BAC Information

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BAC

Clone NameB6Ng01-128C24
Chromosome15 (Build37)
Map Location 65,151,342 - 65,152,487
singlet/doubletsinglet
Overlap genenone
Upstream geneDdef1, Adcy8, LOC268812, LOC100040790, LOC665836
Downstream geneC920006C10Rik, Oc90, F930104E18Rik, LOC100040835, Kcnq3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128C24.bB6Ng01-128C24.g
ACCDH930107DH930108
length1,1471,111
definitionDH930107|Mus musculus domesticus DNA, BAC clone: B6Ng01-128C24, 5' end.DH930108|Mus musculus domesticus DNA, BAC clone: B6Ng01-128C24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaacctcccgaacagagtttaaataaggctttgtagtatattta
atgaattcatttaccaaggctcagctgccacagctcacatccaacagtgc
actctgtatttatttggtctttggcagcaaccttatcagacgtaagctgc
aaaccaatacgacagcaatgtgaaccagtgtttcacatatataagcagta
gcttaaactgagtgagtgggtcttagaaacacactggacattcagaatcc
agaactatttttccatgaacacaagggaagtggcaaagtatgcaaattga
atcaaaggaaaaaagaaaggaggagagggagatacaaattgagtacacat
gaagggagaggaagtaaggattttcctcacacaggcaagattattaatga
ctaatggaaaagaaagagggaatctacagaaattgagcataagacagaaa
catgccaatgagaagttgggattctatgtacccagggactcagctacaca
tcaaaagccatgatgtagagactgaggtcacactaaaatactctacctcc
aaatacctcaagcaatccacacaggcggtgatgcctaataaggggtacag
aatattttctgcttgttaaatttcttagagtaactcggtgacaggggagc
ttatcttcagtctcagggaactgctaaggtccaggaaagtagactgtgct
gcatgacaatttgacatgaagacaatgacctgggaagctttgagatattg
taccatgagcacatctagacatgttcgagtgcaaaaccagcccccctttt
ggacagcttcttgggtagagattatgacactatgttataattgtggattc
caccactaagcatgtctactgagttatgaactccttgaaaaccagacata
acattttttcatcagcgtaacagagacagtggataatagatcttgacatg
tagaatatttataatgtggttttactgatgcatgtgatatggcattcttt
ttaaattttgtaatattttttattttattttttacactcatatccattct
tgccaccccaatctacttctgactgcttcatgttccatacctcaatcccc
aacccccaccctgtctctgaccacaaatattagggagtctgggagca
gaattcaataactcacttaaagaaatacaaaagaacactgctaaagagtt
acaagtccttaaagaaaaacaggaaaacacaaccaaacaggtagaagtcc
ttatagaaaaacaggaaaacacatccaaacaggtgatggaaatgaacaaa
accatactagacctaaaaagggaagtagacacaataaagaaaacccaaag
tgaggcaacgctggagatagaaaccctaggaaagaaatctggaaacatag
atgccagcatcagcaacagaatacaagagatggaagagagaatctcaggt
gcagaagactccatagagaacatcagcacaacaatcaaagaaactggaaa
atgcaaaaagatcctaactaaaaacatccaggaaatccaggacacaatga
gaagaccaaacctatggataataggagtggatgagaatgaagattttcaa
ctaaaaggaccagcaaacatcttcaacaaaattattgaagaaaacttccc
aaatctaaagaaagagatgcccatgaacatacaagaagcctacagaactc
caaatagactggaccagaaaagaaattcctgccgacacataataatcaga
acatcaaatgcactaaataaagatagaatactaaaagcagtaagggaaaa
aggtcaagtaacatataaaggcaagcctatcagaattacaccagattttt
caccagagactatgaaagccagaagagcctgggcagatgttatacagaca
ctaagagaacacaaatgccagcccaggctactatacccagccaaactctc
aattaccatagatggagaaaccaaagtatttccacgacaaaactaaattc
acccattatctctccacgaatccagcccttcaaaggataataacagaaaa
aaaccaatacaaggacgggaaccacgccctagaaaaacaagaagataatc
cctcaacaaacctaaagaagacagcacaagaacagaatgccaactttaac
aacaaaatacaggagaaacaattacctttcttatatctctaatatcatgg
actcaattcccattaaaaagaacataggacttaaacagaactggctacca
caaacagggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_65151342_65152487
seq2: B6Ng01-128C24.b_29_1175

seq1  GAATTCAAACCTCCCGAACAGAGTTTAAATAAGGCTTTGTAGTATATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACCTCCCGAACAGAGTTTAAATAAGGCTTTGTAGTATATTTA  50

seq1  ATGAATTCATTTACCAAGGCTCAGCTGCCACAGCTCACATCCAACAGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTCATTTACCAAGGCTCAGCTGCCACAGCTCACATCCAACAGTGC  100

seq1  ACTCTGTATTTATTTGGTCTTTGGCAGCAACCTTATCAGACGTAAGCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTATTTATTTGGTCTTTGGCAGCAACCTTATCAGACGTAAGCTGC  150

seq1  AAACCAATACGACAGCAATGTGAACCAGTGTTTCACATATATAAGCAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAATACGACAGCAATGTGAACCAGTGTTTCACATATATAAGCAGTA  200

seq1  GCTTAAACTGAGTGAGTGGGTCTTAGAAACACACTGGACATTCAGAATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAACTGAGTGAGTGGGTCTTAGAAACACACTGGACATTCAGAATCC  250

seq1  AGAACTATTTTTCCATGAACACAAGGGAAGTGGCAAAGTATGCAAATTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTATTTTTCCATGAACACAAGGGAAGTGGCAAAGTATGCAAATTGA  300

seq1  ATCAAAGGAAAAAAGAAAGGAGGAGAGGGAGATACAAATTGAGTACACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGGAAAAAAGAAAGGAGGAGAGGGAGATACAAATTGAGTACACAT  350

seq1  GAAGGGAGAGGAAGTAAGGATTTTCCTCACACAGGCAAGATTATTAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGAGAGGAAGTAAGGATTTTCCTCACACAGGCAAGATTATTAATGA  400

seq1  CTAATGGAAAAGAAAGAGGGAATCTACAGAAATTGAGCATAAGACAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGGAAAAGAAAGAGGGAATCTACAGAAATTGAGCATAAGACAGAAA  450

seq1  CATGCCAATGAGAAGTTGGGATTCTATGTACCCAGGGACTCAGCTACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCAATGAGAAGTTGGGATTCTATGTACCCAGGGACTCAGCTACACA  500

seq1  TCAAAAGCCATGATGTAGAGACTGAGGTCACACTAAAATACTCTACCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGCCATGATGTAGAGACTGAGGTCACACTAAAATACTCTACCTCC  550

seq1  AAATACCTCAAGCAATCCACACAGGCGGTGATGCCTAATAAGGGGTACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCTCAAGCAATCCACACAGGCGGTGATGCCTAATAAGGGGTACAG  600

seq1  AATATTTTCTGCTTGTTAAATTTCTTAGAGTAACTCGGTGACAGGGGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTCTGCTTGTTAAATTTCTTAGAGTAACTCGGTGACAGGGGAGC  650

seq1  TTATCTTCAGTCTCAGGGAACTGCTAAGGTCCAGGAAAGTAGACTGTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTCAGTCTCAGGGAACTGCTAAGGTCCAGGAAAGTAGACTGTGCT  700

seq1  GCATGACAATTTGACATGAAGACAATGACCTGGGAAGCTTTGAGATATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGACAATTTGACATGAAGACAATGACCTGGGAAGCTTTGAGATATTG  750

seq1  TACCATGAGCACATCTAGACATGTTCGAGTGCAAAACCAGCCCCCCTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATGAGCACATCTAGACATGTTCGAGTGCAAAACCAGCCCCCCTTTT  800

seq1  GGACAGCTTCTTGGGTAGAGATTATGACACTATGTTATAATTGTGGATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCTTCTTGGGTAGAGATTATGACACTATGTTATAATTGTGGATTC  850

seq1  CACCACTAAGCATGTCTACTGAGTTATGAACTCCTTGAAAACCAGACATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACTAAGCATGTCTACTGAGTTATGAACTCCTTGAAAACCAGACATA  900

seq1  ACA-TTTTTCATCAGCGTAACAGAGACAGTGGAT-ATAGATCTTGACATG  948
      ||| |||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACATTTTTTCATCAGCGTAACAGAGACAGTGGATAATAGATCTTGACATG  950

seq1  TAGAATATTTATAATGTGGTTTTTACTGATGCATGTGATATGGCATTCTT  998
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TAGAATATTTATAATGTGG-TTTTACTGATGCATGTGATATGGCATTCTT  999

seq1  TTTAAATTTTGTTATA-TTTTTATTTTATTTTTTACACTCCATATTCCAT  1047
      |||||||||||| ||| |||||||||||||||||||||| |||| |||||
seq2  TTTAAATTTTGTAATATTTTTTATTTTATTTTTTACACT-CATA-TCCAT  1047

seq1  TCTTTGCCACCCC-ATCTACCTTCTGACTGCTCCATGTCCCATACCTC-A  1095
      || |||||||||| ||||| |||||||||||| ||||| ||||||||| |
seq2  TC-TTGCCACCCCAATCTA-CTTCTGACTGCTTCATGTTCCATACCTCAA  1095

seq1  TCCCCA--CCCCACCCTGTCTCTGAACCACAAATATAGGGAAGTCTGGAA  1143
      ||||||  |||||||||||||||| |||||||||||  || ||||||| |
seq2  TCCCCAACCCCCACCCTGTCTCTG-ACCACAAATATTAGGGAGTCTGGGA  1144

seq1  GCA  1146
      |||
seq2  GCA  1147