BAC Information

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BAC

Clone NameB6Ng01-121H04
Chromosome15 (Build37)
Map Location 75,589,698 - 75,752,469
singlet/doubletdoublet
Overlap geneZc3h3, LOC672572, Gsdmdc1, Naprt1, Eef1d, Tigd5, Pycrl
Upstream geneLy6d, D730001G18Rik, Ly6k, Gml, Hemt1, Cyp11b1, Cyp11b2, 2010109I03Rik, LOC625653, Ly6e, Ly6i, LOC666240, LOC100041528, Ly6a, Ly6c, LOC546642, EG625737, LOC100041546, I830127L07Rik, LOC100041070, LOC546644, LOC100041087, BC025446, LOC100041092, Ly6f, LOC100041652, LOC100041107, 9030619P08Rik, Ly6h, Gpihbp1, Zfp41, 2810039B14Rik, Top1mt, Rhpn1, Mafa
Downstream geneTsta3, Zfp623, Eif2s3x-ps1, Zfp707, 2410075B13Rik, Mapk15, AA409316, K230010J24Rik, Scrib, 2410104I19Rik, Nrbp2, Eppk1, BC024139, Plec1, LOC671535, Grina, Spatc1, LOC100041269, Oplah, Exosc4, Gpaa1, Cyc1, Sharpin, Maf1, EG626280, Brp16, Tssk5, Bop1, Scx, Hsf1, Dgat1, Scrt1, LOC666497, EG666504, Fbxl6, Gpr172b, Adck5, Cpsf1, Slc39a4, Vps28, Nfkbil2, Cyhr1, Kifc2, Foxh1, Ppp1r16a, Gpt1, Mfsd3, Recql4, Lrrc14, Lrrc24, C030006K11Rik, D15Wsu169e, Zfp251, Zfp7, Commd5, Rpl8, Zfp647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121H04.bB6Ng01-121H04.g
ACCDH925130DH925131
length1,0661,009
definitionDH925130|Mus musculus domesticus DNA, BAC clone: B6Ng01-121H04, 5' end.DH925131|Mus musculus domesticus DNA, BAC clone: B6Ng01-121H04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,589,698 - 75,590,769)(75,751,457 - 75,752,469)
sequence
gaattctattctccattgataacatgctaattttttgatacattgagtga
aaaataatgtttatttgtttccctccacattttcttttttacacatgtgt
gtttttccctgaaagtgttaacctggtctaatacccttgaaaaactccca
aaatgctgggaaaagtgaagaccttccttagaccatgcacgagctatgat
gagaaagcatgatgagaaaaaactcctaggtagcagagacagggaccacc
ttactcgcaaggcttcaaaggcctggccagcaatctaaacaaggacctgg
agtttaggctctcactttatataagcagaaaaggaaccaaagaaatgtga
aggaaagaagcaaggcacagcagggagtaaagccagggcactccaacggt
gctgctcctcgtaactagtaacacgaggacagaagcaatgcttgcacagg
aggaaggccagatgaggaggacactgggacaggaggaggccacaactcag
taggagagcataagccacggctgtagtcggtaaagtcttaggttcaatca
tttacatttaaaaacaaacaaacaaacaaacaaaaagaccacctgaccct
agaggccttgcaggtgtggctgctgtgtcacatgtgcatcagtaggtggc
agagaggagagagattacatctatgctgtgggttatgacctatgatatct
gagtaattagtagtctaatattccctgaaaaaggggaacctgagatgacc
gagactagaagaaccccacctaggacaatggctccaggtaggagtgagct
caagacagatgacctttgagggtcactcaggcaggctgagcgaggagcaa
accaaaggaccgccagaccagtgccattgggtcggacagggaaccagcct
gagactaccaccagtctggtgccacaccaggtgggcagggaggcagacca
tgcccagatgacccactgcctggaacataatgtatgagtggcccagagta
ctcctgaaaccactcctgagatgaccccagacactcagagacccagcaca
ctaagaggagcagtga
gaattcaatacagataactattttggtgagacactaaagcactcaaaagt
tttttttaaattaaaaaataagtgctgtgtattagtgactgatggttagt
gctgcttttaatgtagagaaccagaacccactccgaggactgaacccaag
gcacccaagctaggcaagagcttggagtacctaccttacaccccaggccc
atcctggagtggttcaagcgttttttggtttttgttttttttgtttttct
ccccctctaaatctctctgtaagggttttggagagactctagctagcttc
aggcttctcaggaggaattagacagcctgcttaggactagctccccttcc
tttctcttctttcccctcagcaaaatcactgaccaatggtttaccaaagc
ttgggggaaatcccgcctcaagcgtcaaaatccaagtgtctgcgcccgcc
ccgccccgccccgccccgcccctctgtcctcccaaacccgcccagtcgct
tctgtcggtcaaagcagttctagtgggcgggacccgctgccgcaaggacg
agagaaggccagctcagagcaggatggcggcgacaatgtctgaacctcgg
cgtgtgggcttcgtgggtgcaggccgcatggcggaggccattgcccgagg
cctcatccaagcaggtgggaggcgaggcctggctgggggagctttcgttc
taatgggaggagttcgtaagccttggcgggaggggcgcacgtggtacacc
aagggccagtagggtgaattcgctggtttcctgggtgagaatcatacatc
aggactctattaaggcctccaggatcgctggatgagtccgcagtcccttc
ccaggccggtgagtgggcatgttaggcgaggtgtgggggaaaaaacctaa
aaaaactcagttcattatttaacattgatgtattggtgaatattctttaa
atgtattgcattaaagaatattacgatgacttcacgtgtgacttctttgt
agtggagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_75589698_75590769
seq2: B6Ng01-121H04.b_49_1114

seq1  GAATTCTATTCTCCATTGATAACATGCTAATTTTTTGATACATTGAGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTCTCCATTGATAACATGCTAATTTTTTGATACATTGAGTGA  50

seq1  AAAATAATGTTTATTTGTTTCCCTCCACATTTTCTTTTTTACACATGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATGTTTATTTGTTTCCCTCCACATTTTCTTTTTTACACATGTGT  100

seq1  GTTTTTCCCTGAAAGTGTTAACCTGGTCTAATACCCTTGAAAAACTCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCCCTGAAAGTGTTAACCTGGTCTAATACCCTTGAAAAACTCCCA  150

seq1  AAATGCTGGGAAAAGTGAAGACCTTCCTTAGACCATGCACGAGCTATGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTGGGAAAAGTGAAGACCTTCCTTAGACCATGCACGAGCTATGAT  200

seq1  GAGAAAGCATGATGAGAAAAAACTCCTAGGTAGCAGAGACAGGGACCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGCATGATGAGAAAAAACTCCTAGGTAGCAGAGACAGGGACCACC  250

seq1  TTACTCGCAAGGCTTCAAAGGCCTGGCCAGCAATCTAAACAAGGACCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCGCAAGGCTTCAAAGGCCTGGCCAGCAATCTAAACAAGGACCTGG  300

seq1  AGTTTAGGCTCTCACTTTATATAAGCAGAAAAGGAACCAAAGAAATGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAGGCTCTCACTTTATATAAGCAGAAAAGGAACCAAAGAAATGTGA  350

seq1  AGGAAAGAAGCAAGGCACAGCAGGGAGTAAAGCCAGGGCACTCCAACGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGAAGCAAGGCACAGCAGGGAGTAAAGCCAGGGCACTCCAACGGT  400

seq1  GCTGCTCCTCGTAACTAGTAACACGAGGACAGAAGCAATGCTTGCACAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTCCTCGTAACTAGTAACACGAGGACAGAAGCAATGCTTGCACAGG  450

seq1  AGGAAGGCCAGATGAGGAGGACACTGGGACAGGAGGAGGCCACAACTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGCCAGATGAGGAGGACACTGGGACAGGAGGAGGCCACAACTCAG  500

seq1  TAGGAGAGCATAAGCCACGGCTGTAGTCGGTAAAGTCTTAGGTTCAATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGAGCATAAGCCACGGCTGTAGTCGGTAAAGTCTTAGGTTCAATCA  550

seq1  TTTACATTTAAAAACAAACAAACAAACAAACAAAAAGACCACCTGACCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATTTAAAAACAAACAAACAAACAAACAAAAAGACCACCTGACCCT  600

seq1  AGAGGCCTTGCAGGTGTGGCTGCTGTGTCACATGTGCATCAGTAGGTGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCCTTGCAGGTGTGGCTGCTGTGTCACATGTGCATCAGTAGGTGGC  650

seq1  AGAGAGGAGAGAGATTACATCTATGCTGTGGGTTATGACCTATGATATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGAGAGAGATTACATCTATGCTGTGGGTTATGACCTATGATATCT  700

seq1  GAGTAATTAGTAGTCTAATATTCCCTGAAAAAGGGGAACCTGAGATGACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAATTAGTAGTCTAATATTCCCTGAAAAAGGGGAACCTGAGATGACC  750

seq1  GAGACTAGAAGAACCCCACCTAGGACAATGGCTCCAGGTAGGAGTGAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTAGAAGAACCCCACCTAGGACAATGGCTCCAGGTAGGAGTGAGCT  800

seq1  CAAGACAGATGACCTTTGAGGGTCACTCAGGCAGGCTGAGCGAGGAGCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACAGATGACCTTTGAGGGTCACTCAGGCAGGCTGAGCGAGGAGCAA  850

seq1  ACCAAAGGACCGCCAGACCAGTGCCATTGGGTCGGACAGGGAACCAGCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGGACCGCCAGACCAGTGCCATTGGGTCGGACAGGGAACCAGCCT  900

seq1  GAGACTACCACCAGTCTGGTGCCACACCAGGTGGGCAGGGAGGCAGACCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTACCACCAGTCTGGTGCCACACCAGGTGGGCAGGGAGGCAGACCA  950

seq1  TGCCCAAGATGACCCACTGCCTGGAACCATAATGTATGAGTGGCCCAGAG  1000
      ||||| |||||||||||||||||||| |||||||||||||||||||||||
seq2  TGCCC-AGATGACCCACTGCCTGGAA-CATAATGTATGAGTGGCCCAGAG  998

seq1  TACTCCTGAAACCACTCCTGAGATGACCCCAGACACTCAGAGAACCCAGG  1050
      |||||||||||||||||||||||||||||||||||||||||| ||||| |
seq2  TACTCCTGAAACCACTCCTGAGATGACCCCAGACACTCAGAG-ACCCA-G  1046

seq1  CACCACTAAGAGGAGCAAGTGA  1072
      || ||||||||||||| |||||
seq2  CA-CACTAAGAGGAGC-AGTGA  1066

seq1: chr15_75751457_75752469
seq2: B6Ng01-121H04.g_67_1075 (reverse)

seq1  AACTCCACTACAAAGAAGTCACACGTGAAGTCAATCGTAATATTCTTTAA  50
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AACTCCACTACAAAGAAGTCACACGTGAAGTC-ATCGTAATATTCTTTAA  49

seq1  TGCAATACATTTAAAGGAATATTCACCAATACAATCAATGTTAAATAAAT  100
      ||||||||||||||| |||||||||||||||| ||||||||||||| |||
seq2  TGCAATACATTTAAA-GAATATTCACCAATAC-ATCAATGTTAAAT-AAT  96

seq1  GAACTGGTTTTTTTTGGTTTTTTTCCCCCACACCTCGCCTAACATGCCCA  150
      ||||||  ||||||| | ||||||||||||||||||||||||||||||||
seq2  GAACTGAGTTTTTTTAGGTTTTTTCCCCCACACCTCGCCTAACATGCCCA  146

seq1  CTCACCGGCCTGGGAAGGGACTGCGGACTCATCCAGCGATCCTGGAGGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCGGCCTGGGAAGGGACTGCGGACTCATCCAGCGATCCTGGAGGCC  196

seq1  TTAATAGAGTCCTGATGTATGATTCTCACCCAGGAAACCAGCGAATTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAGAGTCCTGATGTATGATTCTCACCCAGGAAACCAGCGAATTCAC  246

seq1  CCTACTGGCCCTTGGTGTACCACGTGCGCCCCTCCCGCCAAGGCTTACGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTGGCCCTTGGTGTACCACGTGCGCCCCTCCCGCCAAGGCTTACGA  296

seq1  ACTCCTCCCATTAGAACGAAAGCTCCCCCAGCCAGGCCTCGCCTCCCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTCCCATTAGAACGAAAGCTCCCCCAGCCAGGCCTCGCCTCCCACC  346

seq1  TGCTTGGATGAGGCCTCGGGCAATGGCCTCCGCCATGCGGCCTGCACCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGGATGAGGCCTCGGGCAATGGCCTCCGCCATGCGGCCTGCACCCA  396

seq1  CGAAGCCCACACGCCGAGGTTCAGACATTGTCGCCGCCATCCTGCTCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGCCCACACGCCGAGGTTCAGACATTGTCGCCGCCATCCTGCTCTGA  446

seq1  GCTGGCCTTCTCTCGTCCTTGCGGCAGCGGGTCCCGCCCACTAGAACTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCCTTCTCTCGTCCTTGCGGCAGCGGGTCCCGCCCACTAGAACTGC  496

seq1  TTTGACCGACAGAAGCGACTGGGCGGGTTTGGGAGGACAGAGGGGCGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACCGACAGAAGCGACTGGGCGGGTTTGGGAGGACAGAGGGGCGGGG  546

seq1  CGGGGCGGGGCGGGGCGGGCGCAGACACTTGGATTTTGACGCTTGAGGCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGCGGGGCGGGGCGGGCGCAGACACTTGGATTTTGACGCTTGAGGCG  596

seq1  GGATTTCCCCCAAGCTTTGGTAAACCATTGGTCAGTGATTTTGCTGAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCCCCCAAGCTTTGGTAAACCATTGGTCAGTGATTTTGCTGAGGG  646

seq1  GAAAGAAGAGAAAGGAAGGGGAGCTAGTCCTAAGCAGGCTGTCTAATTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAGAGAAAGGAAGGGGAGCTAGTCCTAAGCAGGCTGTCTAATTCC  696

seq1  TCCTGAGAAGCCTGAAGCTAGCTAGAGTCTCTCCAAAACCCTTACAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGAAGCCTGAAGCTAGCTAGAGTCTCTCCAAAACCCTTACAGAGA  746

seq1  GATTTAGAGGGGGAGAAAAACAAAAAAAACAAAAACCAAAAAACGCTTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAGAGGGGGAGAAAAACAAAAAAAACAAAAACCAAAAAACGCTTGA  796

seq1  ACCACTCCAGGATGGGCCTGGGGTGTAAGGTAGGTACTCCAAGCTCTTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTCCAGGATGGGCCTGGGGTGTAAGGTAGGTACTCCAAGCTCTTGC  846

seq1  CTAGCTTGGGTGCCTTGGGTTCAGTCCTCGGAGTGGGTTCTGGTTCTCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTTGGGTGCCTTGGGTTCAGTCCTCGGAGTGGGTTCTGGTTCTCTA  896

seq1  CATTAAAAGCAGCACTAACCATCAGTCACTAATACACAGCACTTATTTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAAAGCAGCACTAACCATCAGTCACTAATACACAGCACTTATTTTT  946

seq1  TAATTTAAAAAAAACTTTTGAGTGCTTTAGTGTCTCACCAAAATAGTTAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAAAAAAAACTTTTGAGTGCTTTAGTGTCTCACCAAAATAGTTAT  996

seq1  CTGTATTGAATTC  1013
      |||||||||||||
seq2  CTGTATTGAATTC  1009