
aagtgaggtttttctgactcagttttccccttcctacaatgacactgtga
atagtctttgcaagtatcactgtaatttatggatgttaagaatgcacatt
ataacacagcttgaggcgggctctgtcattgcaaacaattatcacttttg
acctgtcacctgaccttctggccttccttcctcatcaagatccccaccct
aagctgccgatgctccctctccggctactacacaaggagcgatcatttct
ctctaaaatttgggct
gaattctctatttagatctgtacttccatttttttaaatggattatttgg
tttgttggtgtctaggttcttgagttcttcataaatgttgggtatcaggc
ctctgtcagatgtggcgttggtaaagagctttttccattccatgggctgc
tgttttgtccctggtgatggtgtcctttgctttacagaagcttttcagtt
tcacgaggtcacatttattacttgttgatcttagtgactgctcgattggt
gttctgtccagagaactgccttccaagccaatgcatgctaaactattcac
cacgttctttcctatcaggatcagactatctggctttatgttaaggtctt
tgatccacttggacttaagttttttgttttgttttgttttgttttacacg
gtgatagatatggatctattggcctctcctacatgcagacatccagttag
accagcactatttttgaagcttccttccttgttccactgtatatttctgg
cttctttatcaacaatctgtaggagagtgagtttatttctgggtcttcaa
ttccattgatcaacttttctgattttatgtagtaccacgtggattttatt
attatcgctctgtagtacatgaagcctgaaatcaggaatggtgatacctc
tagaagttctttattgtacaggattgttttagcgaacctggctcttcgct
tttccagatgaagatgagtgctgttctttcaaagtctgtagagaattatg
ctggaattttgatggggattgctttggtgaagatggccatttttactatg
ttaatcctactaatccatgagtatgggagatctttcttcagagacttgaa
gttcttgtgatactgactttcacttgcttggttagagttacaccaaggta
ttttattcatggttgttgtgtagggtgttgtttcctgatttctttgatat
aggagggctgcagttgttttaatttttgtttaactaatcttgatccacgc
ttcactgaaagaagttatcagctgtagagtttcctgttgaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_96605191_96605905
seq2: B6Ng01-115K17.b_45_760 (reverse)

seq1  AGCCCAAATATTAGAGAGAAATGATCGCTCCTTGTGTAGTAGCCGGAGAG  50
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAAATTTTAGAGAGAAATGATCGCTCCTTGTGTAGTAGCCGGAGAG  50

seq1  GGAGCATCGGCAGCTTAGGGTGGGGATCTTGATGAGGAAGGAAGGCCAG-  99
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGAGCATCGGCAGCTTAGGGTGGGGATCTTGATGAGGAAGGAAGGCCAGA  100

seq1  AGGTCAGGTGACAGGTCAAAAGTGATAATTGTTTGCAATGACAGAGCCCG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGGTGACAGGTCAAAAGTGATAATTGTTTGCAATGACAGAGCCCG  150

seq1  CCTCAAGCTGTGTTCTAATGTGCATTCTTAACATCCATAAATTACAGTGA  199
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CCTCAAGCTGTGTTATAATGTGCATTCTTAACATCCATAAATTACAGTGA  200

seq1  TACTTGCAAAGACTATTCACAGTGTCATTGTAGGAAGGGGAAAACTGAGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGCAAAGACTATTCACAGTGTCATTGTAGGAAGGGGAAAACTGAGT  250

seq1  CAGAAAAACCTCACTTTAGGTAGTGTTCTAAGAATTAGAGAGGTTAATAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAACCTCACTTTAGGTAGTGTTCTAAGAATTAGAGAGGTTAATAG  300

seq1  AATCCCAAACACAACGATGCAAACCCCAAAAATGTTCTGAGAGGATTAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCAAACACAACGATGCAAACCCCAAAAATGTTCTGAGAGGATTAAA  350

seq1  ATGAGGCAGTCGTGCAAAGTGTTTATATTTGAGTAGTTGAGGGGTGTGTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGCAGTCGTGCAAAGTGTTTATATTTGAGTAGTTGAGGGGTGTGTG  400

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGATACAGTCTATCGTACAATCATTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGATACAGTCTATCGTACAATCATTT  450

seq1  CTGTAACGACACCGCATGGCATACTTAAAGAGGAGTTTCTTGTGGATTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAACGACACCGCATGGCATACTTAAAGAGGAGTTTCTTGTGGATTTT  500

seq1  AACGCTAACCTTAGCTGTGTGAGTTTGGGGAAGTTGCCTTGTTTCTCTGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCTAACCTTAGCTGTGTGAGTTTGGGGAAGTTGCCTTGTTTCTCTGT  550

seq1  GCCTTGATCTACTCAGCCAGACACCAAGGATCATGATTATGAAGATGAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGATCTACTCAGCCAGACACCAAGGATCATGATTATGAAGATGAAA  600

seq1  TGAAGTAGCACATAGACATAATTTAGCATGCCTAGCACAGGATATATCCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTAGCACATAGACATAATTTAGCATGCCTAGCACAGGATATATCCC  650

seq1  CCCCCCCCCCGTGAGAAAAGGGAAGAGTGGTAAAAGGGCAAAGCACATTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCGTGAGAAAAGGGAAGAGTGGTAAAAGGGCAAAGCACATTA  700

seq1  AGATAAAATGGAATTC  715
      ||||||||||||||||
seq2  AGATAAAATGGAATTC  716