BAC Information

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BAC

Clone NameB6Ng01-120F07
Chromosome15 (Build37)
Map Location 58,349,418 - 58,489,746
singlet/doubletdoublet
Overlap geneEG631797
Upstream geneZhx2, Derl1, Wdr67, BC030396, 9130401M01Rik, Zhx1, Atad2, LOC665244, 2410187C16Rik, Fbxo32, 8230402K04Rik, Anxa13, LOC100040231, D15Ertd621e
Downstream geneTmem65, EG546638, Trmt12, Rnf139, Tatdn1, Ndufb9, Mtss1, LOC100040330, EG268809, LOC665565, Sqle, E430025E21Rik, Nsmce2, Trib1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120F07.bB6Ng01-120F07.g
ACCDH924301DH924302
length174743
definitionDH924301|Mus musculus domesticus DNA, BAC clone: B6Ng01-120F07, 5' end.DH924302|Mus musculus domesticus DNA, BAC clone: B6Ng01-120F07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,349,418 - 58,349,591)(58,489,010 - 58,489,746)
sequence
gaattctccagggtcttagcttgaacaatactaaagcccactgaagcaaa
gaaaacagtctctctagacacccaggattcaactcttctagtccctcgtg
gatctcctatttattgtgtgtgcatggtgtaccacatgaaagaggtgggg
aaggagggagagagggagagagaa
gaattcaaatctcaaggctgtcattcattctctggttcaaaagcctggtt
caacccaaagcctcattaaatgtcctacgattcagatattttatttacat
atatttgcttatctacttattgagagacagaaagtatgtgtggcatgtgc
acatgcatgtgtgtgtgtgtgtgtgtgtgtgtatgtacgtgtgtgtatgt
acatgtgtgtcaggcagaggacaacttgcaggtgtcagttctcttctcta
acccatagggaaactgtacccacttcctcaggcttggcagcaagcacgtt
tacccaccaagtcacctttaataacaatgaataactgtgatctttctgaa
aggttttaaagggatttacaatcgttgctataactctggcattaatattt
gcatttgaccccaatttatggcctgcatagcttgaggattgcatagaata
gcaaagctcagtatggacaatagttgaatgactgtaatctactgatctgc
gttgaaacagtgagactttgagtgagtggcctgtccggtttaagactcac
ttttcctaaagatgctcataatataaaacaccccaatcccagcataaaga
catgcatagataagtctcacgggtccagagtataacaggaagattttaca
aagaaaggctgagcacataaattctgacctttggcatagaagtcgttagt
tattattatgaagagccttgcttactcctggcctcaggaaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_58349418_58349591
seq2: B6Ng01-120F07.b_47_220

seq1  GAATTCTCCAGGGTCTTAGCTTGAACAATACTAAAGCCCACTGAAGCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAGGGTCTTAGCTTGAACAATACTAAAGCCCACTGAAGCAAA  50

seq1  GAAAACAGTCTCTCTAGACACCCAGGATTCAACTCTTCTAGTCCCTCGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAGTCTCTCTAGACACCCAGGATTCAACTCTTCTAGTCCCTCGTG  100

seq1  GATCTCCTATTTATTGTGTGTGCATGGTGTACCACATGAAAGAGGTGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCCTATTTATTGTGTGTGCATGGTGTACCACATGAAAGAGGTGGGG  150

seq1  AAGGAGGGAGAGAGGGAGAGAGAA  174
      ||||||||||||||||||||||||
seq2  AAGGAGGGAGAGAGGGAGAGAGAA  174

seq1: chr15_58489010_58489746
seq2: B6Ng01-120F07.g_68_810 (reverse)

seq1  GCCTTCCTGAGGCCA-GAGTAAGCAAGGCTCTTCATAATAATAACTAACG  49
      || |||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GCTTTCCTGAGGCCAGGAGTAAGCAAGGCTCTTCATAATAATAACTAACG  50

seq1  ACTTCTATGCC-AAGGTCAGAATTTATGTGCTCAGCC-TTCTTTGTATAA  97
      ||||||||||| ||||||||||||||||||||||||| ||||||||| ||
seq2  ACTTCTATGCCAAAGGTCAGAATTTATGTGCTCAGCCTTTCTTTGTAAAA  100

seq1  TCTTCCTGTTATACTCTGGACCCGTGAGACTTATCTATGCATGTC-TTAT  146
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TCTTCCTGTTATACTCTGGACCCGTGAGACTTATCTATGCATGTCTTTAT  150

seq1  GCTGGGATTGGGGTG-TTTATATTATGAGCATCTTTAGG-AAAGTGAGTC  194
      ||||||||||||||| ||||||||||||||||||||||| ||||||||||
seq2  GCTGGGATTGGGGTGTTTTATATTATGAGCATCTTTAGGAAAAGTGAGTC  200

seq1  TTAAACCGGACAGGCCACTCACTCAAAGTCTCACTGTTTCAACGCAGATC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACCGGACAGGCCACTCACTCAAAGTCTCACTGTTTCAACGCAGATC  250

seq1  AGTAGATTACAGTCATTCAACTATTGTCCATACTGAGCTTTGCTATTCTA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGATTACAGTCATTCAACTATTGTCCATACTGAGCTTTGCTATTCTA  300

seq1  TGCAATCCTCAAGCTATGCAGGCCATAAATTGGGGTCAAATGCAAATATT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATCCTCAAGCTATGCAGGCCATAAATTGGGGTCAAATGCAAATATT  350

seq1  AATGCCAGAGTTATAGCAACGATTGTAAATCCCTTTAAAACCTTTCAGAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCAGAGTTATAGCAACGATTGTAAATCCCTTTAAAACCTTTCAGAA  400

seq1  AGATCACAGTTATTCATTGTTATTAAAGGTGACTTGGTGGGTAAACGTGC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCACAGTTATTCATTGTTATTAAAGGTGACTTGGTGGGTAAACGTGC  450

seq1  TTGCTGCCAAGCCTGAGGAAGTGGGTACAGTTTCCCTATGGGTTAGAGAA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCCAAGCCTGAGGAAGTGGGTACAGTTTCCCTATGGGTTAGAGAA  500

seq1  GAGAACTGACACCTGCAAGTTGTCCTCTGCCTGACACACATGTACATACA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTGACACCTGCAAGTTGTCCTCTGCCTGACACACATGTACATACA  550

seq1  CACACGTACATACACACACACACACACACACACACATGCATGTGCACATG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACGTACATACACACACACACACACACACACACATGCATGTGCACATG  600

seq1  CCACACATACTTTCTGTCTCTCAATAAGTAGATAAGCAAATATATGTAAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACATACTTTCTGTCTCTCAATAAGTAGATAAGCAAATATATGTAAA  650

seq1  TAAAATATCTGAATCGTAGGACATTTAATGAGGCTTTGGGTTGAACCAGG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATCTGAATCGTAGGACATTTAATGAGGCTTTGGGTTGAACCAGG  700

seq1  CTTTTGAACCAGAGAATGAATGACAGCCTTGAGATTTGAATTC  737
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGAACCAGAGAATGAATGACAGCCTTGAGATTTGAATTC  743