BAC Information

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BAC

Clone NameB6Ng01-128G24
Chromosome15 (Build37)
Map Location 8,594,887 - 8,743,498
singlet/doubletdoublet
Overlap geneSlc1a3
Upstream geneGdnf, Wdr70, LOC665556, LOC621001, Nup155, 2410089E03Rik, LOC100039599, Nipbl, EG666437, LOC100039560, LOC100039633
Downstream geneEG622770, LOC268781, LOC382969, LOC100039619, Ranbp3l, 1110020G09Rik, Skp2, Lmbrd2, LOC666503, Ugt3a1, LOC100039661, Ugt3a2, LOC383094, Capsl, Il7r, C230086A09Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128G24.bB6Ng01-128G24.g
ACCDH930289DH930290
length1,125384
definitionDH930289|Mus musculus domesticus DNA, BAC clone: B6Ng01-128G24, 5' end.DH930290|Mus musculus domesticus DNA, BAC clone: B6Ng01-128G24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,742,360 - 8,743,498)(8,594,887 - 8,595,276)
sequence
gaattcattcaacatgatataaaaggctgcttcatttttaaacaacttgg
cttggactgtgggcctggcccagggagtggcactattaagaggtgtggcc
ttgctggagtaggtgtgtcactgtggacgtggacttaagaccctcatcct
agaagtcagtattctgctggcagccttcagatgaagatgtagaattctca
gctcctcctgtgccatgcctgcctggatgatgccttgatgataacggact
gaacctctgaacttgtaagccagccccaattaaatgttgtccttataaga
gttgccttggtcataatgtctgttcacagcagtaaaaccctaactaagac
agaggaggtttgttatatagtgctgcataagtaacataatcctaaaccac
cataaagtgttggtgcattggtgctgaactggctccaaaaacaccatcct
actgccttgtctgcatggaagtctttctagctatatgttgagatgtgtta
tattgagaatttgattattcttcatgacgttttcctgtattggctttgta
gaaattacagaggataattcagtgtcctgggttactgaaatgaagactat
aggtcttatacacatttttcaaatatatatttgaatatatatacaaattt
gaatacatatatataactataggaaaggcacaaatcagaggagatctgct
attcgctgtctttccaccctgtttatccttttggataaaccggaaatctg
tgtcccatcaaaatctcaaaaacactatttgtccctgtagatttcccact
aattaaaaatgtattctgatgatattattgatggtaacaagttatagctt
tgctattgtatgataaaatgtgacagaatttagaaaatcaagcatagctc
aatgaacccgtttcaaccccagtgactaagagatgctgtcacaaaaaatt
attcataggtaaaaaaacattctaagatcccataagccaattgatttatg
tacaagtatgaaatggttctgagaaagtttgagattttacattgaattaa
tcttaaatatacttctttcaatttcagacagcatcaaggagatggtctaa
gagcagtatggaaactattcctctc
tcccccgctctcccctttggatttagtcttttcttttgtctcctgctctg
aatcttattaagagaagtttggtcataagttgtgacttagcaagtccatg
atacttcctctgcatctgctggatgctgccagaactctgccacagacact
ttcttggggttgaaacagaagggagaactcagcccctactcccaccccga
tgatctggggcctgtgtttgctttttctcctactgggaatgttctttttg
tatgacaggatgtgcccagtcattctgacctgagcagaaagtcacctcaa
tcctttctgtaccatccaaggcagatggcgctcgctctctctctctctct
ctctctctctctctctctctctctctctctctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_8742360_8743498
seq2: B6Ng01-128G24.b_48_1172 (reverse)

seq1  GAGAGGGATAGTTTTCATAACTGCT-TTAGACACTCTCCTTTGATGCTGT  49
      |||||| ||||||| ||| |||||| ||||||  ||||| ||||||||||
seq2  GAGAGGAATAGTTTCCAT-ACTGCTCTTAGACCATCTCC-TTGATGCTGT  48

seq1  CTGAAATTTGAAAAGTGAGTATTAATTTAAGATTAATTACAATGTAAAAA  99
      ||||||||  || |   |||||  |||||||||||||| |||||| ||||
seq2  CTGAAATTGAAAGA---AGTAT--ATTTAAGATTAATT-CAATGT-AAAA  91

seq1  TCTCAAACTATCTCAAGAACCATTTCATACTTTGTTACATTAAAATCAAT  149
      ||||||||| |||| |||||||||||||||||   |||||  ||||||||
seq2  TCTCAAACTTTCTC-AGAACCATTTCATACTT--GTACAT--AAATCAAT  136

seq1  TGGCTTATTGGGATCTTAGAATGTTTTTTTTACCTATGAATAATTTTTTT  199
      ||||||| ||||||||||||||| ||||||||||||||||||| ||||||
seq2  TGGCTTA-TGGGATCTTAGAATG-TTTTTTTACCTATGAATAA-TTTTTT  183

seq1  GTGACAGCATCTCTTAGTCACTGGGGTTGAAACGGGTTCATTGAGCTATG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGCATCTCTTAGTCACTGGGGTTGAAACGGGTTCATTGAGCTATG  233

seq1  CTTGATTTTCTAAATTCTGTCACATTTTATCATACAATAGCAAAGCTATA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTTTCTAAATTCTGTCACATTTTATCATACAATAGCAAAGCTATA  283

seq1  ACTTTGTTACCATCAATAATATCATCAGAATACATTTTTAATTAGTGGGA  349
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AC-TTGTTACCATCAATAATATCATCAGAATACATTTTTAATTAGTGGGA  332

seq1  AATCTACAGGGAC-AATAGTGTTTTTGAGATTTTGATGGGACACAGATTT  398
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AATCTACAGGGACAAATAGTGTTTTTGAGATTTTGATGGGACACAGATTT  382

seq1  CCGGTTTATCC-AAAGGATAAACAGGGTGG-AAGACAGCGAATAGCAGAT  446
      ||||||||||| |||||||||||||||||| |||||||||||||||||||
seq2  CCGGTTTATCCAAAAGGATAAACAGGGTGGAAAGACAGCGAATAGCAGAT  432

seq1  CTCCTCTGATTTGTGCCTTTCCTATAGTTATATATATGTATTCAAATTTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTGATTTGTGCCTTTCCTATAGTTATATATATGTATTCAAATTTG  482

seq1  TATATATATTCAAATATATATTTGAAAAATGTGTATAAGACCTATAGTCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATTCAAATATATATTTGAAAAATGTGTATAAGACCTATAGTCT  532

seq1  TCATTTCAGTAACCCAGGACACTGAATTATCCTCTGTAATTTCTACAAAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCAGTAACCCAGGACACTGAATTATCCTCTGTAATTTCTACAAAG  582

seq1  CCAATACAGGAAAACGTCATGAAGAATAATCAAATTCTCAATATAACACA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATACAGGAAAACGTCATGAAGAATAATCAAATTCTCAATATAACACA  632

seq1  TCTCAACATATAGCTAGAAAGACTTCCATGCAGACAAGGCAGTAGGATGG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAACATATAGCTAGAAAGACTTCCATGCAGACAAGGCAGTAGGATGG  682

seq1  TGTTTTTGGAGCCAGTTCAGCACCAATGCACCAACACTTTATGGTGGTTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTGGAGCCAGTTCAGCACCAATGCACCAACACTTTATGGTGGTTT  732

seq1  AGGATTATGTTACTTATGCAGCACTATATAACAAACCTCCTCTGTCTTAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTATGTTACTTATGCAGCACTATATAACAAACCTCCTCTGTCTTAG  782

seq1  TTAGGGTTTTACTGCTGTGAACAGACATTATGACCAAGGCAACTCTTATA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGTTTTACTGCTGTGAACAGACATTATGACCAAGGCAACTCTTATA  832

seq1  AGGACAACATTTAATTGGGGCTGGCTTACAAGTTCAGAGGTTCAGTCCGT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAACATTTAATTGGGGCTGGCTTACAAGTTCAGAGGTTCAGTCCGT  882

seq1  TATCATCAAGGCATCATCCAGGCAGGCATGGCACAGGAGGAGCTGAGAAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATCAAGGCATCATCCAGGCAGGCATGGCACAGGAGGAGCTGAGAAT  932

seq1  TCTACATCTTCATCTGAAGGCTGCCAGCAGAATACTGACTTCTAGGATGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATCTTCATCTGAAGGCTGCCAGCAGAATACTGACTTCTAGGATGA  982

seq1  GGGTCTTAAGTCCACGTCCACAGTGACACACCTACTCCAGCAAGGCCACA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTTAAGTCCACGTCCACAGTGACACACCTACTCCAGCAAGGCCACA  1032

seq1  CCTCTTAATAGTGCCACTCCCTGGGCCAGGCCCACAGTCCAAGCCAAGTT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTAATAGTGCCACTCCCTGGGCCAGGCCCACAGTCCAAGCCAAGTT  1082

seq1  GTTTAAAAATGAAGCAGCCTTTTATATCATGTTGAATGAATTC  1139
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAAAATGAAGCAGCCTTTTATATCATGTTGAATGAATTC  1125

seq1: chr15_8594887_8595276
seq2: B6Ng01-128G24.g_69_458

seq1  GAATTCTCCCCCGCTCTCCCCTTTGGATTTAGTCTTTTCTTTTGTCTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCCCGCTCTCCCCTTTGGATTTAGTCTTTTCTTTTGTCTCCT  50

seq1  GCTCTGAATCTTATTAAGAGAAGTTTGGTCATAAGTTGTGACTTAGCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGAATCTTATTAAGAGAAGTTTGGTCATAAGTTGTGACTTAGCAAG  100

seq1  TCCATGATACTTCCTCTGCATCTGCTGGATGCTGCCAGAACTCTGCCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGATACTTCCTCTGCATCTGCTGGATGCTGCCAGAACTCTGCCACA  150

seq1  GACACTTTCTTGGGGTTGAAACAGAAGGGAGAACTCAGCCCCTACTCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTTCTTGGGGTTGAAACAGAAGGGAGAACTCAGCCCCTACTCCCA  200

seq1  CCCCGATGATCTGGGGCCTGTGTTTGCTTTTTCTCCTACTGGGAATGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGATGATCTGGGGCCTGTGTTTGCTTTTTCTCCTACTGGGAATGTTC  250

seq1  TTTTTGTATGACAGGATGTGCCCAGTCATTCTGACCTGAGCAGAAAGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTATGACAGGATGTGCCCAGTCATTCTGACCTGAGCAGAAAGTCA  300

seq1  CCTCAATCCTTTCTGTACCATCCAAGGCAGATGGCGCTCGCTCTCTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAATCCTTTCTGTACCATCCAAGGCAGATGGCGCTCGCTCTCTCTCT  350

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCC  390
      ||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCC  390