BAC Information

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BAC

Clone NameB6Ng01-127E03
Chromosome15 (Build37)
Map Location 89,272,813 - 89,422,788
singlet/doubletdoublet
Overlap geneMapk8ip2, Arsa, Shank3, Acr, Rabl2a
Upstream geneZdhhc25, Brd1, Zbed4, Alg12, Creld2, Pim3, 1700019P01Rik, Mlc1, LOC667558, Mov10l1, Panx2, Trabd, 1300018J18Rik, Hdac10, Mapk12, Mapk11, Plxnb2, LOC100043185, 1700027J05Rik, Saps2, Sbf1, Adm2, Miox, Tmem112b, Ncaph2, Ecgf1, 2010001J22Rik, Klhdc7b, 1700007E06Rik, Cpt1b, Chkb, C730034F03Rik
Downstream geneLOC676575, Syt10, Alg10b, Cpne8, EG627342
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127E03.bB6Ng01-127E03.g
ACCDH929420DH929421
length748820
definitionDH929420|Mus musculus domesticus DNA, BAC clone: B6Ng01-127E03, 5' end.DH929421|Mus musculus domesticus DNA, BAC clone: B6Ng01-127E03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(89,422,043 - 89,422,788)(89,272,813 - 89,273,634)
sequence
gaattcctctagctgggtgggctgccttatctggcctcagtgggaaagga
tgcacctagccctgcagagacttagtgtgccaaggtgagagaacacccaa
ggtcggggaaggggtgcaggggctctactctctgagaaaaggaagagatg
ggggaagggactgtgtgagggggagtcgggtgggagaggcagctaccggt
atggaaagtgaataaataaattaagggggggtgtgtcgagaaacaaggca
tcacatactgcagcaacctgttgctggccatatgcctctccaacctgcgg
ttcccactcccaccgcagaccagtatgccagagcatccgctctgtcatcc
ccgggtcagtagaacagatgcgcatcctggaaggtgccagacagacaggc
actgcgctagccagcccgcgcctcgctgaggtccttcgggccattgccgg
acagcccagctcggggtcctggtgcggtcgcgtagcagcggcagagacgc
ggccgagctgctgcgggactgcagtcatctgtaaacgggtaaggcggctg
gctgccttggcggcccaggggctgtggtgggcgagcgcatctgcggtgtt
ccgggtccctctaagcctccgcgaagccgaaagtgcctggggaacccgcc
cgagaggtggggcggagggaaggcgtagacccagccgagattctaccgca
gatcgcgggttcctgtataaggagatgaggggttagggtctggtgggc
gaattctgggtttgagtcaggctggagagattcacctggacacagagaaa
gatggctgcatgaaagtgaagaccaggtagccaggcacatagcaagacta
tgtagacacttagactagaataaaccagataattgagtttatgagctagc
cagggaacaggcccaagcttatggcctgtgcatttattcataagtataat
taagtctccgagttgttatttcagggaacttatgtgcaagtaggaaagcc
tgtagttacaaatggcacccatgagggggcattgaatcaaggccgagcct
gaaagttcctggtggaaggcgtgaacaagcatgccctggaaacaaagcag
gctcctaggtagatatggggaactgaaggcagctctctgatgtgagcctc
ggctagcagtgggagcctggctaggtagttgggtccaaaatccaacagtg
agtgcttccaggcagagagccttcccccaagcgttacagctcagtaaatg
cagccagacccagatgatccttgctgaaatagcttgtgtgctttattcta
ggtcaacagggactagctgagcctcagggagtggggtgggattctgtgga
taagtgcattctattggctgagactgtgacactcacggtgctctatttgc
ttggggaagaattccaggcgctgtgctatatgactgacgcttgtgatcac
ctagttggaggtagtggttacagcctcgaagcaagcccggggacaaggag
gaagttagctgagctctccaggtctgagcagggctccacctcacaatccc
tttccttcctctgagggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_89422043_89422788
seq2: B6Ng01-127E03.b_47_794 (reverse)

seq1  GCCCACCAG-GCCTAACCCCTCATCTCCTTATAAAGG-ACCCGCGATCTG  48
      |||||||||  |||||||||||||||||||||| ||| ||||||||||||
seq2  GCCCACCAGACCCTAACCCCTCATCTCCTTATACAGGAACCCGCGATCTG  50

seq1  CGGTCGGCTCTCGGCTGGGTCTCCGCCTTCCCTCCGCCCCACCTCTCGGG  98
      |||| |  |||||||||||||| |||||||||||||||||||||||||||
seq2  CGGTAGAATCTCGGCTGGGTCTACGCCTTCCCTCCGCCCCACCTCTCGGG  100

seq1  CGGGTTCCCCAGGCACTTTCGGCTTCGCGGAGGCTTAGAGGGACCCGGAA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTTCCCCAGGCACTTTCGGCTTCGCGGAGGCTTAGAGGGACCCGGAA  150

seq1  CACCGCAGATGCGCTCGCCCACCACAGCCCCTGGGCCGCCAAGGCAGCCA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGCAGATGCGCTCGCCCACCACAGCCCCTGGGCCGCCAAGGCAGCCA  200

seq1  GCCGCCTTACCCGTTTACAGATGACTGCAGTCCCGCAGCAGCTCGGCCGC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCCTTACCCGTTTACAGATGACTGCAGTCCCGCAGCAGCTCGGCCGC  250

seq1  GTCTCTGCCGCTGCTACGCGACCGCACCAGGACCCCGAGCTGGGCTGTCC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGCCGCTGCTACGCGACCGCACCAGGACCCCGAGCTGGGCTGTCC  300

seq1  GGCAATGGCCCGAAGGACCTCAGCGAGGCGCGGGCTGGCTAGCGCAGTGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATGGCCCGAAGGACCTCAGCGAGGCGCGGGCTGGCTAGCGCAGTGC  350

seq1  CTGTCTGTCTGGCACCTTCCAGGATGCGCATCTGTTCTACTGACCCGGGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGTCTGGCACCTTCCAGGATGCGCATCTGTTCTACTGACCCGGGG  400

seq1  ATGACAGAGCGGATGCTCTGGCATACTGGTCTGCGGTGGGAGTGGGAACC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGAGCGGATGCTCTGGCATACTGGTCTGCGGTGGGAGTGGGAACC  450

seq1  GCAGGTTGGAGAGGCATATGGCCAGCAACAGGTTGCTGCAGTATGTGATG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTTGGAGAGGCATATGGCCAGCAACAGGTTGCTGCAGTATGTGATG  500

seq1  CCTTGTTTCTCGACACACCCCCCCTTAATTTATTTATTCACTTTCCATAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTTCTCGACACACCCCCCCTTAATTTATTTATTCACTTTCCATAC  550

seq1  CGGTAGCTGCCTCTCCCACCCGACTCCCCCTCACACAGTCCCTTCCCCCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTAGCTGCCTCTCCCACCCGACTCCCCCTCACACAGTCCCTTCCCCCA  600

seq1  TCTCTTCCTTTTCTCAGAGAGTAGAGCCCCTGCACCCCTTCCCCGACCTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCCTTTTCTCAGAGAGTAGAGCCCCTGCACCCCTTCCCCGACCTT  650

seq1  GGGTGTTCTCTCACCTTGGCACACTAAGTCTCTGCAGGGCTAGGTGCATC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTTCTCTCACCTTGGCACACTAAGTCTCTGCAGGGCTAGGTGCATC  700

seq1  CTTTCCCACTGAGGCCAGATAAGGCAGCCCACCCAGCTAGAGGAATTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCACTGAGGCCAGATAAGGCAGCCCACCCAGCTAGAGGAATTC  748

seq1: chr15_89272813_89273634
seq2: B6Ng01-127E03.g_68_887

seq1  GAATTCTGGGTTTGAGTCAGGCTGGAGAGATTCACCTGGACACAGAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGTTTGAGTCAGGCTGGAGAGATTCACCTGGACACAGAGAAA  50

seq1  GATGGCTGCATGAAAGTGAAGACCAGGTAGCCAGGCACATAGCAAGACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTGCATGAAAGTGAAGACCAGGTAGCCAGGCACATAGCAAGACTA  100

seq1  TGTAGACACTTAGACTAGAATAAACCAGATAATTGAGTTTATGAGCTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACACTTAGACTAGAATAAACCAGATAATTGAGTTTATGAGCTAGC  150

seq1  CAGGGAACAGGCCCAAGCTTATGGCCTGTGCATTTATTCATAAGTATAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAACAGGCCCAAGCTTATGGCCTGTGCATTTATTCATAAGTATAAT  200

seq1  TAAGTCTCCGAGTTGTTATTTCAGGGAACTTATGTGCAAGTAGGAAAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCTCCGAGTTGTTATTTCAGGGAACTTATGTGCAAGTAGGAAAGCC  250

seq1  TGTAGTTACAAATGGCACCCATGAGGGGGCATTGAATCAAGGCCGAGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTACAAATGGCACCCATGAGGGGGCATTGAATCAAGGCCGAGCCT  300

seq1  GAAAGTTCCTGGTGGAAGGCGTGAACAAGCATGCCCTGGAAACAAAGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTCCTGGTGGAAGGCGTGAACAAGCATGCCCTGGAAACAAAGCAG  350

seq1  GCTCCTAGGTAGATATGGGGAACTGAAGGCAGCTCTCTGATGTGAGCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTAGGTAGATATGGGGAACTGAAGGCAGCTCTCTGATGTGAGCCTC  400

seq1  GGCTAGCAGTGGGAGCCTGGCTAGGTAGTTGGGTCCAAAATCCAACAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGCAGTGGGAGCCTGGCTAGGTAGTTGGGTCCAAAATCCAACAGTG  450

seq1  AGTGCTTCCAGGCAGAGAGCCTTCCCCCAAGCGTTACAGCTCAGTAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTCCAGGCAGAGAGCCTTCCCCCAAGCGTTACAGCTCAGTAAATG  500

seq1  CAGCCAGACCCAGATGATCCTTGCTGAAATAGCTTGTGTGCTTTATTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGACCCAGATGATCCTTGCTGAAATAGCTTGTGTGCTTTATTCTA  550

seq1  GGTCAACAGGGACTAGCTGAGCCTCAGGGAGTGGGGTGGGATTCTGTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAACAGGGACTAGCTGAGCCTCAGGGAGTGGGGTGGGATTCTGTGGA  600

seq1  TAAGTGCATTCTATTGGCTGAGACTGTGACACTCACGGTGCTCTATTTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGCATTCTATTGGCTGAGACTGTGACACTCACGGTGCTCTATTTGC  650

seq1  TTGGGGAAGAATTCCAGGCGCTGTGCTATATGACTGACGCTTGTGATCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGAAGAATTCCAGGCGCTGTGCTATATGACTGACGCTTGTGATCAC  700

seq1  CTAGTTGGAGGTAGTGGTTACAGCCTCGAAGCAGGCCCGGGGACAAGGAG  750
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTAGTTGGAGGTAGTGGTTACAGCCTCGAAGCAAGCCCGGGGACAAGGAG  750

seq1  GAAGTTAGCTGAGCTCTCCAGGGTCTGAGCA-GGCTCCACCTCACAATCC  799
      |||||||||||||||||||| |||||||||| ||||||||||||||||||
seq2  GAAGTTAGCTGAGCTCTCCA-GGTCTGAGCAGGGCTCCACCTCACAATCC  799

seq1  CATTCCCATTCCTCTGATGGATG  822
      | ||||  ||||||||| |||||
seq2  CTTTCC--TTCCTCTGAGGGATG  820