BAC Information

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BAC

Clone NameB6Ng01-130D13
Chromosome15 (Build37)
Map Location 32,762,087 - 32,763,174
singlet/doubletsinglet
Overlap genenone
Upstream geneTas2r119, 0610007N19Rik, Sema5a, LOC100040962
Downstream geneSdc2, Pgcp, 1700084J12Rik, Tspyl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130D13.bB6Ng01-130D13.g
ACCDH931591DH931592
length1,0671,023
definitionDH931591|Mus musculus domesticus DNA, BAC clone: B6Ng01-130D13, 5' end.DH931592|Mus musculus domesticus DNA, BAC clone: B6Ng01-130D13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccaaacctagaaaaagagatggataatctaatgcaacaaacaa
atagaaaaaaaaatctcaagaaaagtctctccatggcattttataggcaa
tatgtcaaaatacaaagaaacaaacaacattaaaagctggaatcaagctg
gtggaaaaaagccaccctcaaaagcaaacacacgagaacagcatcagatt
ctccccagcagctctaatgatgacagaatggtccacaattcagtacccct
tgatgtatgtgtgatactttataacaccatggcccggcaattttattttt
agagtaacaaatgtgggttttgttcaaagagttatgaaacatgaacaatg
tactgtggtgtaacaatctccctaatactcatggtttaaacactctatat
gattttaaaccttgagccaagtgagggatcacctagaattaacttaaata
cagcaggtgattcaaatacaagtatttgagaaaattgttccttgttggct
atcttggtggattaaactgaccagatcaattttctccttcactctggctg
tagaaatgctaacccatcagcacaatatccttttccttctccaatgatat
gcctattcctaactgctaaactgccaataaagcaaaaatgaatttccgat
cttggtccgggacccgccgaacttaggaaattagtctgaacaggtgagag
ggtgcgccagagaacctgacagcttctggaacaggcggaagcacagaggc
gctgaggcagcaccctgtgtgggccggggacagccggccaccttccggac
cagaggacaggtgcccacccggctggggaggcggcctaagccacagccgc
agcggtcgccatcttggtccgggactcgccgaacttaggaattagtctga
caggtgagagggtgcgcagagaacctgacagcctctggaacagcgagcac
agaggggctgaggcagcaccctgtgtgggcggggacagctgccacttccg
gacgagacagtgccgcctgctgggaggcgactaagccacagcagcagcgt
cgccatctggtcagacc
gaattctttgtatatattggatattagtcccctatcagatttaggattgg
taaagatcctttcccaatctcttggtggcctttttgtcttactgaccatg
tcttttgccttacagaagctttgaaattttatgaggtcccatttgttgat
tcttgattttacagtaaaagccattgctgttctgttaaggagtatttccc
ctgtgtccatatcatcaaggctttcccccactttctcctctataagtttt
agtgtctctggttttatgtggagtttcttgatccacttggactggagctt
tgtacaaggagataaaaatggatcaattcgcattcttctacatgataacc
agcagttgagccagcaccatttgttgaaaatgatgttatttttccagttg
atggttttaattactttgtcaaagatcaagtgaccataggtgtataggtt
catttctggttcttcacttttattccattgatatacctgtctactgctgt
agcagtaccacatagttttttaacacaattgctcagtagtacagcatgag
atcaggcatggtgattccaccagaggttcttttatttgttgagaataatt
tttgctatcctaggtgttttgttattccagatgaattttgcaaattcccc
tttctaactctgtgaagaatttagttggaatttttgatggggattgcatt
gaatctgtagattcctttcagcaagatagccatttttactatattaatcc
tgccaatccatgagcatgggagatcgttccatcttctgagatcttctatt
tctttcttcagagacttgaagttctttatcatacagatttttcacttccc
tagttagagtcacagcaaggtattcatatatttgtgactatgtaaaggtg
ttgtttccctatttatttctcagcctgttaatcatccgtgtaaagaaggc
tactgatttgtttgcgttaatttatatccatctctgcactgaagctggta
ataggcttagtagtttccgggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_32762087_32763174
seq2: B6Ng01-130D13.b_50_1116

seq1  GAATTCTCCAAACCTAGAAAAAGAGATGGATAATCTAATGCAACAAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAAACCTAGAAAAAGAGATGGATAATCTAATGCAACAAACAA  50

seq1  ATAGAAAAAAAAATCTCAAGAAAAGTCTCTCCATGGCATTTTATAGGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAAAAAAATCTCAAGAAAAGTCTCTCCATGGCATTTTATAGGCAA  100

seq1  TATGTCAAAATACAAAGAAACAAACAACATTAAAAGCTGGAATCAAGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCAAAATACAAAGAAACAAACAACATTAAAAGCTGGAATCAAGCTG  150

seq1  GTGGAAAAAAGCCACCCTCAAAAGCAAACACACGAGAACAGCATCAGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAAAAAGCCACCCTCAAAAGCAAACACACGAGAACAGCATCAGATT  200

seq1  CTCCCCAGCAGCTCTAATGATGACAGAATGGTCCACAATTCAGTACCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCAGCAGCTCTAATGATGACAGAATGGTCCACAATTCAGTACCCCT  250

seq1  TGATGTATGTGTGATACTTTATAACACCATGGCCCGGCAATTTTATTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTATGTGTGATACTTTATAACACCATGGCCCGGCAATTTTATTTTT  300

seq1  AGAGTAACAAATGTGGGTTTTGTTCAAAGAGTTATGAAACATGAACAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAACAAATGTGGGTTTTGTTCAAAGAGTTATGAAACATGAACAATG  350

seq1  TACTGTGGTGTAACAATCTCCCTAATACTCATGGTTTAAACACTCTATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGGTGTAACAATCTCCCTAATACTCATGGTTTAAACACTCTATAT  400

seq1  GATTTTAAACCTTGAGCCAAGTGAGGGATCACCTAGAATTAACTTAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTAAACCTTGAGCCAAGTGAGGGATCACCTAGAATTAACTTAAATA  450

seq1  CAGCAGGTGATTCAAATACAAGTATTTGAGAAAATTGTTCCTTGTTGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGGTGATTCAAATACAAGTATTTGAGAAAATTGTTCCTTGTTGGCT  500

seq1  ATCTTGGTGGATTAAACTGACCAGATCAATTTTCTCCTTCACTCTGGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGGTGGATTAAACTGACCAGATCAATTTTCTCCTTCACTCTGGCTG  550

seq1  TAGAAATGCTAACCCATCAGCACAATATCCTTTTCCTTCTCCAATGATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATGCTAACCCATCAGCACAATATCCTTTTCCTTCTCCAATGATAT  600

seq1  GCCTATTCCTAACTGCTAAACTGCCAATAAAGCAAAAATGAATTTCCGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATTCCTAACTGCTAAACTGCCAATAAAGCAAAAATGAATTTCCGAT  650

seq1  CTTGGTCCGGGACCCGCCGAACTTAGGAAATTAGTCTGAACAGGTGAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTCCGGGACCCGCCGAACTTAGGAAATTAGTCTGAACAGGTGAGAG  700

seq1  GGTGCGCCAGAGAACCTGACAGCTTCTGGAACAGGCGGAAGCACAGAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCGCCAGAGAACCTGACAGCTTCTGGAACAGGCGGAAGCACAGAGGC  750

seq1  GCTGAGGCAGCACCCTGTGTGGGCCGGGGACAGCCGGCCACCTTCCGGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGCAGCACCCTGTGTGGGCCGGGGACAGCCGGCCACCTTCCGGAC  800

seq1  CAGAGGACAGGTGCCCACCCGGCTGGGGAGGCGGCCTAAGCCACAGCCGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGACAGGTGCCCACCCGGCTGGGGAGGCGGCCTAAGCCACAGCCGC  850

seq1  AGCGGTCGCCATCTTGGTCCGGGACTCGCCGAACTTAGGAAATTAGTCTG  900
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGCGGTCGCCATCTTGGTCCGGGACTCGCCGAACTTAGG-AATTAGTCTG  899

seq1  AACAGGTGAGAGGGTGCGCCAGAGAACCTGACAGCCTCTGGAACAGGCGG  950
       ||||||||||||||||| |||||||||||||||||||||||||| ||| 
seq2  -ACAGGTGAGAGGGTGCG-CAGAGAACCTGACAGCCTCTGGAACA-GCG-  945

seq1  AAGCACAGAGGGGCTGAGGCAGCACCCTGTGTGGGCCGGGGACAGCCGGC  1000
       |||||||||||||||||||||||||||||||||| ||||||||| | ||
seq2  -AGCACAGAGGGGCTGAGGCAGCACCCTGTGTGGG-CGGGGACAG-CTGC  992

seq1  CACCTTCCGGACCGGAGGACAGGTGCCCGCCCGGCTGGGGAGGCGACCTA  1050
      || |||||||||  || |||| |||||   || ||| ||||||||| |||
seq2  CA-CTTCCGGAC--GA-GACA-GTGCC--GCCTGCT-GGGAGGCGA-CTA  1033

seq1  AGCCACAGCAGCAGCGGTCGCCATCTTGGTCCGAGACC  1088
      ||||||||||||||| ||||||||| |||||  |||||
seq2  AGCCACAGCAGCAGC-GTCGCCATC-TGGTC--AGACC  1067