BAC Information

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BAC

Clone NameB6Ng01-121N23
Chromosome15 (Build37)
Map Location 51,988,781 - 52,148,719
singlet/doubletdoublet
Overlap geneLOC665219, Slc30a8
Upstream geneLOC100039662, Eif3s3, LOC100039679, D530033C11Rik, Rad21, Aard, LOC100039720
Downstream geneLOC100039748, Thrap6, LOC100039745, Ext1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121N23.bB6Ng01-121N23.g
ACCDH925444DH925445
length9231,101
definitionDH925444|Mus musculus domesticus DNA, BAC clone: B6Ng01-121N23, 5' end.DH925445|Mus musculus domesticus DNA, BAC clone: B6Ng01-121N23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,988,781 - 51,989,704)(52,147,611 - 52,148,719)
sequence
gaattcaggtgtggagtggagaggatttcctcagctcttgtccaggctcc
accacccagactgactgcaggaggaatttgtatgtaacagattttagaat
ctgcctgtaagaagctctggctgttgaatggatgagggctgaagtatttt
aagccaaaacacattacgtgttggtttctttatgttttaaatctcctgtg
ttttagggagaagtgagttgcttttgccatctataataagatctatttca
gttagtgtcttcaccaacccctcccccttagtattttcatttcagccaca
gatagctaaaatattggccagtgaaggaaaacagatttcccaatgaatag
ctctacactatgagaaaatgagattagagagatgcctaaactaatttcag
gttattacactcttcatctctagcctaattctctgtactttcactcctgg
tttatggacagaaatttaaagccagtacattttatcatctgtatccttta
gttcccttttgagtgaagcattgcaatgtcctctttaatttccatgagaa
caaatttcacctttattacattcaaagacaattatggtgtcttcatgaaa
aatgatgtcttccagataccagcaataaaacagcaatgtcctaatgccaa
taaatgtatgagccgtatcagtcagctttcagctttgcttgctttgtttt
gaaaagcacagaaaccttcgggtttttaatttgtgagctatgcagaagcg
ctttatatcatccactgggtggacggtcaggaaatggagcatgatcaagc
gactgtcccactacaggcaaaattacttgggtaaagcctaaatcagactg
gtggcacacccttccatcttcccctagctctgtatcttactctgtgtgtg
cacaggagtttgcatgaatgtgt
gaattcaaattaacccacctctttttcccaatttgaaaaataactgagac
cataacagtaactaaatttaagcacataaatataaatgttcagggcgtca
tttctgaggccatggatatatagcaataggaattatgaagcaaatagaaa
cagcatctcaattatgctaggcaggaagtctcacgaacggacctataagt
acatatggctgtagatgcattggctagattcacggggtctcataatccag
gctgtagacttgaacttctacctggcaagcagcattgcaatctggctcat
agtcttgctatttatttgtaattttaccatagcctttactgccactcttt
gttgtgctgaattactagctgcactggagatccatgttataaatggtggg
agagcagaacagaatggagaaatgaaggtatgtccagtggacataccaaa
gtcatgaacaatctgacgaagcataggacagagaaaagcaggcccacacg
gccaccttgcttttctggacattggtgacttccctctttctctcctttga
aaacacctccagcctccagaagagaaattaaaggagtgttgtgtcctttc
ttcctgagcgtggcttctttgagagcaataacctctattgctctccctac
ctctttccagcaaagagtgtgtgctgactgatgagtcattcctgccactg
tttattgccttgtgtactacagagcagcagagaccatcagtcatcagacc
ctccatcatcagactcaccttgtctcgcttaatgattaaaaaaaaattgc
atagatggctcatcattgcaataatccccacagaccggtggctcgagctg
tacttaataactggtttgtcaaagtttaatgatctgaagcaaagtagtct
tcaggcgtgttacagagctgtccgtgcaaatcagaatgattcattagcca
aaaggcacatttgctaacaaatcagctgtctcattatcctctatgttcct
cgatctggcagacctcggtctgataataagctggtgttataatgcattat
ttcttgcctgagaaaaaactacattgcgataagacagcatgcctgcaatt
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_51988781_51989704
seq2: B6Ng01-121N23.b_47_969

seq1  GAATTCAGGTGTGGAGTGGAGAGGATTTCCTCAGCTCTTGTCCAGGCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTGTGGAGTGGAGAGGATTTCCTCAGCTCTTGTCCAGGCTCC  50

seq1  ACCACCCAGACTGACTGCAGGAGGAATTTGTATGTAACAGATTTTAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCCAGACTGACTGCAGGAGGAATTTGTATGTAACAGATTTTAGAAT  100

seq1  CTGCCTGTAAGAAGCTCTGGCTGTTGAATGGATGAGGGCTGAAGTATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGTAAGAAGCTCTGGCTGTTGAATGGATGAGGGCTGAAGTATTTT  150

seq1  AAGCCAAAACACATTACGTGTTGGTTTCTTTATGTTTTAAATCTCCTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAAAACACATTACGTGTTGGTTTCTTTATGTTTTAAATCTCCTGTG  200

seq1  TTTTAGGGAGAAGTGAGTTGCTTTTGCCATCTATAATAAGATCTATTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGGGAGAAGTGAGTTGCTTTTGCCATCTATAATAAGATCTATTTCA  250

seq1  GTTAGTGTCTTCACCAACCCCTCCCCCTTAGTATTTTCATTTCAGCCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTGTCTTCACCAACCCCTCCCCCTTAGTATTTTCATTTCAGCCACA  300

seq1  GATAGCTAAAATATTGGCCAGTGAAGGAAAACAGATTTCCCAATGAATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCTAAAATATTGGCCAGTGAAGGAAAACAGATTTCCCAATGAATAG  350

seq1  CTCTACACTATGAGAAAATGAGATTAGAGAGATGCCTAAACTAATTTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACACTATGAGAAAATGAGATTAGAGAGATGCCTAAACTAATTTCAG  400

seq1  GTTATTACACTCTTCATCTCTAGCCTAATTCTCTGTACTTTCACTCCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTACACTCTTCATCTCTAGCCTAATTCTCTGTACTTTCACTCCTGG  450

seq1  TTTATGGACAGAAATTTAAAGCCAGTACATTTTATCATCTGTATCCTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGGACAGAAATTTAAAGCCAGTACATTTTATCATCTGTATCCTTTA  500

seq1  GTTCCCTTTTGAGTGAAGCATTGCAATGTCCTCTTTAATTTCCATGAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCTTTTGAGTGAAGCATTGCAATGTCCTCTTTAATTTCCATGAGAA  550

seq1  CAAATTTCACCTTTATTACATTCAAAGACAATTATGGTGTCTTCATGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTCACCTTTATTACATTCAAAGACAATTATGGTGTCTTCATGAAA  600

seq1  AATGATGTCTTCCAGATACCAGCAATAAAACAGCAATGTCCTAATGCCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGTCTTCCAGATACCAGCAATAAAACAGCAATGTCCTAATGCCAA  650

seq1  TAAATGTATGAGCCGTATCAGTCAGCTTTCAGCTTTGCTTGCTTTGTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTATGAGCCGTATCAGTCAGCTTTCAGCTTTGCTTGCTTTGTTTT  700

seq1  GAAAAGCACAGAAACCTTCGGGTTTTTAATTTGTGAGCTATGCAGAAGCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCACAGAAACCTTCGGGTTTTTAATTTGTGAGCTATGCAGAAGCG  750

seq1  CTTTATATCATCCACTGGGTGGACGGTCAGGAAATGGAGCATGATCAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATATCATCCACTGGGTGGACGGTCAGGAAATGGAGCATGATCAAGC  800

seq1  GACTGTCCCACTACAGGCAAAATTACTTGGGTAAGGCCTAAATCAGACTG  850
      |||||||||||||||||||||||||||||||||| |||||||||||||| 
seq2  GACTGTCCCACTACAGGCAAAATTACTTGGGTAAAGCCTAAATCAGACT-  849

seq1  GGTGGCACACCCTTCCATCTTCCCCTAGCTCTGTATCTTACTCTGTGTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCACACCCTTCCATCTTCCCCTAGCTCTGTATCTTACTCTGTGTGT  899

seq1  GCACAGGAGTTTGCATGAATGTGT  924
      ||||||||||||||||||||||||
seq2  GCACAGGAGTTTGCATGAATGTGT  923

seq1: chr15_52147611_52148719
seq2: B6Ng01-121N23.g_68_1168 (reverse)

seq1  AAATTGCA-GCATGCTG-CTTATCTGCATGTAGTTATTCTCCAGGCAAGA  48
      |||||||| |||||||| ||||||   |||||||| ||   |||||||||
seq2  AAATTGCAGGCATGCTGTCTTATCGCAATGTAGTTTTTTCTCAGGCAAGA  50

seq1  AATAATGCATTATTAACA-CAGCTTTATTATCAGGACCGA-GTCTGGCAG  96
      |||||||||||| ||||| |||| ||||||||| |||||| ||||| |||
seq2  AATAATGCATTA-TAACACCAGC-TTATTATCA-GACCGAGGTCTGCCAG  97

seq1  ATCGAGGAACATTAGAGGATAATTGGAAGGACAGCTGATTTGTTAGCAAA  146
      ||||||||||| |||||||||||  ||  |||||||||||||||||| ||
seq2  ATCGAGGAACA-TAGAGGATAAT--GA--GACAGCTGATTTGTTAGC-AA  141

seq1  ATGTTGCCTTTTGGCTAATGAATCATTCTGATTTTTGCACGGACAGCTCT  196
      ||| |||||||||||||||||||||||||||  |||||||||||||||||
seq2  ATG-TGCCTTTTGGCTAATGAATCATTCTGA--TTTGCACGGACAGCTCT  188

seq1  GTAACACGCCTGAAGACTACTTTGCTTCAGATCATTAAACTTTGACAAAC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACACGCCTGAAGACTACTTTGCTTCAGATCATTAAACTTTGACAAAC  238

seq1  CAGTTATTAAGTACAGCTCGAGCCACCGGTCTGTGGGGATTATTGCAATG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTATTAAGTACAGCTCGAGCCACCGGTCTGTGGGGATTATTGCAATG  288

seq1  ATGAGCCATCTATGCAATTTTTTTTTAATCATTAAGCGAGACAAGGTGAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCCATCTATGCAATTTTTTTTTAATCATTAAGCGAGACAAGGTGAG  338

seq1  TCTGATGATGGAGGGTCTGATGACTGATGGTCTCTGCTGCTCTGTAGTAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATGATGGAGGGTCTGATGACTGATGGTCTCTGCTGCTCTGTAGTAC  388

seq1  ACAAGGCAATAAACAGTGGCAGGAATGACTCATCAGTCAGCACACACTCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGCAATAAACAGTGGCAGGAATGACTCATCAGTCAGCACACACTCT  438

seq1  TTGCTGGAAAGAGGTAGGGAGAGCAATAGAGGTTATTGCTCTCAAAGAAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGAAAGAGGTAGGGAGAGCAATAGAGGTTATTGCTCTCAAAGAAG  488

seq1  CCACGCTCAGGAAGAAAGGACACAACACTCCTTTAATTTCTCTTCTGGAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGCTCAGGAAGAAAGGACACAACACTCCTTTAATTTCTCTTCTGGAG  538

seq1  GCTGGAGGTGTTTTCAAAGGAGAGAAAGAGGGAAGTCACCAATGTCCAGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGGTGTTTTCAAAGGAGAGAAAGAGGGAAGTCACCAATGTCCAGA  588

seq1  AAAGCAAGGTGGCCGTGTGGGCCTGCTTTTCTCTGTCCTATGCTTCGTCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAGGTGGCCGTGTGGGCCTGCTTTTCTCTGTCCTATGCTTCGTCA  638

seq1  GATTGTTCATGACTTTGGTATGTCCACTGGACATACCTTCATTTCTCCAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTTCATGACTTTGGTATGTCCACTGGACATACCTTCATTTCTCCAT  688

seq1  TCTGTTCTGCTCTCCCACCATTTATAACATGGATCTCCAGTGCAGCTAGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCTGCTCTCCCACCATTTATAACATGGATCTCCAGTGCAGCTAGT  738

seq1  AATTCAGCACAACAAAGAGTGGCAGTAAAGGCTATGGTAAAATTACAAAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGCACAACAAAGAGTGGCAGTAAAGGCTATGGTAAAATTACAAAT  788

seq1  AAATAGCAAGACTATGAGCCAGATTGCAATGCTGCTTGCCAGGTAGAAGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGCAAGACTATGAGCCAGATTGCAATGCTGCTTGCCAGGTAGAAGT  838

seq1  TCAAGTCTACAGCCTGGATTATGAGACCCCGTGAATCTAGCCAATGCATC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTCTACAGCCTGGATTATGAGACCCCGTGAATCTAGCCAATGCATC  888

seq1  TACAGCCATATGTACTTATAGGTCCGTTCGTGAGACTTCCTGCCTAGCAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCCATATGTACTTATAGGTCCGTTCGTGAGACTTCCTGCCTAGCAT  938

seq1  AATTGAGATGCTGTTTCTATTTGCTTCATAATTCCTATTGCTATATATCC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAGATGCTGTTTCTATTTGCTTCATAATTCCTATTGCTATATATCC  988

seq1  ATGGCCTCAGAAATGACGCCCTGAACATTTATATTTATGTGCTTAAATTT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTCAGAAATGACGCCCTGAACATTTATATTTATGTGCTTAAATTT  1038

seq1  AGTTACTGTTATGGTCTCAGTTATTTTTCAAATTGGGAAAAAGAGGTGGG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACTGTTATGGTCTCAGTTATTTTTCAAATTGGGAAAAAGAGGTGGG  1088

seq1  TTAATTTGAATTC  1109
      |||||||||||||
seq2  TTAATTTGAATTC  1101