BAC Information

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BAC

Clone NameB6Ng01-124L21
Chromosome15 (Build37)
Map Location 33,699,601 - 33,849,084
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040962, Sdc2, Pgcp, 1700084J12Rik, Tspyl5
Downstream geneLOC675463, Mtdh, Laptm4b, Matn2, Rpl30, BC030476, Hrsp12, Pop1, Npal2, Kcns2, Stk3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124L21.bB6Ng01-124L21.g
ACCDH927572DH927573
length692348
definitionDH927572|Mus musculus domesticus DNA, BAC clone: B6Ng01-124L21, 5' end.DH927573|Mus musculus domesticus DNA, BAC clone: B6Ng01-124L21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,699,601 - 33,700,232)(33,848,737 - 33,849,084)
sequence
gaattctttgtatattctggatattagtcctctattagatgtaggattgg
taaagattttttcctaatctgttggttgttctattgtcagggtcctttgc
cttacagaagctttttaattataacaggttccatttgtcaattgttgatc
ttagagtacaagccattggtgttttgttcaggggacttttcccagtgcca
atgtgttcaaggtttccttctattagatattagccaaaaaaaaaaaaaaa
aaaaaaggctcagaatacccaaaatacaactcagggatcatatatatgaa
acccaaaaagaagaaagaccaaagtgtggaaatgcttcagccctactcag
aagggggaagaaaatattcacaggatgtagaatgagcaagggaactggaa
aggagagaagaggtgagagaaaggggagcaggatcaggtgtgggaggagt
tggaagaagtacagaaggtcagaaaattaaactgatgtgtgtagcagtag
gggatgggggaactggacatagccactagaaagatccaccaaagtaccaa
gaaagatcccatggcttgtccttggcccatacaccagaggcactccctaa
ctacttcctagcaacagtcaatcaaaaaattagtctgattgtttttagat
gtaccttccacatcatatggtgattgttcatggttttgcttc
aattaccaccttccaaacattgagctaaatcttctccatttattatttac
tcattttcttaacagcaccaagagcttagtactgttatgttcctatttta
cagaagagtcagttgaggcaaagagtacagagttaatattatgttgctgg
gagtaggggcattctgataaccagtttatgatactggttataagaatgct
ttgagagggacccatggctccagccgcatatgtagcagagaacgaccttg
tatggcatcagtggggggagaggcccttggtcctgtgaaggcttgatgtc
ccagtgtaggagaatttgagggtagggaggctgaagtgggtgggtgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_33699601_33700232
seq2: B6Ng01-124L21.b_102_737

seq1  TTTTTTCCTAATCTGTTGGTTGTTCTATTGTCAGGGTCCTTTGCCTTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCCTAATCTGTTGGTTGTTCTATTGTCAGGGTCCTTTGCCTTACA  50

seq1  GAAGCTTTTTAATTATAACAGGTTCCATTTGTCAATTGTTGATCTTAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTTTTTAATTATAACAGGTTCCATTTGTCAATTGTTGATCTTAGAG  100

seq1  TACAAGCCATTGGTGTTTTGTTCAGGGGACTTTTCCCAGTGCCAATGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGCCATTGGTGTTTTGTTCAGGGGACTTTTCCCAGTGCCAATGTGT  150

seq1  TCAAGGTTTCCTTCTATTAGATATTAGCCAAAAAAAAAAAAAAAAAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGTTTCCTTCTATTAGATATTAGCCAAAAAAAAAAAAAAAAAAAAA  200

seq1  GGCTCAGAATACCCAAAATACAACTCAGGGATCATATATATGAAACCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAGAATACCCAAAATACAACTCAGGGATCATATATATGAAACCCAA  250

seq1  AAAGAAGAAAGACCAAAGTGTGGAAATGCTTCAGCCCTACTCAGAAGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGAAAGACCAAAGTGTGGAAATGCTTCAGCCCTACTCAGAAGGGG  300

seq1  GAAGAAAATATTCACAGGATGTAGAATGAGCAAGGGAACTGGAAAGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAATATTCACAGGATGTAGAATGAGCAAGGGAACTGGAAAGGAGA  350

seq1  GAAGAGGTGAGAGAAAGGGGAGCAGGATCAGGTGTGGGAGGAGTTGGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGTGAGAGAAAGGGGAGCAGGATCAGGTGTGGGAGGAGTTGGAAG  400

seq1  AAGTACAGAAGGTCAGAAAATTAAACTGATGTGTGTAGCAGTAGGGGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACAGAAGGTCAGAAAATTAAACTGATGTGTGTAGCAGTAGGGGATG  450

seq1  GGGGAACTGGACATAGCCACTAGAAAGATCCACCAAAGTACCAAGAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAACTGGACATAGCCACTAGAAAGATCCACCAAAGTACCAAGAAAGA  500

seq1  TCCCATGGCTTGTCCTTGGCCCATACACCAGAGGCACTCCCTAACTACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATGGCTTGTCCTTGGCCCATACACCAGAGGCACTCCCTAACTACTT  550

seq1  CCTAGCAACAGTCAATC-AAAGATTAGTCTGATTG-TTTTAGATGTACCT  598
      ||||||||||||||||| ||| ||||||||||||| ||||||||||||||
seq2  CCTAGCAACAGTCAATCAAAAAATTAGTCTGATTGTTTTTAGATGTACCT  600

seq1  T-CACATCATAT-GTGATTGTTCATGGTTTTGCTTC  632
      | |||||||||| |||||||||||||||||||||||
seq2  TCCACATCATATGGTGATTGTTCATGGTTTTGCTTC  636

seq1: chr15_33848737_33849084
seq2: B6Ng01-124L21.g_74_421 (reverse)

seq1  TCCACCCACCCACTTCAGCCTCCCTACCCTCAAATTCTCCTACACTGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCCACCCACTTCAGCCTCCCTACCCTCAAATTCTCCTACACTGGGA  50

seq1  CATCAAGCCTTCACAGGACCAAGGGCCTCTCCCCCCACTGATGCCATACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAGCCTTCACAGGACCAAGGGCCTCTCCCCCCACTGATGCCATACA  100

seq1  AGGTCGTTCTCTGCTACATATGCGGCTGGAGCCATGGGTCCCTCTCAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCGTTCTCTGCTACATATGCGGCTGGAGCCATGGGTCCCTCTCAAAG  150

seq1  CATTCTTATAACCAGTATCATAAACTGGTTATCAGAATGCCCCTACTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTATAACCAGTATCATAAACTGGTTATCAGAATGCCCCTACTCCC  200

seq1  AGCAACATAATATTAACTCTGTACTCTTTGCCTCAACTGACTCTTCTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACATAATATTAACTCTGTACTCTTTGCCTCAACTGACTCTTCTGTA  250

seq1  AAATAGGAACATAACAGTACTAAGCTCTTGGTGCTGTTAAGAAAATGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGGAACATAACAGTACTAAGCTCTTGGTGCTGTTAAGAAAATGAGT  300

seq1  AAATAATAAATGGAGAAGATTTAGCTCAATGTTTGGAAGGTGGTAATT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATAAATGGAGAAGATTTAGCTCAATGTTTGGAAGGTGGTAATT  348