BAC Information

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BAC

Clone NameB6Ng01-115L19
Chromosome15 (Build37)
Map Location 99,144,307 - 99,341,727
singlet/doubletdoublet
Overlap genePrpf40b, Fmnl3, Tegt, C230021P08Rik, 4930556P03Rik, Faim2
Upstream geneOlfr284, Olfr283, 1700031M16Rik, LOC100042818, Olfr282, LOC629549, Olfr281, Olfr240-ps1, GA_x5J8B7W76D0-7895713-7896429, Lalba, Olfr234, Olfr278-ps1, 2310037I24Rik, LOC100043418, Ccnt1, 4930415O20Rik, Adcy6, Cacnb3, Ddx23, Rnd1, Ccdc65, Fkbp11, Arf3, 5830427D03Rik, Wnt10b, Wnt1, Ddn, Prkag1, Mll2, Rhebl1, Dhh, Lmbr1l, Tuba1b, Tuba1a, EG668092, Tuba1c, Prph1, Troap, C1ql4, 2810451A06Rik, Spats2, Kcnh3, Mcrs1, EG545136
Downstream geneLOC545137, Aqp2, Aqp5, Aqp6, Racgap1, LOC100043473, Accn2, Smarcd1, Gpd1, 2310016M24Rik, Lass5, Lima1, LOC100043481, LOC100042918, 1700030F18Rik, Gm920, D330037H05Rik, 4930478M13Rik, Dip2b, Atf1, 4930478A21Rik, EG432981, Mettl7a, ENSMUSG00000058057, LOC554292, Ubie, Yghl1-4, Slc11a2, EG432982, Letmd1, BC035295, Tcfcp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115L19.bB6Ng01-115L19.g
ACCDH920922DH920923
length7151,109
definitionDH920922|Mus musculus domesticus DNA, BAC clone: B6Ng01-115L19, 5' end.DH920923|Mus musculus domesticus DNA, BAC clone: B6Ng01-115L19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,341,013 - 99,341,727)(99,144,307 - 99,145,420)
sequence
gaattcaggacctctgctcactccagccctgctctctccgggccaaagat
ttatttattattatattatacaaatgttttattatattataaatattata
ttacacaaataatatatttattttatgtaagtacactgtagctgtcttca
gacacaccagaagaggggtgtgtctgaagacagctcattacagatggttg
tgagctgggatttgaactcaggaccttcggaagagcagtcagtgctctca
accactgagccgtccgtctctccagcccctccacctgagctcttgcttcc
aaggcagagacagagagctctctgtgaggaacagacagaccccagataga
gcagggatgatttggcaacctgaggaggagcctagagccagacccaggct
gagggaatgactggcaaacaggatgagtcgcacttggccagcctgagcct
ggggctgtgctccaaggaaagacatgtcaggtctgtgggaagcccctgtg
ggaaccactgggagctccccaagaatcacagcctctctcagacccggcct
tcttagagaggagctacccctgttcttccattctcaggactgagccctgc
cccaacttctggcacctccgccagccagctgtgtgctaagccaatctttc
ctctcccacaggtcccctggctccacgcggtctatgctgtactgggagcg
ggtgtgttcacgttg
gaattccatttacctatcagcttggccaagtgagattcctctcctgcacc
ttaacttcactagcacatggaggctttttggtgagaaatacagaacctgg
ctgtgtacttaagacaatgaacatgatttaaatattgatggagagctata
cacttgatggccaacatctcttcctggacctatgcattcagggtaggtgt
agtggctgaaagcagatttgggatttagacctgggatatgttagaataag
tgatttcatttttctggtctgcataaaattagaagactgacctagtatga
gaggattagtggagaaacgtgtcaagcactcagcagagaacctactaccc
agtaagcacccagaacatgaggcaaagggtatagaccagatgttaagcat
gcatggcagcttccatgagcagcaggaaggcccagctgtggccagaggaa
caaagacctaattgtaataactcagtcatctatcaagacggaagacactt
gctgactcttttggctccatatgaatccacacaggtcggatggggccagt
aagatgaagacttagcatggtttctaaggtgtgtcacaagtcttatggat
cctatttgagggcagaggccaggcttgaacaccttgcagcctgatccctt
ttgcccactggcctgtggtgcccctggccttcacacactgctgtgcccac
aggatcggggcttctgtgtggaggtgaacacagcatttgaggacttcgcc
cacgtcataagctttgacaagagggctgctgcgctggacgcaggcaacat
caagctgaccttcaatagtgtgaggggacgggcaagcctgggtggtccct
ctcacttaccccatgtcttgtccttcctaactgccctgctgattatcttg
ggtttgggacacatcttcctacctcttaaaggtaccctgaccctattctg
tttcccttttgccttcagctgctggaaaagcagagcacgggagagggatc
gggaaatgaagaggcccgaagatgcggcccaaagtctggctttattcagt
agtcatgctgagcagccgtgcctgcctctgagcttgacaatgctggagag
gtcagaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_99341013_99341727
seq2: B6Ng01-115L19.b_45_759 (reverse)

seq1  CAACGTGAACACACCCGCTCCCAGTACAGCATAGACCGCGTGGAGCCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGTGAACACACCCGCTCCCAGTACAGCATAGACCGCGTGGAGCCAGG  50

seq1  GGACCTGTGGGAGAGGAAAGATTGGCTTAGCACACAGCTGGCTGGCGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTGTGGGAGAGGAAAGATTGGCTTAGCACACAGCTGGCTGGCGGAG  100

seq1  GTGCCAGAAGTTGGGGCAGGGCTCAGTCCTGAGAATGGAAGAACAGGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAGAAGTTGGGGCAGGGCTCAGTCCTGAGAATGGAAGAACAGGGGT  150

seq1  AGCTCCTCTCTAAGAAGGCCGGGTCTGAGAGAGGCTGTGATTCTTGGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTCTCTAAGAAGGCCGGGTCTGAGAGAGGCTGTGATTCTTGGGGA  200

seq1  GCTCCCAGTGGTTCCCACAGGGGCTTCCCACAGACCTGACATGTCTTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCAGTGGTTCCCACAGGGGCTTCCCACAGACCTGACATGTCTTTCC  250

seq1  TTGGAGCACAGCCCCAGGCTCAGGCTGGCCAAGTGCGACTCATCCTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGCACAGCCCCAGGCTCAGGCTGGCCAAGTGCGACTCATCCTGTTT  300

seq1  GCCAGTCATTCCCTCAGCCTGGGTCTGGCTCTAGGCTCCTCCTCAGGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTCATTCCCTCAGCCTGGGTCTGGCTCTAGGCTCCTCCTCAGGTTG  350

seq1  CCAAATCATCCCTGCTCTATCTGGGGTCTGTCTGTTCCTCACAGAGAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATCATCCCTGCTCTATCTGGGGTCTGTCTGTTCCTCACAGAGAGCT  400

seq1  CTCTGTCTCTGCCTTGGAAGCAAGAGCTCAGGTGGAGGGGCTGGAGAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTCTGCCTTGGAAGCAAGAGCTCAGGTGGAGGGGCTGGAGAGAC  450

seq1  GGACGGCTCAGTGGTTGAGAGCACTGACTGCTCTTCCGAAGGTCCTGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGGCTCAGTGGTTGAGAGCACTGACTGCTCTTCCGAAGGTCCTGAGT  500

seq1  TCAAATCCCAGCTCACAACCATCTGTAATGAGCTGTCTTCAGACACACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCCCAGCTCACAACCATCTGTAATGAGCTGTCTTCAGACACACCC  550

seq1  CTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTTACATAAAATAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTTACATAAAATAAAT  600

seq1  ATATTATTTGTGTAATATAATATTTATAATATAATAAAACATTTGTATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATTTGTGTAATATAATATTTATAATATAATAAAACATTTGTATAA  650

seq1  TATAATAATAAATAAATCTTTGGCCCGGAGAGAGCAGGGCTGGAGTGAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAATAAATAAATCTTTGGCCCGGAGAGAGCAGGGCTGGAGTGAGC  700

seq1  AGAGGTCCTGAATTC  715
      |||||||||||||||
seq2  AGAGGTCCTGAATTC  715

seq1: chr15_99144307_99145420
seq2: B6Ng01-115L19.g_70_1178

seq1  GAATTCCATTTACCTATCAGCTTGGCCAAGTGAGATTCCTCTCCTGCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTTACCTATCAGCTTGGCCAAGTGAGATTCCTCTCCTGCACC  50

seq1  TTAACTTCACTAGCACATGGAGGCTTTTTGGTGAGAAATACAGAACCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTCACTAGCACATGGAGGCTTTTTGGTGAGAAATACAGAACCTGG  100

seq1  CTGTGTACTTAAGACAATGAACATGATTTAAATATTGATGGAGAGCTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTACTTAAGACAATGAACATGATTTAAATATTGATGGAGAGCTATA  150

seq1  CACTTGATGGCCAACATCTCTTCCTGGACCTATGCATTCAGGGTAGGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGATGGCCAACATCTCTTCCTGGACCTATGCATTCAGGGTAGGTGT  200

seq1  AGTGGCTGAAAGCAGATTTGGGATTTAGACCTGGGATATGTTAGAATAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTGAAAGCAGATTTGGGATTTAGACCTGGGATATGTTAGAATAAG  250

seq1  TGATTTCATTTTTCTGGTCTGCATAAAATTAGAAGACTGACCTAGTATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCATTTTTCTGGTCTGCATAAAATTAGAAGACTGACCTAGTATGA  300

seq1  GAGGATTAGTGGAGAAACGTGTCAAGCACTCAGCAGAGAACCTACTACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTAGTGGAGAAACGTGTCAAGCACTCAGCAGAGAACCTACTACCC  350

seq1  AGTAAGCACCCAGAACATGAGGCAAAGGGTATAGACCAGATGTTAAGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGCACCCAGAACATGAGGCAAAGGGTATAGACCAGATGTTAAGCAT  400

seq1  GCATGGCAGCTTCCATGAGCAGCAGGAAGGCCCAGCTGTGGCCAGAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGCAGCTTCCATGAGCAGCAGGAAGGCCCAGCTGTGGCCAGAGGAA  450

seq1  CAAAGACCTAATTGTAATAACTCAGTCATCTATCAAGACGGAAGACACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACCTAATTGTAATAACTCAGTCATCTATCAAGACGGAAGACACTT  500

seq1  GCTGACTCTTTTGGCTCCATATGAATCCACACAGGTCGGATGGGGCCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTCTTTTGGCTCCATATGAATCCACACAGGTCGGATGGGGCCAGT  550

seq1  AAGATGAAGACTTAGCATGGTTTCTAAGGTGTGTCACAAGTCTTATGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGAAGACTTAGCATGGTTTCTAAGGTGTGTCACAAGTCTTATGGAT  600

seq1  CCTATTTGAGGGCAGAGGCCAGGCTTGAACACCTTGCAGCCTGATCCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTGAGGGCAGAGGCCAGGCTTGAACACCTTGCAGCCTGATCCCTT  650

seq1  TTGCCCACTGGCCTGTGGTGCCCCTGGCCTTCACACACTGCTGTGCCCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCACTGGCCTGTGGTGCCCCTGGCCTTCACACACTGCTGTGCCCAC  700

seq1  AGGATCGGGGCTTCTGTGTGGAGGTGAACACAGCATTTGAGGACTTCGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCGGGGCTTCTGTGTGGAGGTGAACACAGCATTTGAGGACTTCGCC  750

seq1  CACGTCATAAGCTTTGACAAGAGGGCTGCTGCGCTGGACGCAGGCAACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTCATAAGCTTTGACAAGAGGGCTGCTGCGCTGGACGCAGGCAACAT  800

seq1  CAAGCTGACCTTCAATAGTGTGAGGGGACGGGCAAGCCTGGGTGGT-CCT  849
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CAAGCTGACCTTCAATAGTGTGAGGGGACGGGCAAGCCTGGGTGGTCCCT  850

seq1  CTCACTTACCCCAATGTCTTGTTCCTCCTAACTGCCCTGCTGATTATCTT  899
      |||||||||||| ||||||||| | |||||||||||||||||||||||||
seq2  CTCACTTACCCC-ATGTCTTGTCCTTCCTAACTGCCCTGCTGATTATCTT  899

seq1  GGGTTTGGGACACATCTTCCTACCTCTT-AAGGTACCCCTGACCCTATTC  948
      |||||||||||||||||||||||||||| |||||| ||||||||||||||
seq2  GGGTTTGGGACACATCTTCCTACCTCTTAAAGGTA-CCCTGACCCTATTC  948

seq1  TGTTTCCC-TTTGCCTTCAGCTGCTGGAAAAAGCAGAGGCACGGGAGAGG  997
      |||||||| |||||||||||||||||| ||||||||| ||||||||||||
seq2  TGTTTCCCTTTTGCCTTCAGCTGCTGG-AAAAGCAGA-GCACGGGAGAGG  996

seq1  GAACGGGAAAAGGAGGAGGCCCGAAGGATGCGGCGCAGAGAAGCTGCCTT  1047
      || |||| ||| || |||||||||| |||||||| || ||   ||| |||
seq2  GATCGGG-AAATGAAGAGGCCCGAA-GATGCGGCCCAAAG--TCTGGCTT  1042

seq1  T----CGAAG-CATGCTGAGGCAGGCCGTGCCTG-CTCTGGAGCTGGGCA  1091
      |     | || |||||||| ||| |||||||||| |||| ||||| | ||
seq2  TATTCAGTAGTCATGCTGA-GCA-GCCGTGCCTGCCTCT-GAGCTTGACA  1089

seq1  CTGCCTGGGAAGAGGTCAGAAGC  1114
       || ||||  |||||||||||||
seq2  ATG-CTGG--AGAGGTCAGAAGC  1109