BAC Information

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BAC

Clone NameB6Ng01-127C02
ChromosomeX (Build37)15 (Build37)
Map Location 101,538,595 - 101,538,79782,744,871 - 82,745,514
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneChic1, Tsx, Tsix, Xist, Rps12-ps1, LOC668406, LOC676246, ENSMUSG00000043661, LOC668412, LOC668415, B230206F22Rik, Cnbp2, LOC100042640, Slc16a2, EG621381, EG668426, LOC668430, Rnf12, C77370
Downstream geneVcp-ps, EG621542, Uprt, Zdhhc15, Magee2, LOC622098, LOC676331, 5530601H04Rik, 2610029G23Rik, Magee1, LOC622159, LOC668454, E530001F21Rik, LOC622202
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127C02.bB6Ng01-127C02.g
ACCDH929329DH929330
length907644
definitionDH929329|Mus musculus domesticus DNA, BAC clone: B6Ng01-127C02, 5' end.DH929330|Mus musculus domesticus DNA, BAC clone: B6Ng01-127C02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(101,538,595 - 101,538,797)(82,744,871 - 82,745,514)
sequence
gaattctaagtctcagatatggtctcagttctagatttgcatctgagacc
ggtcttcaatccgtgcactcaggaggcaggataaggaaactgaggaagaa
aggttatgagttcaaggccagcctaggcatgtgtcttagtgtttctattg
ctgtgatgaaacatcataaccaaaaaaagaaagtaagttgggtaggaaaa
ggatttggcttacagttctggatcatagtctgtcattggaggaagtcagg
actggaactcaagcagggctagaacctggaggcagaagctgatgcagagg
ccatgggggtggggttactgcctactggatagttcatcatggcttgctca
gcctgctttcctatagaacccagaaccaccagccaccatgagctgggccc
tcccccattgatcactaattgagaaaatgccttacagctgggtgtcatgg
aggcacttcctcaactgaggctccttcctttctgatgacttgtgtcaagt
tgacacaaaaccaaccagtacaactgatcccttgtcaacttgacacacaa
acacatcactattaagccacaacctttcttttcttattcatccccaagat
cccacattagaaaacataaataacttttaaaaagtcccacagtctttgca
agttaaaacacattaagatttcagtatctttttttttttttggtttttcg
agatagggtttctctgtatagccctggctgtcctggaactcactttgtag
accaggctggccttgaactcagaaatcttgcctgcctttgcctcctgagt
gctgggattaaaggcgtgcgccaccatgcccggcagaattcagttctttc
aaaaaatccaatcctctcccaaaatcaagaatctcttttttaaaatttca
aaggctt
gaattctaattcaacttggcaggcacctacattagactgtctggctttaa
accttggcttttctacttccttcctgtgagatctaaggcaagtgttactt
catttctctctgccacacaggctccacctgtaaaatgggaggaagaccag
agcttcccttttaaggtttcaagatggcatgagataagggatgcaaaata
ctcagaagggtgcaggcttagctggagccagatcaaggttagctgcctta
gtgactatctgatcagggccaagaaggcacgtctacatcggggcagtgga
aagggcgtggtcaccagaggaacagactggcctcccacagaactgtacca
ccccttgctttccctttgctgaagctgggtagccttctgctttcctgaga
ctctgatttctgataagaaatataaacaaaatgtctatagacacatggct
agcactaagtagatgtgcaataaacgcagagtccctgtagtctccaaagc
gtggagaagtacaattcataactcctccagcactcagcatgcgtgaggtc
acaagcataagcagaagcacagagaagggacttagaagggagaaagatgg
actgaacacaaggaaaggcttctggaaagtggggggaggggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_101538595_101538797
seq2: B6Ng01-127C02.b_727_955

seq1  TTTTTTTTTTTTTGGTTTTTCGAGGCAGGGTTTCTCTGTATAGCTTTGGC  50
      ||||||||||||||||||||||||  ||||||||||||||||||  ||||
seq2  TTTTTTTTTTTTTGGTTTTTCGAGATAGGGTTTCTCTGTATAGCCCTGGC  50

seq1  TGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATC-  99
      ||||||||||||||||||||||||||||||||||| ||||||||||||| 
seq2  TGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAAATCT  100

seq1  CACCTGCCTCTGCCTCCCAAGTGCTGGGATCAAAGGCGTGCGCCACCACG  149
        ||||||| |||||||  ||||||||||| ||||||||||||||||| |
seq2  TGCCTGCCTTTGCCTCCTGAGTGCTGGGATTAAAGGCGTGCGCCACCATG  150

seq1  CCCGGCGAAAT--AG-TCTTATATAACATC--------------------  176
      ||||||  |||  || ||||  | || |||                    
seq2  CCCGGCAGAATTCAGTTCTTTCAAAAAATCCAATCCTCTCCCAAAATCAA  200

seq1  --TTGCCTACTATAAAATTTCAAAGGCTT  203
         |  ||  | |||||||||||||||||
seq2  GAATCTCTTTTTTAAAATTTCAAAGGCTT  229

seq1: chr15_82744871_82745514
seq2: B6Ng01-127C02.g_69_712

seq1  GAATTCTAATTCAACTTGGCAGGCACCTACATTAGACTGTCTGGCTTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATTCAACTTGGCAGGCACCTACATTAGACTGTCTGGCTTTAA  50

seq1  ACCTTGGCTTTTCTACTTCCTTCCTGTGAGATCTAAGGCAAGTGTTACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGGCTTTTCTACTTCCTTCCTGTGAGATCTAAGGCAAGTGTTACTT  100

seq1  CATTTCTCTCTGCCACACAGGCTCCACCTGTAAAATGGGAGGAAGACCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTCTCTGCCACACAGGCTCCACCTGTAAAATGGGAGGAAGACCAG  150

seq1  AGCTTCCCTTTTAAGGTTTCAAGATGGCATGAGATAAGGGATGCAAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCCTTTTAAGGTTTCAAGATGGCATGAGATAAGGGATGCAAAATA  200

seq1  CTCAGAAGGGTGCAGGCTTAGCTGGAGCCAGATCAAGGTTAGCTGCCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAGGGTGCAGGCTTAGCTGGAGCCAGATCAAGGTTAGCTGCCTTA  250

seq1  GTGACTATCTGATCAGGGCCAAGAAGGCACGTCTACATCGGGGCAGTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTATCTGATCAGGGCCAAGAAGGCACGTCTACATCGGGGCAGTGGA  300

seq1  AAGGGCGTGGTCACCAGAGGAACAGACTGGCCTCCCACAGAACTGTACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCGTGGTCACCAGAGGAACAGACTGGCCTCCCACAGAACTGTACCA  350

seq1  CCCCTTGCTTTCCCTTTGCTGAAGCTGGGTAGCCTTCTGCTTTCCTGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTGCTTTCCCTTTGCTGAAGCTGGGTAGCCTTCTGCTTTCCTGAGA  400

seq1  CTCTGATTTCTGATAAGAAATATAAACAAAATGTCTATAGACACATGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATTTCTGATAAGAAATATAAACAAAATGTCTATAGACACATGGCT  450

seq1  AGCACTAAGTAGATGTGCAATAAACGCAGAGTCCCTGTAGTCTCCAAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTAAGTAGATGTGCAATAAACGCAGAGTCCCTGTAGTCTCCAAAGC  500

seq1  GTGGAGAAGTACAATTCATAACTCCTCCAGCACTCAGCATGCGTGAGGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGAAGTACAATTCATAACTCCTCCAGCACTCAGCATGCGTGAGGTC  550

seq1  ACAAGCATAAGCAGAAGCACAGAGAAGGGACTTAGAAGGGAGAAAGATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCATAAGCAGAAGCACAGAGAAGGGACTTAGAAGGGAGAAAGATGG  600

seq1  ACTGAACACAAGGAAAGGCTTCTGGAAAGTGGGGGGAGGGGAGG  644
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAACACAAGGAAAGGCTTCTGGAAAGTGGGGGGAGGGGAGG  644