BAC Information

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BAC

Clone NameB6Ng01-127C16
Chromosome15 (Build37)
Map Location 20,885,774 - 20,886,795
singlet/doubletsinglet
Overlap genenone
Upstream geneAcot10, LOC100040302
Downstream geneCdh12, LOC100040351
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127C16.bB6Ng01-127C16.g
ACCDH929355DH929356
length1,1771,023
definitionDH929355|Mus musculus domesticus DNA, BAC clone: B6Ng01-127C16, 5' end.DH929356|Mus musculus domesticus DNA, BAC clone: B6Ng01-127C16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacccgaggaataccgaatggctgagaagcacctgaaaaaaat
gttcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgaggatgtggagaaagaggaacactcctccattattggt
gggattgcaagtttgtacaaccactctggaaatcagtctggaggttcttc
agaaaattggacatattaatactggaggattccacaacacctctcctggg
catatatccagaagatgtcccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataaaagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacaaaaaaaaatgtggtacatttacac
aatggagtactactcagctattaaaaagtgaatttgtgaaattcctaggc
aaatggttggacctgaagggcatcatcctgagtgaggtaacacaatcaca
aaagaactcaaatgatatgtactcactgataagtggatattagcccagaa
acttagtatagtgagaaatcaggtacaatttgcaaaacacatgaaactga
agaagaacgaagaccaaagtgtggaaactttgccccttcttagaattgga
aacaatcacccatggaaggagttacagagacaaagtttggaactgagaca
aaaggatggaccatctagagactgccatatccagggatccatcccataat
tagcctccaaacgatgacaccattgcatacactagcaagcgtttgttgca
aggactgtgatatagctgtctcttgtgagactaggctggggcctagcaaa
cacagaagtggatgctcacagacactattggatggatcacagggcctcca
atgaggagctagagaaagtatccaagagctaagagatcttgcaaccctgt
agtgcaacattatgaactaccagtaccctggagctctgacttctagctgc
atatttatcaaagatgcctagtaagccatcacctggaaggaatgcccatt
ggacaggcaaacttaatttgcccgagatacagggacgcacaggccaaaat
gggaatgggtgtggtgtaggcgagttg
gaattctttgacagattatcatgaggttgtaagagaaccatcagcttcag
ggactcctacatcactgccaatgtttgtttacttggccactgtgtttctc
accgccaatgctttggtttcttattcaaacatcttgaattgtcactgtgc
attgagttcagtaactgttactggtccaagtgtggagatggtatttggag
ttccctctctcattctctcatgtagttttgaactcaaataagaaaataaa
atcagtattgcttttgtctaaaataaacagcaagttgtaagctattagaa
ttataagacaaagtgagaagtgctcattgactatgtaacagaaacacatt
tattaagaagaggccatgcatttgaagaaaggccaggagtgatatatggg
aagatttggagttaagaaataggcagggaaaatctaattaaattatatct
tataatgtttaaataatatgtataaaaactatatttcaatggggcataat
tcaataatgcaaaaaaaagatagctacttttgttcaatccaaattgtgta
agtgggctatcatctaggcttcacagcagcagtcattggtgattgcatat
cacaattacggtgtattttaaaatagctaaaaacagaattttaatccttc
attctagcacgcacataaaaaattgtcacttaattgggtgaatatataaa
tttgatttttatacctttttgaatatgttatattctgtatatctatggtg
atatggctaaatttttctactattaaatattttgaaagatgtcagaatgg
taagactttttttaacttttatttttttaattaggtatttattttatata
catttccaatgctataccaaagtccccaacccgctccccatccactcccc
cacctacccactctcacttcttgacctggcgctcccctgtactcaggcag
aaaaagtttgcaatgaccaatgggcctctctttccactgatggccagcta
ggccatcttctgtacatatgcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_20885774_20886795
seq2: B6Ng01-127C16.g_71_1093

seq1  GAATTCTTTGACAGATTATCATGAGGTTGTAAGAGAACCATCAGCTTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGACAGATTATCATGAGGTTGTAAGAGAACCATCAGCTTCAG  50

seq1  GGACTCCTACATCACTGCCAATGTTTGTTTACTTGGCCACTGTGTTTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCCTACATCACTGCCAATGTTTGTTTACTTGGCCACTGTGTTTCTC  100

seq1  ACCGCCAATGCTTTGGTTTCTTATTCAAACATCTTGAATTGTCACTGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGCCAATGCTTTGGTTTCTTATTCAAACATCTTGAATTGTCACTGTGC  150

seq1  ATTGAGTTCAGTAACTGTTACTGGTCCAAGTGTGGAGATGGTATTTGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGTTCAGTAACTGTTACTGGTCCAAGTGTGGAGATGGTATTTGGAG  200

seq1  TTCCCTCTCTCATTCTCTCATGTAGTTTTGAACTCAAATAAGAAAATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCTCTCATTCTCTCATGTAGTTTTGAACTCAAATAAGAAAATAAA  250

seq1  ATCAGTATTGCTTTTGTCTAAAATAAACAGCAAGTTGTAAGCTATTAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTATTGCTTTTGTCTAAAATAAACAGCAAGTTGTAAGCTATTAGAA  300

seq1  TTATAAGACAAAGTGAGAAGTGCTCATTGACTATGTAACAGAAACACATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGACAAAGTGAGAAGTGCTCATTGACTATGTAACAGAAACACATT  350

seq1  TATTAAGAAGAGGCCATGCATTTGAAGAAAGGCCAGGAGTGATATATGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAGAAGAGGCCATGCATTTGAAGAAAGGCCAGGAGTGATATATGGG  400

seq1  AAGATTTGGAGTTAAGAAATAGGCAGGGAAAATCTAATTAAATTATATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTGGAGTTAAGAAATAGGCAGGGAAAATCTAATTAAATTATATCT  450

seq1  TATAATGTTTAAATAATATGTATAAAAACTATATTTCAATGGGGCATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATGTTTAAATAATATGTATAAAAACTATATTTCAATGGGGCATAAT  500

seq1  TCAATAATGCAAAAAAAAGATAGCTACTTTTGTTCAATCCAAATTGTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAATGCAAAAAAAAGATAGCTACTTTTGTTCAATCCAAATTGTGTA  550

seq1  AGTGGGCTATCATCTAGGCTTCACAGCAGCAGTCATTGGTGATTGCATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGCTATCATCTAGGCTTCACAGCAGCAGTCATTGGTGATTGCATAT  600

seq1  CACAATTACGGTGTATTTTAAAATAGCTAAAAACAGAATTTTAATCCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATTACGGTGTATTTTAAAATAGCTAAAAACAGAATTTTAATCCTTC  650

seq1  ATTCTAGCACGCACAT-AAAAATTGTCACTTAATTGGGTGAATATATAAA  699
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATTCTAGCACGCACATAAAAAATTGTCACTTAATTGGGTGAATATATAAA  700

seq1  TTTGATTTTTATACC-TTTTGAATATGTTATATTCTGTATATCTATGGTG  748
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTGATTTTTATACCTTTTTGAATATGTTATATTCTGTATATCTATGGTG  750

seq1  ATATGGCTAAA-TTTTCTACTATTAAATATTTTGAAAGATGTCAGAATGG  797
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATATGGCTAAATTTTTCTACTATTAAATATTTTGAAAGATGTCAGAATGG  800

seq1  TAAGACTTTTTTTAAC-TTTATTTTTTTAATTAGGTATTTATTTTATATA  846
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TAAGACTTTTTTTAACTTTTATTTTTTTAATTAGGTATTTATTTTATATA  850

seq1  CATTTCCAATGCTATACCAAAAGTCCCCCACCCGCTCCCCCATCCACTCC  896
      |||||||||||||||||| ||||||||| ||||||| |||||||||||||
seq2  CATTTCCAATGCTATACC-AAAGTCCCCAACCCGCT-CCCCATCCACTCC  898

seq1  CCCACCTACCCACTCTCACTTCTTGGCCCTGGCGCTCCCCTGTACTCAGG  946
      |||||||||||||||||||||||| | |||||||||||||||||||||||
seq2  CCCACCTACCCACTCTCACTTCTT-GACCTGGCGCTCCCCTGTACTCAGG  947

seq1  CAGATAAAGTTTGC-ATGACCAATGGGCCTCTCTTTCCACTGATGGCCAG  995
      |||| ||||||||| |||||||||||||||||||||||||||||||||||
seq2  CAGAAAAAGTTTGCAATGACCAATGGGCCTCTCTTTCCACTGATGGCCAG  997

seq1  CTAGGCCATCTTCTGATACATATGCAG  1022
      ||||||||||||||| |||||||||||
seq2  CTAGGCCATCTTCTG-TACATATGCAG  1023