BAC Information

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BAC

Clone NameB6Ng01-126M16
Chromosome15 (Build37)
Map Location 23,788,076 - 23,789,204
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh18, LOC624863
Downstream geneLOC666989, LOC666999, LOC100040492, LOC100040499
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126M16.bB6Ng01-126M16.g
ACCDH929070DH929071
length1,122933
definitionDH929070|Mus musculus domesticus DNA, BAC clone: B6Ng01-126M16, 5' end.DH929071|Mus musculus domesticus DNA, BAC clone: B6Ng01-126M16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctaccagatcagaagctcactatttgcctgtctgaggagtga
gatccagggatcttggtctccacctctgactctctaggaaaatcacaggc
aggtactgcccaatctgatttttacatgtgtgctagggactaaactcacg
tcttcacactacaacacattgagcacttttttttttttttttgacaattt
ccagaaagtgactctccaacaaacccagaaattcccatttcacaaagata
actctccagacaagttgagggtttttgtaaaaacagaaagacaactatct
tttcctccacagacgatgatcccaaaattcagtcatgaatacgatcctat
atttaagcaagaattacttttgctgattttattgtgatttttcagcaccc
cgatacattgaagaaactctgaagtgattttcaggtataattccaatcca
tttatcatctgcagatgaatcaaggtgtgcatgatatgctgtccatccag
aggatggggatgatctcagagcactgagtcttggctgagtctctagcaaa
taatgcgagtgtttgcttttgtgttttgatgaactgtttattagaataga
aattatacaacatatagatcagaaaaaaattcaagagcatttgtcatgga
tcattagcccatgagtatttttaccatttcactgattaaacaatctcaat
ttcctctgaaaataacttttgttcaggagaattaattttagcagaaatct
cgaaacaatcataattggtttcaagaagggaaggattgaagaaaattcta
gaattatttagagacttgacattctaagaataatgaattattttcttctt
caagcatcatatgcatcctggtaataaatgatcgcttcaatgtcccaact
ggggcatcttaggatctcttcaaattcatggattttttctatttagtgct
catatttttgttattctagacatatcatatgcactctatatacattttac
ttggtttccatagtatttatttttctaggagaaagacaataagagtatag
cactctgagaactgtcctactttttttcttggcttttatggtccatttct
atcaatttacatatcgtttatt

gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaacacccatggaaagagttacagagacggagtttggagctgagatgaa
aggatggaccatgtagagactgccatagtcagggatccacccctataatc
agcatccatacgctgacaccatgcatacactagcagattttattgaagga
cccagatgtagctgtctctgtgagacaatgccgggtcctacaaacacgaa
gtggatgctcccagtcagcttatggatggatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_23788076_23789204
seq2: B6Ng01-126M16.b_48_1169 (reverse)

seq1  AATAAAAAGAATATGGTAAATATGATAGAAAATGGACTCATAAAAGCCAA  50
      |||  |||  |||| |||||| |||||| |||||||| ||||||||||||
seq2  AAT--AAACGATAT-GTAAAT-TGATAG-AAATGGAC-CATAAAAGCCAA  44

seq1  GAAAAAAAAGTAGGACAG-TCTCAGAGTGCTATACTCTTTATTGTCTTTC  99
      | |||||||||||||||| |||||||||||||||||| ||||||||||||
seq2  G-AAAAAAAGTAGGACAGTTCTCAGAGTGCTATACTC-TTATTGTCTTTC  92

seq1  TCCTAGAAAAATAAATACTATGGAAACCAAGTAAAATGTATATAGAGTGC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGAAAAATAAATACTATGGAAACCAAGTAAAATGTATATAGAGTGC  142

seq1  ATATGATATGTCTTAGAATAACAAAAATATGAGCACTAAATAG-AAAAAT  198
      |||||||||||| |||||||||||||||||||||||||||||| ||||||
seq2  ATATGATATGTC-TAGAATAACAAAAATATGAGCACTAAATAGAAAAAAT  191

seq1  CCATGAATTTGAAGAGATCCTAAGATGCCCCAGTTGGGACATTGAAGCGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAATTTGAAGAGATCCTAAGATGCCCCAGTTGGGACATTGAAGCGA  241

seq1  TCATTTATTACCAGGATGCATATGATGCTTGAAGAAGAAAATAATTCATT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTATTACCAGGATGCATATGATGCTTGAAGAAGAAAATAATTCATT  291

seq1  ATTCTTAGAATGTCAAGTCTCTAAATAATTCTAGAATTTTCTTCAATCCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTAGAATGTCAAGTCTCTAAATAATTCTAGAATTTTCTTCAATCCT  341

seq1  TCCCTTCTTGAAACCAATTATGATTGTTTCGAGATTTCTGCTAAAATTAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCTTGAAACCAATTATGATTGTTTCGAGATTTCTGCTAAAATTAA  391

seq1  TTCTCCTGAACAAAAGTTATTTTCAGAGGAAATTGAGATTGTTTAATCAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTGAACAAAAGTTATTTTCAGAGGAAATTGAGATTGTTTAATCAG  441

seq1  TGAAATGGTAAAAATACTCATGGGCTAATGATCCATGACAAATGCTCTTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGGTAAAAATACTCATGGGCTAATGATCCATGACAAATGCTCTTG  491

seq1  AATTTTTTTCTGATCTATATGTTGTATAATTTCTATTCTAATAAACAGTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTTCTGATCTATATGTTGTATAATTTCTATTCTAATAAACAGTT  541

seq1  CATCAAAACACAAAAGCAAACACTCGCATTATTTGCTAGAGACTCAGCCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAAACACAAAAGCAAACACTCGCATTATTTGCTAGAGACTCAGCCA  591

seq1  AGACTCAGTGCTCTGAGATCATCCCCATCCTCTGGATGGACAGCATATCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCAGTGCTCTGAGATCATCCCCATCCTCTGGATGGACAGCATATCA  641

seq1  TGCACACCTTGATTCATCTGCAGATGATAAATGGATTGGAATTATACCTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACCTTGATTCATCTGCAGATGATAAATGGATTGGAATTATACCTG  691

seq1  AAAATCACTTCAGAGTTTCTTCAATGTATCGGGGTGCTGAAAAATCACAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCACTTCAGAGTTTCTTCAATGTATCGGGGTGCTGAAAAATCACAA  741

seq1  TAAAATCAGCAAAAGTAATTCTTGCTTAAATATAGGATCGTATTCATGAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCAGCAAAAGTAATTCTTGCTTAAATATAGGATCGTATTCATGAC  791

seq1  TGAATTTTGGGATCATCGTCTGTGGAGGAAAAGATAGTTGTCTTTCTGTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTTGGGATCATCGTCTGTGGAGGAAAAGATAGTTGTCTTTCTGTT  841

seq1  TTTACAAAAACCCTCAACTTGTCTGGAGAGTTATCTTTGTGAAATGGGAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAAAACCCTCAACTTGTCTGGAGAGTTATCTTTGTGAAATGGGAA  891

seq1  TTTCTGGGTTTGTTGGAGAGTCACTTTCTGGAAATTGTCAAAAAAAAAAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGGTTTGTTGGAGAGTCACTTTCTGGAAATTGTCAAAAAAAAAAA  941

seq1  AAAAAGTGCTCAATGTGTTGTAGTGTGAAGACGTGAGTTTAGTCCCTAGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTGCTCAATGTGTTGTAGTGTGAAGACGTGAGTTTAGTCCCTAGC  991

seq1  ACACATGTAAAAATCAGATTGGGCAGTACCTGCCTGTGATTTTCCTAGAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGTAAAAATCAGATTGGGCAGTACCTGCCTGTGATTTTCCTAGAG  1041

seq1  AGTCAGAGGTGGAGACCAAGATCCCTGGATCTCACTCCTCAGACAGGCAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGAGGTGGAGACCAAGATCCCTGGATCTCACTCCTCAGACAGGCAA  1091

seq1  ATAGTGAGCTTCTGATCTGGTAGGAGAATTC  1129
      |||||||||||||||||||||||||||||||
seq2  ATAGTGAGCTTCTGATCTGGTAGGAGAATTC  1122


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