BAC Information

Click to search

BAC

Clone NameB6Ng01-120K02
Chromosome15 (Build37)
Map Location 15,315,493 - 15,440,281
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC674819, LOC100040024, LOC100040033, LOC100040046
Downstream geneEG239341, LOC100040087, LOC624183
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120K02.bB6Ng01-120K02.g
ACCDH924527DH924528
length9821,092
definitionDH924527|Mus musculus domesticus DNA, BAC clone: B6Ng01-120K02, 5' end.DH924528|Mus musculus domesticus DNA, BAC clone: B6Ng01-120K02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,315,493 - 15,316,026)(15,439,182 - 15,440,281)
sequence
gaattcatatacacaatctttcaaatcatgaagtgtttctctgaggattc
aattagttacttaaaatgggagcccaacagtagggagagggtagtataca
gtattatagagccagctccagcaggaagatagggtgtcaagtgagggagg
gggttgccattccacagtcaaatattctgacccatagtcgggtgtggtgg
tgcatgcctttaatcccagcactcaggagccagagtcaggcagatttctg
agttcaaggccagcctggtttacaaagtgaattccaggacaaccagggct
atacagagaaacactgtcttggaaaaaaaaatctgacccataattgttcc
tgtctaaaagaactgcagagatggaaatggagaggagcatcgggagaaga
agatccagtgacagacccaaagggtgatccagctcaaggggaggccccaa
gacctggcactattgcagaggctatggagcggtcacaaaaatggatctat
catgactgccttctgaaagacagctgaacgtcagatgcagatatttgtga
ccaaacgacagacagaagctgctgacccctgttgttgaattaggtaaagg
ctggaagaagctgaggaggagggtgaccctgtaggaggaccagcagtctc
aattaacctggaccccagagatctctcgaacactggaccaccaaccaggc
agcatacaccaggtgatatgaggcccccaacacatatatatcagaggact
gctgaggtctgggttcagtcagagaagatgcaccaaaccctcaagagatt
ggaggccccagatggtttagaggtgtggttgcatggcttcaactccctct
ttctctttagagaagtggagcctcccatagatatcaactagacttggtat
atcaagttgcagtaaaactagaaacattatctcctattgaggttagacag
gcattgctagttagggaaatggaatccaaaag
gaattccactgtgctaattgtcctgcatttagtcattccctgcagatgac
ttgaaaggcctgtggtggatttaagttagtcatcccaaagagtcttgtta
gtgctgcaaaggttacagattataccttggaaaaaaatgtgccagcctac
agaattcaaagccaatgcctaatttcatgaaccattggcttcaccttcac
ttagtttctctttgagccctttccttgaaagagaagtcctatctattgct
ttattttgtcttaattattacattatcaatgaggatatattgtgaacaga
agacaattagactgtttgatgatttgactggagatcacttgattgcacga
tgctttccagctcaatactctttactgtacattgtcagcaagaacacctc
atctacctctagagccggaaggtagatgaactgatttacaaattaagatc
cagaaacctcggcggtctttgggggactctgcaattaaaatactactcag
cgttttttagttcattaagaagtaatggtttcttgtgtgctttatatttt
caggtaattggccaaggggtctcaatgttaatcaaaaaaagtgtatgtaa
tgaattttagattatataaacaatttttatattagcagataaagtgagtg
aaggaagagtttgattacatggactgtgtttgcaatagttttccattata
aaatttctctgctttcaataacaatattctcacacaatacctcttataac
atcccatgtaaaaatgaacttattccaaatatatttccccctttctctgc
attgcatctctttctaatttaccataatttctaattttaaaatctataaa
gtctccttccactgaaatataacttttgaaaaaggaggctattccttgtt
tttctctgttccaatagtttttttttaaatattactttttctaccttatt
tactcaaatgtgtggtttatagagaataaataattcaataacttttggaa
tgcacattacaagtatatggcatgttaatatgctttttaaagtgttgcat
ttcatttacatttacatgtactcagtaatattttagtactta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_15315493_15316026
seq2: B6Ng01-120K02.b_45_578

seq1  GAATTCATATACACAATCTTTCAAATCATGAAGTGTTTCTCTGAGGATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATACACAATCTTTCAAATCATGAAGTGTTTCTCTGAGGATTC  50

seq1  AATTAGTTACTTAAAATGGGAGCCCAACAGTAGGGAGAGGGTAGTATACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTTACTTAAAATGGGAGCCCAACAGTAGGGAGAGGGTAGTATACA  100

seq1  GTATTATAGAGCCAGCTCCAGCAGGAAGATAGGGTGTCAAGTGAGGGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTATAGAGCCAGCTCCAGCAGGAAGATAGGGTGTCAAGTGAGGGAGG  150

seq1  GGGTTGCCATTCCACAGTCAAATATTCTGACCCATAGTCGGGTGTGGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGCCATTCCACAGTCAAATATTCTGACCCATAGTCGGGTGTGGTGG  200

seq1  TGCATGCCTTTAATCCCAGCACTCAGGAGCCAGAGTCAGGCAGATTTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGCCTTTAATCCCAGCACTCAGGAGCCAGAGTCAGGCAGATTTCTG  250

seq1  AGTTCAAGGCCAGCCTGGTTTACAAAGTGAATTCCAGGACAACCAGGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAAGGCCAGCCTGGTTTACAAAGTGAATTCCAGGACAACCAGGGCT  300

seq1  ATACAGAGAAACACTGTCTTGGAAAAAAAAATCTGACCCATAATTGTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAGAAACACTGTCTTGGAAAAAAAAATCTGACCCATAATTGTTCC  350

seq1  TGTCTAAAAGAACTGCAGAGATGGAAATGGAGAGGAGCATCGGGAGAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAAAAGAACTGCAGAGATGGAAATGGAGAGGAGCATCGGGAGAAGA  400

seq1  AGATCCAGTGACAGACCCAAAGGGTGATCCAGCTCAAGGGGAGGCCCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCAGTGACAGACCCAAAGGGTGATCCAGCTCAAGGGGAGGCCCCAA  450

seq1  GACCTGGCACTATTGCAGAGGCTATGGAGCGGTCACAAAAATGGATCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGGCACTATTGCAGAGGCTATGGAGCGGTCACAAAAATGGATCTAT  500

seq1  CATGACTGCCTTCTGAAAGACAGCTGAACGTCAG  534
      ||||||||||||||||||||||||||||||||||
seq2  CATGACTGCCTTCTGAAAGACAGCTGAACGTCAG  534

seq1: chr15_15439182_15440281
seq2: B6Ng01-120K02.g_64_1155 (reverse)

seq1  TAAGTAACTAAATATTTAACTTGAGTTACATGTAAATGGTAAATGAAAAT  50
      ||||||   |||||||  || |||| ||||||||||| ||||||| ||||
seq2  TAAGTACTAAAATATT--AC-TGAG-TACATGTAAAT-GTAAATG-AAAT  44

seq1  GCAACACTTTTAAAAAGCATA-TAACATGGCATATTACTTGTAAATGTGC  99
      ||||||| ||||||||||||| ||||||| |||| ||||||| |||||||
seq2  GCAACAC-TTTAAAAAGCATATTAACATGCCATA-TACTTGT-AATGTGC  91

seq1  ATTCC-AAAGTTATTGAATTATTTATTCTCTATTAAACCACACATTTGAG  148
      ||||| |||||||||||||||||||||||||| |||||||||||||||||
seq2  ATTCCAAAAGTTATTGAATTATTTATTCTCTA-TAAACCACACATTTGAG  140

seq1  TAAATAAGGTAGAAAAAGTAATATTTAAAAAAAAACTATTGGAACAGAGA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAGGTAGAAAAAGTAATATTTAAAAAAAAACTATTGGAACAGAGA  190

seq1  AAAACAAGGAATAGCCTCCTTTTTCAAAAGTTATATTTCAGTGGAAGGAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAGGAATAGCCTCCTTTTTCAAAAGTTATATTTCAGTGGAAGGAG  240

seq1  ACTTTATAGATTTTAAAATTAGAAATTATGGTAAATTAGAAAGAGATGCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATAGATTTTAAAATTAGAAATTATGGTAAATTAGAAAGAGATGCA  290

seq1  ATGCAGAGAAAGGGGGAAATATATTTGGAATAAGTTCATTTTTACATGGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGAGAAAGGGGGAAATATATTTGGAATAAGTTCATTTTTACATGGG  340

seq1  ATGTTATAAGAGGTATTGTGTGAGAATATTGTTATTGAAAGCAGAGAAAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATAAGAGGTATTGTGTGAGAATATTGTTATTGAAAGCAGAGAAAT  390

seq1  TTTATAATGGAAAACTATTGCAAACACAGTCCATGTAATCAAACTCTTCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAATGGAAAACTATTGCAAACACAGTCCATGTAATCAAACTCTTCC  440

seq1  TTCACTCACTTTATCTGCTAATATAAAAATTGTTTATATAATCTAAAATT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTCACTTTATCTGCTAATATAAAAATTGTTTATATAATCTAAAATT  490

seq1  CATTACATACACTTTTTTTGATTAACATTGAGACCCCTTGGCCAATTACC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACATACACTTTTTTTGATTAACATTGAGACCCCTTGGCCAATTACC  540

seq1  TGAAAATATAAAGCACACAAGAAACCATTACTTCTTAATGAACTAAAAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATATAAAGCACACAAGAAACCATTACTTCTTAATGAACTAAAAAA  590

seq1  CGCTGAGTAGTATTTTAATTGCAGAGTCCCCCAAAGACCGCCGAGGTTTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGAGTAGTATTTTAATTGCAGAGTCCCCCAAAGACCGCCGAGGTTTC  640

seq1  TGGATCTTAATTTGTAAATCAGTTCATCTACCTTCCGGCTCTAGAGGTAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCTTAATTTGTAAATCAGTTCATCTACCTTCCGGCTCTAGAGGTAG  690

seq1  ATGAGGTGTTCTTGCTGACAATGTACAGTAAAGAGTATTGAGCTGGAAAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGTGTTCTTGCTGACAATGTACAGTAAAGAGTATTGAGCTGGAAAG  740

seq1  CATCGTGCAATCAAGTGATCTCCAGTCAAATCATCAAACAGTCTAATTGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGTGCAATCAAGTGATCTCCAGTCAAATCATCAAACAGTCTAATTGT  790

seq1  CTTCTGTTCACAATATATCCTCATTGATAATGTAATAATTAAGACAAAAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTTCACAATATATCCTCATTGATAATGTAATAATTAAGACAAAAT  840

seq1  AAAGCAATAGATAGGACTTCTCTTTCAAGGAAAGGGCTCAAAGAGAAACT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAATAGATAGGACTTCTCTTTCAAGGAAAGGGCTCAAAGAGAAACT  890

seq1  AAGTGAAGGTGAAGCCAATGGTTCATGAAATTAGGCATTGGCTTTGAATT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAAGGTGAAGCCAATGGTTCATGAAATTAGGCATTGGCTTTGAATT  940

seq1  CTGTAGGCTGGCACATTTTTTTCCAAGGTATAATCTGTAACCTTTGCAGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGGCTGGCACATTTTTTTCCAAGGTATAATCTGTAACCTTTGCAGC  990

seq1  ACTAACAAGACTCTTTGGGATGACTAACTTAAATCCACCACAGGCCTTTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACAAGACTCTTTGGGATGACTAACTTAAATCCACCACAGGCCTTTC  1040

seq1  AAGTCATCTGCAGGGAATGACTAAATGCAGGACAATTAGCACAGTGGAAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCATCTGCAGGGAATGACTAAATGCAGGACAATTAGCACAGTGGAAT  1090

seq1  TC  1100
      ||
seq2  TC  1092