BAC Information

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BAC

Clone NameB6Ng01-124L16
Chromosome15 (Build37)
Map Location 65,728,001 - 65,823,600
singlet/doubletdoublet
Overlap geneOc90, F930104E18Rik, LOC100040835
Upstream geneAdcy8, LOC268812, LOC100040790, LOC665836, C920006C10Rik
Downstream geneKcnq3, Lrrc6, LOC100040860, Tmem71, LOC100040881, Phf20l1, Tg, Sla, Wisp1, Ndrg1, LOC100040667
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124L16.bB6Ng01-124L16.g
ACCDH927562DH927563
length1,135715
definitionDH927562|Mus musculus domesticus DNA, BAC clone: B6Ng01-124L16, 5' end.DH927563|Mus musculus domesticus DNA, BAC clone: B6Ng01-124L16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,728,001 - 65,729,134)(65,822,886 - 65,823,600)
sequence
gaattctatcccaggtggttcctgttagaccttctgtgtttgcattcctc
tgttttatgtaagaatccagtaacctctttgtaccttgcgggtatgtcac
tcaacttccttattgtcttctgtataaaaagtttgatgctcgatttgaca
aattacattcagattctatacaacctctcctgtgtgcatctgtctgtcat
tccatccgacgctttgcccagctgccccagagacccgttccacacaggca
aaggggcccagagggtctgcagcagacaactatagctacctcactacagt
cattgctactaccatccctactgtgactgcttctacaagcccagtcttgt
ttccatggttactgatactcttcaccacctcataactaggcacagtcaca
gtgcctcgttcagttagtatttaatcatgtaaaccaaaatagtgactccg
aagtaagcattacaattaccttcacttttaaaggtaaagaaaatagaata
taaacaagttaagtgactgggtaaggagcagagaaggagaattgctgagt
catgggtaacagggcttgaatttgaacacatagcaacagatttctcaagt
cagtcaatagctcagttggccctcctacttccatacttgttgaccacacc
cctgttaaaacttgcttaatgtttttaggtttcagttgtcattgcccatc
ttgctactttgttcaagggtgcagcttccttgtccatagggatggagcat
gtctttagtggctgtgcatatttttttgcattctatactaaaggcaggag
tagtgttttgattatctttagcacagcacacctgggtttgttgttgttta
tgttttattgaaggttggatagcaaccgccatagctgcttttttctctag
ttggcagaaatgcactggataaggcttccaggttcccctcatgtatcttg
tattgatagactgtataataggatcttatgctattaatatagggacccat
ttagacaaccctgcagatagtgtttccatgacagaggctcttggtgtatc
ccacctacaacaactatcgtagttatacgtcagtgtggaaagaatgagat
acagtttgccccttagttaggtaacagaattagat
gaattctttgaactggaatttgcattattttccaaacaagatctaagttt
atagtcttgcttccctggtgattcaaaatcagagtggcaggaattagttt
tgtgttgtttgccaagctggtatatgtctagtcagttgtctgtatcagcc
aaatgcaggacgaatactaagggccctaagagctgcttgtttgcatctaa
gaaacaaacagaagaaagataagataatctgaaatccttctattgaacta
tcctttttaaaaaagatgtctaaaccagccaaccaaatgtattcaactga
acatgtcaatacattgcatggtcgtcatggctggtgttctgatcctcagt
tgaaatgtcaatgtgagttctataacgatcctttgtaacacaaaagaatc
tcaggacagaataattcaagataatatgtatcggaaagcacatcagtagc
tctgcagcttgcctaggaagtcataacacttttaacagaaacccagaaag
actgagaaattaattccatcacaaaaaacaggaatggttttatcaggata
aaggatcgtcttatatgtatttggctgccatgttttaaaatatatttaaa
ctttacaatttttaagaaatgggaatgaaagtataattcagtggtagagt
acttgtataccatacattaaattctggctttgatccctagtattgcacga
cacattgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_65728001_65729134
seq2: B6Ng01-124L16.b_49_1183

seq1  GAATTCTATCCCAGGTGGTTCCTGTTAGACCTTCTGTGTTTGCATTCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCCCAGGTGGTTCCTGTTAGACCTTCTGTGTTTGCATTCCTC  50

seq1  TGTTTTATGTAAGAATCCAGTAACCTCTTTGTACCTTGCGGGTATGTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTATGTAAGAATCCAGTAACCTCTTTGTACCTTGCGGGTATGTCAC  100

seq1  TCAACTTCCTTATTGTCTTCTGTATAAAAAGTTTGATGCTCGATTTGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTTCCTTATTGTCTTCTGTATAAAAAGTTTGATGCTCGATTTGACA  150

seq1  AATTACATTCAGATTCTATACAACCTCTCCTGTGTGCATCTGTCTGTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACATTCAGATTCTATACAACCTCTCCTGTGTGCATCTGTCTGTCAT  200

seq1  TCCATCCGACGCTTTGCCCAGCTGCCCCAGAGACCCGTTCCACACAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCGACGCTTTGCCCAGCTGCCCCAGAGACCCGTTCCACACAGGCA  250

seq1  AAGGGGCCCAGAGGGTCTGCAGCAGACAACTATAGCTACCTCACTACAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGCCCAGAGGGTCTGCAGCAGACAACTATAGCTACCTCACTACAGT  300

seq1  CATTGCTACTACCATCCCTACTGTGACTGCTTCTACAAGCCCAGTCTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTACTACCATCCCTACTGTGACTGCTTCTACAAGCCCAGTCTTGT  350

seq1  TTCCATGGTTACTGATACTCTTCACCACCTCATAACTAGGCACAGTCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATGGTTACTGATACTCTTCACCACCTCATAACTAGGCACAGTCACA  400

seq1  GTGCCTCGTTCAGTTAGTATTTAATCATGTAAACCAAAATAGTGACTCCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTCGTTCAGTTAGTATTTAATCATGTAAACCAAAATAGTGACTCCG  450

seq1  AAGTAAGCATTACAATTACCTTCACTTTTAAAGGTAAAGAAAATAGAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGCATTACAATTACCTTCACTTTTAAAGGTAAAGAAAATAGAATA  500

seq1  TAAACAAGTTAAGTGACTGGGTAAGGAGCAGAGAAGGAGAATTGCTGAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAAGTTAAGTGACTGGGTAAGGAGCAGAGAAGGAGAATTGCTGAGT  550

seq1  CATGGGTAACAGGGCTTGAATTTGAACACATAGCAACAGATTTCTCAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGTAACAGGGCTTGAATTTGAACACATAGCAACAGATTTCTCAAGT  600

seq1  CAGTCAATAGCTCAGTTGGCCCTCCTACTTCCATACTTGTTGACCACACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAATAGCTCAGTTGGCCCTCCTACTTCCATACTTGTTGACCACACC  650

seq1  CCTGTTAAAACTTGCTTAATGTTTTTAGGTTTCAGTTGTCATTGCCCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTAAAACTTGCTTAATGTTTTTAGGTTTCAGTTGTCATTGCCCATC  700

seq1  TTGCTACTTTGTTCAAGGGTGCAGCTTCCTTGTCCATAGGGATGGAGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTACTTTGTTCAAGGGTGCAGCTTCCTTGTCCATAGGGATGGAGCAT  750

seq1  GTCTTTAGTGGCTGTGCATA-TTTTTTGCATTCTATACT-AAGGCAGGAG  798
      |||||||||||||||||||| |||||||||||||||||| ||||||||||
seq2  GTCTTTAGTGGCTGTGCATATTTTTTTGCATTCTATACTAAAGGCAGGAG  800

seq1  TAGTGTTTTGATTATCTTTAGCACAGCACACCTGGG-TTGTTGTTGTTTA  847
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TAGTGTTTTGATTATCTTTAGCACAGCACACCTGGGTTTGTTGTTGTTTA  850

seq1  TG-TTTATTGAAGGTTGGATAGCAACCGCCATAGCTGC-TTTTTCTCTAG  895
      || ||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGTTTTATTGAAGGTTGGATAGCAACCGCCATAGCTGCTTTTTTCTCTAG  900

seq1  TTGGCAGAAATGCACTGGATAAGGCTTCCAGGTTCCCCTCAATGTATCTT  945
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTGGCAGAAATGCACTGGATAAGGCTTCCAGGTTCCCCTC-ATGTATCTT  949

seq1  GTATTGATAGAACTGTTATAATAAGGATCTTATGCTATTAATATAGGGAA  995
      |||||||||| |||| |||||| |||||||||||||||||||||||||| 
seq2  GTATTGATAG-ACTG-TATAAT-AGGATCTTATGCTATTAATATAGGGA-  995

seq1  CCCCATTTTAGAACAACCCTGCAGTATAGTGTTTCCATGACAGAGGCTCT  1045
       |||| ||||| |||||||||||| |||||||||||||||||||||||||
seq2  -CCCA-TTTAG-ACAACCCTGCAG-ATAGTGTTTCCATGACAGAGGCTCT  1041

seq1  T-GTGTA-CCCACCTACAACAAC-ATCGTTAGTTATACTGCAGTGTGAAG  1092
      | ||||| ||||||||||||||| |||| |||||||||  ||||||| | 
seq2  TGGTGTATCCCACCTACAACAACTATCG-TAGTTATACGTCAGTGTGGAA  1090

seq1  AG-ATGAG-TACCAGTTGCCCTTTAG-TAGGTAACAGAATTAGAT  1134
      || ||||| |||   |||||| |||| ||||||||||||||||||
seq2  AGAATGAGATACAGTTTGCCCCTTAGTTAGGTAACAGAATTAGAT  1135

seq1: chr15_65822886_65823600
seq2: B6Ng01-124L16.g_68_782 (reverse)

seq1  CACACACACAATGTGTCGTGCAATACTAGGGATCAAAGCCAGAATTTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACAATGTGTCGTGCAATACTAGGGATCAAAGCCAGAATTTAAT  50

seq1  GTATGGTATACAAGTACTCTACCACTGAATTATACTTTCATTCCCATTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGTATACAAGTACTCTACCACTGAATTATACTTTCATTCCCATTTC  100

seq1  TTAAAAATTGTAAAGTTTAAATATATTTTAAAACATGGCAGCCAAATACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATTGTAAAGTTTAAATATATTTTAAAACATGGCAGCCAAATACA  150

seq1  TATAAGACGATCCTTTATCCTGATAAAACCATTCCTGTTTTTTGTGATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGACGATCCTTTATCCTGATAAAACCATTCCTGTTTTTTGTGATGG  200

seq1  AATTAATTTCTCAGTCTTTCTGGGTTTCTGTTAAAAGTGTTATGACTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATTTCTCAGTCTTTCTGGGTTTCTGTTAAAAGTGTTATGACTTCC  250

seq1  TAGGCAAGCTGCAGAGCTACTGATGTGCTTTCCGATACATATTATCTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAAGCTGCAGAGCTACTGATGTGCTTTCCGATACATATTATCTTGA  300

seq1  ATTATTCTGTCCTGAGATTCTTTTGTGTTACAAAGGATCGTTATAGAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCTGTCCTGAGATTCTTTTGTGTTACAAAGGATCGTTATAGAACT  350

seq1  CACATTGACATTTCAACTGAGGATCAGAACACCAGCCATGACGACCATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTGACATTTCAACTGAGGATCAGAACACCAGCCATGACGACCATGC  400

seq1  AATGTATTGACATGTTCAGTTGAATACATTTGGTTGGCTGGTTTAGACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATTGACATGTTCAGTTGAATACATTTGGTTGGCTGGTTTAGACAT  450

seq1  CTTTTTTAAAAAGGATAGTTCAATAGAAGGATTTCAGATTATCTTATCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTAAAAAGGATAGTTCAATAGAAGGATTTCAGATTATCTTATCTT  500

seq1  TCTTCTGTTTGTTTCTTAGATGCAAACAAGCAGCTCTTAGGGCCCTTAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGTTTGTTTCTTAGATGCAAACAAGCAGCTCTTAGGGCCCTTAGT  550

seq1  ATTCGTCCTGCATTTGGCTGATACAGACAACTGACTAGACATATACCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGTCCTGCATTTGGCTGATACAGACAACTGACTAGACATATACCAGC  600

seq1  TTGGCAAACAACACAAAACTAATTCCTGCCACTCTGATTTTGAATCACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAAACAACACAAAACTAATTCCTGCCACTCTGATTTTGAATCACCA  650

seq1  GGGAAGCAAGACTATAAACTTAGATCTTGTTTGGAAAATAATGCAAATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGCAAGACTATAAACTTAGATCTTGTTTGGAAAATAATGCAAATTC  700

seq1  CAGTTCAAAGAATTC  715
      |||||||||||||||
seq2  CAGTTCAAAGAATTC  715