BAC Information

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BAC

Clone NameB6Ng01-124O24
Chromosome15 (Build37)
Map Location 57,886,105 - 58,034,242
singlet/doubletdoublet
Overlap geneZhx1, Atad2, LOC665244, 2410187C16Rik, Fbxo32
Upstream geneBC026439, Zhx2, Derl1, Wdr67, BC030396, 9130401M01Rik
Downstream gene8230402K04Rik, Anxa13, LOC100040231, D15Ertd621e, EG631797, Tmem65, EG546638, Trmt12, Rnf139, Tatdn1, Ndufb9, Mtss1, LOC100040330
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124O24.bB6Ng01-124O24.g
ACCDH927712DH927713
length4161,140
definitionDH927712|Mus musculus domesticus DNA, BAC clone: B6Ng01-124O24, 5' end.DH927713|Mus musculus domesticus DNA, BAC clone: B6Ng01-124O24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,033,860 - 58,034,242)(57,886,105 - 57,887,244)
sequence
agtcccctggactcatatgggggaaggggacactgaccccacgagctgtc
ccttgatctccatatgtgcattgtggtacgcatgcaccatgtgagtttgc
acgcacacacaaacacacactaattaaatgagattttttaaatttttttt
tttaatgaaatgagagagaccctgcctcaaagcaagatggaaggttgtgc
tttccatacacttgctgtgacatgcacacacacacatactcaacatacac
attacatatacaaaagaaaaataagtattgttaaaacaatatttaacaat
aaaactatatatgtgtgtgtgtatatatatgtatatatatatatatatat
atatatatatatatatacacatatatatatatatatatatatatatatat
atttatatatatatat
gaattcagcacaacattgggatgttctgaatctacatggaaagtaaacat
atttagatctggagtttgaaaagtacaatatttacattcatagccccctt
ccactttcttattttgctgattgtcagaatccacagatccgtgaacttct
tcatcgctggagacactctctgctttagcattctctacaggtgtaaggat
gggagggccttcatccaaatccgatatcagctcaagatctggatcctgct
cactggcaaggaccatgcaaggtgttgttgattttcgtctgcttgccatt
ttgattttaggggcagggatgagggggaatctcagtggtgatttaaaagc
actgaggcttaaaactgtttggaatccttcatttgaaaacagtggcttct
agctcttcaagtccacttttgtgctcaacaagtctcattagtagcgtttc
catggtgcactcaagtaaaaagcttagttggcagataaaacactgctgaa
ctgctgaaatgtatgaagcacaactccaatcacctacattggaataaatt
taaaatgcatgactatgatttttaatccatttatgttattataatttact
tatgttaagctgtagcataggtcagttatacagatatatactctgaatca
ggaactctaagattttaaatagatttctatctctaagccaacacattgac
gaccatatgatacttagggtcagctccacgtgtgttgatttagatctttt
agttagctagatagtagaaaggagcctgctatggcaagcacactcttacc
agtctaaagtaacaacaacctgttaacagtgaccagtgacaagtaaacaa
agttcaacccatcaactaagtcttcttccttctctgctgtctgggctcaa
atgctgaaagaatagagttgaagcctccgtagacattatgcagttccctt
cactctctggacccaacctcatttttctacttcatctccttgggtcgtcc
tcctccaccttccatagctgtcattccagggataccttgaatacttataa
agttatctcaggcttgtccttggatatcagggcacatttgccagatggaa
aaatatctttcgcatataaagtacctctcccaccttattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_58033860_58034242
seq2: B6Ng01-124O24.b_43_415 (reverse)

seq1  TATATATATTTCATCATGTATATATATATATATATATATATATATACATA  50
      ||||||||          ||||||||||||||||||||||||||||||||
seq2  TATATATA----------TATATATATATATATATATATATATATACATA  40

seq1  TATATACACACACACATATATAGTTTTATTGTTAAATATTGTTTTAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACACACACACATATATAGTTTTATTGTTAAATATTGTTTTAACAA  90

seq1  TACTTATTTTTCTTTTGTATATGTAATGTGTATGTTGAGTATGTGTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTATTTTTCTTTTGTATATGTAATGTGTATGTTGAGTATGTGTGTGT  140

seq1  GTGCATGTCACAGCAAGTGTATGGAAAGCACAACCTTCCATCTTGCTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGTCACAGCAAGTGTATGGAAAGCACAACCTTCCATCTTGCTTTG  190

seq1  AGGCAGGGTCTCTCTCATTTCATTAAAAAAAAAAATTTAAAAAATCTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGGTCTCTCTCATTTCATTAAAAAAAAAAATTTAAAAAATCTCAT  240

seq1  TTAATTAGTGTGTGTTTGTGTGTGCGTGCAAACTCACATGGTGCATGCGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTAGTGTGTGTTTGTGTGTGCGTGCAAACTCACATGGTGCATGCGT  290

seq1  ACCACAATGCACATATGGAGATCAAGGGACAGCTCGTGGGGTCAGTGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAATGCACATATGGAGATCAAGGGACAGCTCGTGGGGTCAGTGTCC  340

seq1  CCTTCCCCCATATGAGTCCAGGGGACTGAATTC  383
      |||||||||||||||||||||||||||||||||
seq2  CCTTCCCCCATATGAGTCCAGGGGACTGAATTC  373

seq1: chr15_57886105_57887244
seq2: B6Ng01-124O24.g_67_1206

seq1  GAATTCAGCACAACATTGGGATGTTCTGAATCTACATGGAAAGTAAACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCACAACATTGGGATGTTCTGAATCTACATGGAAAGTAAACAT  50

seq1  ATTTAGATCTGGAGTTTGAAAAGTACAATATTTACATTCATAGCCCCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGATCTGGAGTTTGAAAAGTACAATATTTACATTCATAGCCCCCTT  100

seq1  CCACTTTCTTATTTTGCTGATTGTCAGAATCCACAGATCCGTGAACTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTTCTTATTTTGCTGATTGTCAGAATCCACAGATCCGTGAACTTCT  150

seq1  TCATCGCTGGAGACACTCTCTGCTTTAGCATTCTCTACAGGTGTAAGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCGCTGGAGACACTCTCTGCTTTAGCATTCTCTACAGGTGTAAGGAT  200

seq1  GGGAGGGCCTTCATCCAAATCCGATATCAGCTCAAGATCTGGATCCTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGCCTTCATCCAAATCCGATATCAGCTCAAGATCTGGATCCTGCT  250

seq1  CACTGGCAAGGACCATGCAAGGTGTTGTTGATTTTCGTCTGCTTGCCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGCAAGGACCATGCAAGGTGTTGTTGATTTTCGTCTGCTTGCCATT  300

seq1  TTGATTTTAGGGGCAGGGATGAGGGGGAATCTCAGTGGTGATTTAAAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTAGGGGCAGGGATGAGGGGGAATCTCAGTGGTGATTTAAAAGC  350

seq1  ACTGAGGCTTAAAACTGTTTGGAATCCTTCATTTGAAAACAGTGGCTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGGCTTAAAACTGTTTGGAATCCTTCATTTGAAAACAGTGGCTTCT  400

seq1  AGCTCTTCAAGTCCACTTTTGTGCTCAACAAGTCTCATTAGTAGCGTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTCAAGTCCACTTTTGTGCTCAACAAGTCTCATTAGTAGCGTTTC  450

seq1  CATGGTGCACTCAAGTAAAAAGCTTAGTTGGCAGATAAAACACTGCTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTGCACTCAAGTAAAAAGCTTAGTTGGCAGATAAAACACTGCTGAA  500

seq1  CTGCTGAAATGTATGAAGCACAACTCCAATCACCTACATTGGAATAAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGAAATGTATGAAGCACAACTCCAATCACCTACATTGGAATAAATT  550

seq1  TAAAATGCATGACTATGATTTTTAATCCATTTATGTTATTATAATTTACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGCATGACTATGATTTTTAATCCATTTATGTTATTATAATTTACT  600

seq1  TATGTTAAGCTGTAGCATAGGTCAGTTATACAGATATATACTCTGAATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTAAGCTGTAGCATAGGTCAGTTATACAGATATATACTCTGAATCA  650

seq1  GGAACTCTAAGATTTTAAATAGATTTCTATCTCTAAGCCAACACATTGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTCTAAGATTTTAAATAGATTTCTATCTCTAAGCCAACACATTGAC  700

seq1  GACCATATGATACTTAGGGTCAGCTCCACGTGTGTTGATTTAGATCTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATATGATACTTAGGGTCAGCTCCACGTGTGTTGATTTAGATCTTTT  750

seq1  AGTTAGCTAGATAGTAGAAAGGAGCCTGCTATGGCAAGCACACTCTTACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGCTAGATAGTAGAAAGGAGCCTGCTATGGCAAGCACACTCTTACC  800

seq1  AGTCTAAAGTAACAACAACCTGTTAACAGTGACCAGTGACAAGTAAACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAAAGTAACAACAACCTGTTAACAGTGACCAGTGACAAGTAAACAA  850

seq1  AGTTCAACCCATCAACTAAGTCTTCTTCCTTCTCTGCTGTCTGGGCTCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAACCCATCAACTAAGTCTTCTTCCTTCTCTGCTGTCTGGGCTCAA  900

seq1  ATGCTGAAAGAATAGAGTTGAAG-CTCCGTAAGACA-TATGCAGTTCCCT  948
      ||||||||||||||||||||||| |||||| ||||| |||||||||||||
seq2  ATGCTGAAAGAATAGAGTTGAAGCCTCCGT-AGACATTATGCAGTTCCCT  949

seq1  TCACTCTCTGGCCCCAACCTCATTTTTCTACTTCATCTCTTGGTGTCTTC  998
      ||||||||||| ||||||||||||||||||||||||||| | | ||| ||
seq2  TCACTCTCTGGACCCAACCTCATTTTTCTACTTCATCTCCTTGGGTCGTC  999

seq1  CTCCTCCTCCTTCCTATATCCTGTCATTCCAGGGATA-CTTGATACACTT  1047
      ||||||| |||||| |||  ||||||||||||||||| ||||| | ||||
seq2  CTCCTCCACCTTCC-ATA-GCTGTCATTCCAGGGATACCTTGA-ATACTT  1046

seq1  ATAAAGTTTATCTCAGGCTGCTC--TTGATTCCAGG--TCATTTGTACAG  1093
      |||||| ||||||||||||  ||  | |||  ||||   ||||||  |||
seq2  ATAAAG-TTATCTCAGGCTTGTCCTTGGATATCAGGGCACATTTG-CCAG  1094

seq1  TTGATAAAATATCTTTCTGCATTATAAGTCACCTCTCCTA-CTTATTT  1140
       ||  |||||||||||| ||| |||||   |||||||| | |||||||
seq2  ATGGAAAAATATCTTTC-GCA-TATAAAGTACCTCTCCCACCTTATTT  1140