BAC Information

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BAC

Clone NameB6Ng01-122E14
Chromosome15 (Build37)
Map Location 21,145,582 - 21,254,036
singlet/doubletdoublet
Overlap geneCdh12
Upstream geneAcot10, LOC100040302
Downstream geneLOC100040351
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122E14.bB6Ng01-122E14.g
ACCDH925751DH925752
length1,172971
definitionDH925751|Mus musculus domesticus DNA, BAC clone: B6Ng01-122E14, 5' end.DH925752|Mus musculus domesticus DNA, BAC clone: B6Ng01-122E14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,252,858 - 21,254,036)(21,145,582 - 21,146,560)
sequence
gaattctttaataaataacaataaacaacaaaaagaatactttgtacgat
aaatcatagatgagaaacttagaaagtaaattatctctattgaaatacag
aattggccttgctgacacaaatcaggcaactttttgtatttctcttttca
taaaattgttacaaaactcatttagatgactctgtttgcattctgaaagt
atatcaatacagaagaatatgagttgaattttctaaaagataataatttc
ctcactgggtttcctctcttatccttaatacaatattatcaaaacatgcg
aaaacaaattacaatatgtctgagcttgagttatctgttcgattatctct
aataatgtgttttataaaaatgtaacttttagggataaatcgtgattttt
tttataatcgattattttgcaaaatgttgactgtgttaggaatcatatct
gtgttagtctaagaacacatctagaaactaagtttcattggtttatgaga
ctagagcctaaagtaataagaaatatatgtgatgaaggaacttagaagtc
cagatttctcataaagcacaattttttcaatgaatggttcacagtgtgca
catatattagaatctattattgagtaccctcagaaataaaatgagaatta
attcatagctcacaggtaatcagttagcctagttttgaatgttaggtgtt
gtgctttcaaacaaaacatatttaaggaacaatttaaataaaaatatggt
tttaaataagtgactggatgcttaaacatacatagtgttttaatgatttt
catgtagaagtatttatgggtgctaaggaatctgactgctagaatttgat
actacaaatttaaaaataattcctttctttaataatacatgcattctgaa
cattcattttcgatgatcaacaaataaaataaatagttatatgcaatagt
caatatttcatcttttggaagcatttctaaaattatttgaagttcagaat
tggaggtactcccctggattagttatgcaatcagttgttaccagttcttg
cattcatataagaacactcataagatgctatttatcatgtttgcatactt
aagcctctttaatgttcactggtgtatactttgtgggtttcatacaaacc
cagtaatgatgagggagtcact
gaattcaatcacttgaaaggtggaaagagagaagtcacttcaaaatgttg
tctttgtacctctacaaataaatcatgcatgcatgcagacaaaaatggta
gtactatcgatggtggtgatgataatgatgatgatagtgatgataatggt
gatgatggtgatcacgatatacttcatttaatctagtggattaaaataga
atttaagtgttataataaaacttcaagaatgaggtacttaatttcgtttt
gatatcttaaaatccacagtccaattgccaatatatttcagtgtgtaaca
agatacacagtaataaatgagcatgagagcagtagatcccatgttagacc
tcataggtctaaaagtttcaattgcattacagaaaataaataaaatctgt
tttggcaaacacatctttttttttttttttcagtgaacattccttattca
catgcattccacaaacactagctgcaatgttcacttactctctgaatgtt
ggagaatgtagtatgaccatttcaataattccaactactttttaaactaa
tctcatgtcaagacacttggcgtgatgatttaaagtgctgctagacattc
aggaaaactgatggaagcttgagctcactatctttagtgtatttttgtag
tcacaaattgtatatatttatagaataccataggagaacttaattcagtt
attcattgtgtaattttgtatcagtgtgctagccattatatacctgactc
atcattatatcttattgtcaggccttagttttttcgtcatttagacttat
gtgttgatggagacaatataccaatggaattggatcttcgagtggggctt
gtatttgagagttagtcatcccagtgctttctctgacttcctcctgttct
ttcctatcagggaacatccgtccactcccagtctgggagatcaagtcctt
agttctgaaatggtatagcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_21252858_21254036
seq2: B6Ng01-122E14.b_48_1219 (reverse)

seq1  AGTGACATCCTCATCATAACT-GGTTTGTATGAAACCCAC-AAGTATACA  48
      ||||||  ||||||||| ||| |||||||||||||||||| |||||||||
seq2  AGTGACTCCCTCATCATTACTGGGTTTGTATGAAACCCACAAAGTATACA  50

seq1  -CAGTGAACA-TAAAGA-GCTTAAGGTATGGCAAAACATGATAAAATAGC  95
       ||||||||| |||||| |||||| |||||   ||||||||| |||||||
seq2  CCAGTGAACATTAAAGAGGCTTAA-GTATG--CAAACATGAT-AAATAGC  96

seq1  AATTCTATGAGTTGTTCTTATAATGGAAATGCAAGAACTTGGTAACACTT  145
       ||  |||||| ||||||||| |||  ||||||||||| ||||||||  |
seq2  -ATCTTATGAG-TGTTCTTAT-ATG--AATGCAAGAAC-TGGTAACAACT  140

seq1  GATTGCATAACTAATTCCAGGTGAGTACCTCCAATTCTGAACTTCAAATA  195
      |||||||||||||| |||||| ||||||||||||||||||||||||||||
seq2  GATTGCATAACTAA-TCCAGGGGAGTACCTCCAATTCTGAACTTCAAATA  189

seq1  ATTTTTAGAAATGCTTCCAAAAGATGAAATATTGACTATTGCATATAACT  245
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-TTTTAGAAATGCTTCCAAAAGATGAAATATTGACTATTGCATATAACT  238

seq1  ATTTATTTTATTTGTTGATCATCG-AAATGAATGTTCAGAATGCATGTAT  294
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATTTATTTTATTTGTTGATCATCGAAAATGAATGTTCAGAATGCATGTAT  288

seq1  TATTAAAGAAAGGAATTATTTTTAAATTTGTAGTATCAAATTCTAGCAGT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAGAAAGGAATTATTTTTAAATTTGTAGTATCAAATTCTAGCAGT  338

seq1  CAGATTCCTTAGCACCCATAAATACCTTCTACATGAAAATCATTAAAACA  394
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CAGATTCCTTAGCACCCATAAATA-CTTCTACATGAAAATCATTAAAACA  387

seq1  CTATGTATGTTTAAGCATCCAGTCACTTATTTAAAACCATATTTTTATTT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTATGTTTAAGCATCCAGTCACTTATTTAAAACCATATTTTTATTT  437

seq1  AAATTGTTCCTTAAATATGTTTTGTTTGAAAGCACAACACCTAACATTCA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTTCCTTAAATATGTTTTGTTTGAAAGCACAACACCTAACATTCA  487

seq1  AAACTAGGCTAACTGATTACCTGTGAGCTATGAATTAATTCTCATTTTAT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAGGCTAACTGATTACCTGTGAGCTATGAATTAATTCTCATTTTAT  537

seq1  TTCTGAGGGTACTCAATAATAGATTCTAATATATGTGCACACTGTGAACC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGGGTACTCAATAATAGATTCTAATATATGTGCACACTGTGAACC  587

seq1  ATTCATTGAAAAAATTGTGCTTTATGAGAAATCTGGACTTCTAAGTTCCT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTGAAAAAATTGTGCTTTATGAGAAATCTGGACTTCTAAGTTCCT  637

seq1  TCATCACATATATTTCTTATTACTTTAGGCTCTAGTCTCATAAACCAATG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCACATATATTTCTTATTACTTTAGGCTCTAGTCTCATAAACCAATG  687

seq1  AAACTTAGTTTCTAGATGTGTTCTTAGACTAACACAGATATGATTCCTAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTAGTTTCTAGATGTGTTCTTAGACTAACACAGATATGATTCCTAA  737

seq1  CACAGTCAACATTTTGCAAAATAATCGATTATAAAAAAAATCACGATTTA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTCAACATTTTGCAAAATAATCGATTATAAAAAAAATCACGATTTA  787

seq1  TCCCTAAAAGTTACATTTTTATAAAACACATTATTAGAGATAATCGAACA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAAAAGTTACATTTTTATAAAACACATTATTAGAGATAATCGAACA  837

seq1  GATAACTCAAGCTCAGACATATTGTAATTTGTTTTCGCATGTTTTGATAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACTCAAGCTCAGACATATTGTAATTTGTTTTCGCATGTTTTGATAA  887

seq1  TATTGTATTAAGGATAAGAGAGGAAACCCAGTGAGGAAATTATTATCTTT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTATTAAGGATAAGAGAGGAAACCCAGTGAGGAAATTATTATCTTT  937

seq1  TAGAAAATTCAACTCATATTCTTCTGTATTGATATACTTTCAGAATGCAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAATTCAACTCATATTCTTCTGTATTGATATACTTTCAGAATGCAA  987

seq1  ACAGAGTCATCTAAATGAGTTTTGTAACAATTTTATGAAAAGAGAAATAC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTCATCTAAATGAGTTTTGTAACAATTTTATGAAAAGAGAAATAC  1037

seq1  AAAAAGTTGCCTGATTTGTGTCAGCAAGGCCAATTCTGTATTTCAATAGA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTTGCCTGATTTGTGTCAGCAAGGCCAATTCTGTATTTCAATAGA  1087

seq1  GATAATTTACTTTCTAAGTTTCTCATCTATGATTTATCGTACAAAGTATT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTTACTTTCTAAGTTTCTCATCTATGATTTATCGTACAAAGTATT  1137

seq1  CTTTTTGTTGTTTATTGTTATTTATTAAAGAATTC  1179
      |||||||||||||||||||||||||||||||||||
seq2  CTTTTTGTTGTTTATTGTTATTTATTAAAGAATTC  1172

seq1: chr15_21145582_21146560
seq2: B6Ng01-122E14.g_65_1035

seq1  GAATTCAATCACTTGAAAGGTGGAAAGAGAGAAGTCACTTCAAAATGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCACTTGAAAGGTGGAAAGAGAGAAGTCACTTCAAAATGTTG  50

seq1  TCTTTGTACCTCTACAAATAAATCATGCATGCATGCAGACAAAAATGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTACCTCTACAAATAAATCATGCATGCATGCAGACAAAAATGGTA  100

seq1  GTACTATCGATGGTGGTGATGATAATGATGATGATAGTGATGATAATGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTATCGATGGTGGTGATGATAATGATGATGATAGTGATGATAATGGT  150

seq1  GATGATGGTGATCACGATATACTTCATTTAATCTAGTGGATTAAAATAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATGGTGATCACGATATACTTCATTTAATCTAGTGGATTAAAATAGA  200

seq1  ATTTAAGTGTTATAATAAAACTTCAAGAATGAGGTACTTAATTTCGTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGTGTTATAATAAAACTTCAAGAATGAGGTACTTAATTTCGTTTT  250

seq1  GATATCTTAAAATCCACAGTCCAATTGCCAATATATTTCAGTGTGTAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCTTAAAATCCACAGTCCAATTGCCAATATATTTCAGTGTGTAACA  300

seq1  AGATACACAGTAATAAATGAGCATGAGAGCAGTAGATCCCATGTTAGACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACACAGTAATAAATGAGCATGAGAGCAGTAGATCCCATGTTAGACC  350

seq1  TCATAGGTCTAAAAGTTTCAATTGCATTACAGAAAATAAATAAAATCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGGTCTAAAAGTTTCAATTGCATTACAGAAAATAAATAAAATCTGT  400

seq1  TTTGGCAAACACATCTTTTTTTTTTTTTTTCAGTGAACATTCCTTATTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCAAACACATCTTTTTTTTTTTTTTTCAGTGAACATTCCTTATTCA  450

seq1  CATGCATTCCACAAACACTAGCTGCAATGTTCACTTACTCTCTGAATGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATTCCACAAACACTAGCTGCAATGTTCACTTACTCTCTGAATGTT  500

seq1  GGAGAATGTAGTATGACCATTTCAATAATTCCAACTACTTTTTAAACTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAATGTAGTATGACCATTTCAATAATTCCAACTACTTTTTAAACTAA  550

seq1  TCTCATGTCAAGACACTTGGCGTGATGATTTAAAGTGCTGCTAGACATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGTCAAGACACTTGGCGTGATGATTTAAAGTGCTGCTAGACATTC  600

seq1  AGGAAAACTGATGGAAGCTTGAGCTCAGCTATCTTTAGTGTA-TTTTGTA  649
      ||||||||||||||||||||||||||| |||||||||||||| |||||||
seq2  AGGAAAACTGATGGAAGCTTGAGCTCA-CTATCTTTAGTGTATTTTTGTA  649

seq1  GTCACAAATTGTATATATTTATAGAATACCATAGGAGAACTTAATTCAGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAAATTGTATATATTTATAGAATACCATAGGAGAACTTAATTCAGT  699

seq1  TATTCATTGTGTAATTTTTGTATCAGTGTGCTAGCCATTATATACCTGAC  749
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TATTCATTGTGTAA-TTTTGTATCAGTGTGCTAGCCATTATATACCTGAC  748

seq1  TCATCAATTATATCTTATTGTCAAGGCCTTAGTTTTTTCGTCATTTAGAC  799
      ||||| |||||||||||||||| |||||||||||||||||||||||||||
seq2  TCATC-ATTATATCTTATTGTC-AGGCCTTAGTTTTTTCGTCATTTAGAC  796

seq1  TTATGTGTTGATGTAGACAATATACCAATGGAATTGATTCTCCGAGT-GT  848
      ||||||||||||| ||||||||||||||||||||||  ||| ||||| | 
seq2  TTATGTGTTGATGGAGACAATATACCAATGGAATTGGATCTTCGAGTGGG  846

seq1  GCCTGTATTTGTGAGTTAGTCATCCCAGTGCTTTCTCTGTACTTCCTCCT  898
      || |||||||| ||||||||||||||||||||||||||| ||||||||||
seq2  GCTTGTATTTGAGAGTTAGTCATCCCAGTGCTTTCTCTG-ACTTCCTCCT  895

seq1  GTTCTTTCCTATCAAGTGAACATCAGTCCACTCCCAGTCTGTGAGATCAA  948
      ||||||||||||| || ||||||| |||||||||||||||| ||||||||
seq2  GTTCTTTCCTATC-AGGGAACATCCGTCCACTCCCAGTCTGGGAGATCAA  944

seq1  GTCCTTAAGTTTCTGAAAATGGTATAAGCCT  979
      |||||||   ||||| ||||||||| |||||
seq2  GTCCTTA--GTTCTG-AAATGGTAT-AGCCT  971