BAC Information

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BAC

Clone NameB6Ng01-121E06
Chromosome15 (Build37)
Map Location 99,144,307 - 99,265,039
singlet/doubletdoublet
Overlap genePrpf40b, Fmnl3, Tegt, C230021P08Rik
Upstream geneOlfr284, Olfr283, 1700031M16Rik, LOC100042818, Olfr282, LOC629549, Olfr281, Olfr240-ps1, GA_x5J8B7W76D0-7895713-7896429, Lalba, Olfr234, Olfr278-ps1, 2310037I24Rik, LOC100043418, Ccnt1, 4930415O20Rik, Adcy6, Cacnb3, Ddx23, Rnd1, Ccdc65, Fkbp11, Arf3, 5830427D03Rik, Wnt10b, Wnt1, Ddn, Prkag1, Mll2, Rhebl1, Dhh, Lmbr1l, Tuba1b, Tuba1a, EG668092, Tuba1c, Prph1, Troap, C1ql4, 2810451A06Rik, Spats2, Kcnh3, Mcrs1, EG545136
Downstream gene4930556P03Rik, Faim2, LOC545137, Aqp2, Aqp5, Aqp6, Racgap1, LOC100043473, Accn2, Smarcd1, Gpd1, 2310016M24Rik, Lass5, Lima1, LOC100043481, LOC100042918, 1700030F18Rik, Gm920, D330037H05Rik, 4930478M13Rik, Dip2b, Atf1, 4930478A21Rik, EG432981, Mettl7a, ENSMUSG00000058057, LOC554292, Ubie, Yghl1-4, Slc11a2, EG432982
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121E06.bB6Ng01-121E06.g
ACCDH924993DH924994
length1,1441,120
definitionDH924993|Mus musculus domesticus DNA, BAC clone: B6Ng01-121E06, 5' end.DH924994|Mus musculus domesticus DNA, BAC clone: B6Ng01-121E06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,263,875 - 99,265,039)(99,144,307 - 99,145,452)
sequence
gaattcaaggccagactggtctacagagtgagtccaggacagccaggact
tgttacacagtggaaccctgtcttgtataaataaataaacaaatatccct
tggcagacttaagttttacgtgtcaacagtgagtgacattagttgaagtt
ggtgttactttctaaacagggacgttgagtcacagggcagctggttgacc
agtaaaaaattcgggctctaggcccccatgcagggtgtgtgtgagcgctg
gggttcctataggcacagtctcggcctcaggatgggaagaataaacaaga
gtcacccagcctaaccttgagctgttgcattatcaccagtatagcagagg
tcactagagagttttgtcaccctcctcctgccttctctccttgcctgttc
ctggtctgcctgggagtagcctgccaggcctcattcccagagcctgactc
ccaaggtcatggaccagccggccggaggcaccggaaagctgagggcatcg
gctggtgaggacgacagcatggagctcagcacctgccaggagcttctgca
ccgacttcgggagctggaggtacgcggtggcaggcagggcagggcggggc
atggggagtcagggctgcccaccgctgagctcagtgtggagaaggcttgc
caggcaggagagggctggacggttggttctttattaaagctcccctggga
agccccggttcctcttcactctccagctcgggcgacagtgaagagtacgt
agctgtcctatgccacgagtgtctcttccccacccccaccccacctttac
gaccctactggttccaaggacagtgatatccatagaggctactaggtaaa
acggtcagataaccctggtccaggagtttgatggacagggcaaagcctgt
ccactctgccaccctcgctcccagggtacaaatgagcctcaatgattcct
ctttccacctcaccctacaggcagagactcggcgcttgcgcaggccaatg
agaccagcgggagacttacgaacgctgtctgatgagtctgtggggtttgc
gaagacatgctgggacaggggtgggtgggcaacgcagctcagctccgact
tggtgtccaggtgcaccactggtaaaggctctactgacagaagg
gaattccatttacctatcagcttggccaagtgagattcctctcctgcacc
ttaacttcactagcacatggaggctttttggtgagaaatacagaacctgg
ctgtgtacttaagacaatgaacatgatttaaatattgatggagagctata
cacttgatggccaacatctcttcctggacctatgcattcagggtaggtgt
agtggctgaaagcagatttgggatttagacctgggatatgttagaataag
tgatttcatttttctggtctgcataaaattagaagactgacctagtatga
gaggattagtggagaaacgtgtcaagcactcagcagagaacctactaccc
agtaagcacccagaacatgaggcaaagggtatagaccagatgttaagcat
gcatggcagcttccatgagcagcaggaaggcccagctgtggccagaggaa
caaagacctaattgtaataactcagtcatctatcaagacggaagacactt
gctgactcttttggctccatatgaatccacacaggtcggatggggccagt
aagatgaagacttagcatggtttctaaggtgtgtcacaagtcttatggat
cctatttgagggcagaggccaggcttgaacaccttgcagcctgatccctt
ttgcccactggcctgtggtgcccctggccttcacacactgctgtgcccac
aggatcggggcttctgtgtggaggtgaacacagcatttgaggacttcgcc
cacgtcataagctttgacaagagggctgctgcgctggacgcaggcaacat
caagctgaccttcaatagtgtgaggggacgggcaagcctgggtggtcctc
tcacttaccccaatgtcttgttcctcctaactgccctgctgattatcttg
ggtttgggacacatcttcctacctcttaagtacccctgaccctatctgtt
tccctttgccttcagctgctgaaaagcagagcacgggagaggacgggaaa
agagagcccgaagatgcgcgcaaagaagctgctttcgaagcatgctgagc
agcctgctgctctgggagctggcactgccctggaaaagtcagagccagct
ggccatcaccctcagctgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_99263875_99265039
seq2: B6Ng01-121E06.b_45_1188 (reverse)

seq1  CCTTCTGGTTCAGTAGAGCCTGTACCACGTGGTTGGCAACCTGGGGACAC  50
      |||||||  |||||||||||| ||||| |||||  || ||||  ||||||
seq2  CCTTCTG--TCAGTAGAGCCTTTACCA-GTGGT--GC-ACCT--GGACAC  42

seq1  AAAGTCCGGGAGCTGAGCTGGCGTTTTGCCCACCCACCCCTGTCCCCAGC  100
       |||||  ||||||||||| |||  |||||||||||||||||| ||||| 
seq2  CAAGTC--GGAGCTGAGCT-GCG--TTGCCCACCCACCCCTGT-CCCAG-  85

seq1  CCTGTCCTTCGGCAAACCCCACAGACCTCATCCAGACAGCGTTCGTAAGT  150
      | ||| |||| |||||||||||||| ||||| ||||||||||||||||||
seq2  CATGT-CTTC-GCAAACCCCACAGA-CTCAT-CAGACAGCGTTCGTAAGT  131

seq1  CTCCCGCTGGTTCTCATTGGCCTGCGCAAGCGCCGAGTTCTCTGCCTGTA  200
      |||||||||| |||||||||||||||||||||||||| ||||||||||||
seq2  CTCCCGCTGG-TCTCATTGGCCTGCGCAAGCGCCGAG-TCTCTGCCTGTA  179

seq1  GGGTGAGGTGGAAAGGGGAATCATTGAGGCTCATTTGTACCCTGGGAGCG  250
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GGGTGAGGTGGAAAGAGGAATCATTGAGGCTCATTTGTACCCTGGGAGCG  229

seq1  AGGGTGGCAGAGTGGACAGGCTTTGCCCTGTCCATCAAACTCCTGGACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGGCAGAGTGGACAGGCTTTGCCCTGTCCATCAAACTCCTGGACCA  279

seq1  GGGTTATCTGACCGTTTTACCTAGTAGCCTCTATGGATATCACTGTCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTATCTGACCGTTTTACCTAGTAGCCTCTATGGATATCACTGTCCTT  329

seq1  GGAACCAGTAGGGTCGTAAAGGTGGGGTGGGGGTGGGGAAGAGACACTCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCAGTAGGGTCGTAAAGGTGGGGTGGGGGTGGGGAAGAGACACTCG  379

seq1  TGGCATAGGACAGCTACGTACTCTTCACTGTCGCCCGAGCTGGAGAGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATAGGACAGCTACGTACTCTTCACTGTCGCCCGAGCTGGAGAGTGA  429

seq1  AGAGGAACCGGGGCTTCCCAGGGGAGCTTTAATAAAGAACCAACCGTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAACCGGGGCTTCCCAGGGGAGCTTTAATAAAGAACCAACCGTCCA  479

seq1  GCCCTCTCCTGCCTGGCAAGCCTTCTCCACACTGAGCTCAGCGGTGGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCTCCTGCCTGGCAAGCCTTCTCCACACTGAGCTCAGCGGTGGGCA  529

seq1  GCCCTGACTCCCCATGCCCCGCCCTGCCCTGCCTGCCACCGCGTACCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGACTCCCCATGCCCCGCCCTGCCCTGCCTGCCACCGCGTACCTCC  579

seq1  AGCTCCCGAAGTCGGTGCAGAAGCTCCTGGCAGGTGCTGAGCTCCATGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCCGAAGTCGGTGCAGAAGCTCCTGGCAGGTGCTGAGCTCCATGCT  629

seq1  GTCGTCCTCACCAGCCGATGCCCTCAGCTTTCCGGTGCCTCCGGCCGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGTCCTCACCAGCCGATGCCCTCAGCTTTCCGGTGCCTCCGGCCGGCT  679

seq1  GGTCCATGACCTTGGGAGTCAGGCTCTGGGAATGAGGCCTGGCAGGCTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCATGACCTTGGGAGTCAGGCTCTGGGAATGAGGCCTGGCAGGCTAC  729

seq1  TCCCAGGCAGACCAGGAACAGGCAAGGAGAGAAGGCAGGAGGAGGGTGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGCAGACCAGGAACAGGCAAGGAGAGAAGGCAGGAGGAGGGTGAC  779

seq1  AAAACTCTCTAGTGACCTCTGCTATACTGGTGATAATGCAACAGCTCAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCTCTAGTGACCTCTGCTATACTGGTGATAATGCAACAGCTCAAG  829

seq1  GTTAGGCTGGGTGACTCTTGTTTATTCTTCCCATCCTGAGGCCGAGACTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGCTGGGTGACTCTTGTTTATTCTTCCCATCCTGAGGCCGAGACTG  879

seq1  TGCCTATAGGAACCCCAGCGCTCACACACACCCTGCATGGGGGCCTAGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTATAGGAACCCCAGCGCTCACACACACCCTGCATGGGGGCCTAGAG  929

seq1  CCCGAATTTTTTACTGGTCAACCAGCTGCCCTGTGACTCAACGTCCCTGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAATTTTTTACTGGTCAACCAGCTGCCCTGTGACTCAACGTCCCTGT  979

seq1  TTAGAAAGTAACACCAACTTCAACTAATGTCACTCACTGTTGACACGTAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAGTAACACCAACTTCAACTAATGTCACTCACTGTTGACACGTAA  1029

seq1  AACTTAAGTCTGCCAAGGGATATTTGTTTATTTATTTATACAAGACAGGG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAAGTCTGCCAAGGGATATTTGTTTATTTATTTATACAAGACAGGG  1079

seq1  TTCCACTGTGTAACAAGTCCTGGCTGTCCTGGACTCACTCTGTAGACCAG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTGTGTAACAAGTCCTGGCTGTCCTGGACTCACTCTGTAGACCAG  1129

seq1  TCTGGCCTTGAATTC  1165
      |||||||||||||||
seq2  TCTGGCCTTGAATTC  1144

seq1: chr15_99144307_99145452
seq2: B6Ng01-121E06.g_65_1184

seq1  GAATTCCATTTACCTATCAGCTTGGCCAAGTGAGATTCCTCTCCTGCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTTACCTATCAGCTTGGCCAAGTGAGATTCCTCTCCTGCACC  50

seq1  TTAACTTCACTAGCACATGGAGGCTTTTTGGTGAGAAATACAGAACCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTCACTAGCACATGGAGGCTTTTTGGTGAGAAATACAGAACCTGG  100

seq1  CTGTGTACTTAAGACAATGAACATGATTTAAATATTGATGGAGAGCTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTACTTAAGACAATGAACATGATTTAAATATTGATGGAGAGCTATA  150

seq1  CACTTGATGGCCAACATCTCTTCCTGGACCTATGCATTCAGGGTAGGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGATGGCCAACATCTCTTCCTGGACCTATGCATTCAGGGTAGGTGT  200

seq1  AGTGGCTGAAAGCAGATTTGGGATTTAGACCTGGGATATGTTAGAATAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTGAAAGCAGATTTGGGATTTAGACCTGGGATATGTTAGAATAAG  250

seq1  TGATTTCATTTTTCTGGTCTGCATAAAATTAGAAGACTGACCTAGTATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCATTTTTCTGGTCTGCATAAAATTAGAAGACTGACCTAGTATGA  300

seq1  GAGGATTAGTGGAGAAACGTGTCAAGCACTCAGCAGAGAACCTACTACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTAGTGGAGAAACGTGTCAAGCACTCAGCAGAGAACCTACTACCC  350

seq1  AGTAAGCACCCAGAACATGAGGCAAAGGGTATAGACCAGATGTTAAGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGCACCCAGAACATGAGGCAAAGGGTATAGACCAGATGTTAAGCAT  400

seq1  GCATGGCAGCTTCCATGAGCAGCAGGAAGGCCCAGCTGTGGCCAGAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGCAGCTTCCATGAGCAGCAGGAAGGCCCAGCTGTGGCCAGAGGAA  450

seq1  CAAAGACCTAATTGTAATAACTCAGTCATCTATCAAGACGGAAGACACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACCTAATTGTAATAACTCAGTCATCTATCAAGACGGAAGACACTT  500

seq1  GCTGACTCTTTTGGCTCCATATGAATCCACACAGGTCGGATGGGGCCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTCTTTTGGCTCCATATGAATCCACACAGGTCGGATGGGGCCAGT  550

seq1  AAGATGAAGACTTAGCATGGTTTCTAAGGTGTGTCACAAGTCTTATGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGAAGACTTAGCATGGTTTCTAAGGTGTGTCACAAGTCTTATGGAT  600

seq1  CCTATTTGAGGGCAGAGGCCAGGCTTGAACACCTTGCAGCCTGATCCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTGAGGGCAGAGGCCAGGCTTGAACACCTTGCAGCCTGATCCCTT  650

seq1  TTGCCCACTGGCCTGTGGTGCCCCTGGCCTTCACACACTGCTGTGCCCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCACTGGCCTGTGGTGCCCCTGGCCTTCACACACTGCTGTGCCCAC  700

seq1  AGGATCGGGGCTTCTGTGTGGAGGTGAACACAGCATTTGAGGACTTCGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCGGGGCTTCTGTGTGGAGGTGAACACAGCATTTGAGGACTTCGCC  750

seq1  CACGTCATAAGCTTTGACAAGAGGGCTGCTGCGCTGGACGCAGGCAACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTCATAAGCTTTGACAAGAGGGCTGCTGCGCTGGACGCAGGCAACAT  800

seq1  CAAGCTGACCTTCAATAGTGTGAGGGGACGGGCAAGCCTGGGTGGTCCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTGACCTTCAATAGTGTGAGGGGACGGGCAAGCCTGGGTGGTCCTC  850

seq1  TCACTTACCCCAATGTCTTGTTCCTCCTAACTGCCCTGCTGATTATCTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTACCCCAATGTCTTGTTCCTCCTAACTGCCCTGCTGATTATCTTG  900

seq1  GGTTTGGGACACATCTTCCTACCTCTTAAGGTACCCCTGACCCTATTCTG  950
      ||||||||||||||||||||||||||||| ||||||||||||||| ||||
seq2  GGTTTGGGACACATCTTCCTACCTCTTAA-GTACCCCTGACCCTA-TCTG  948

seq1  TTTCCCTTTGCCTTCAGCTGCTGGAAAAAGCAGAGGCACGGGAGAGGGAA  1000
      |||||||||||||||||||||||  ||||||||| ||||||||||||  |
seq2  TTTCCCTTTGCCTTCAGCTGCTG--AAAAGCAGA-GCACGGGAGAGG--A  993

seq1  CGGGAAAAGGAGGAGGCCCGAAGGATGCGGCGCAGAGAAGCTGCCTTTCG  1050
      |||||||| |||   ||||||| ||||| ||||| |||||||| ||||||
seq2  CGGGAAAA-GAG--AGCCCGAA-GATGC-GCGCAAAGAAGCTG-CTTTCG  1037

seq1  AAGCATGCTGAGGCAGGCCGTGCCTGCTCT-GGAGCTGGGCACTGCCTGG  1099
      ||||||||||| |||| | |   ||||||| |||||| |||||||||  |
seq2  AAGCATGCTGA-GCAGCCTG---CTGCTCTGGGAGCT-GGCACTGCCCTG  1082

seq1  GAAGAGGTCAGAAGCACAGCCTGGCCCCAATCACCCTCAGGCCTGAG  1146
      ||| | ||||| ||| ||| ||||||   |||||||||||  |||||
seq2  GAA-AAGTCAG-AGC-CAG-CTGGCC---ATCACCCTCAG--CTGAG  1120