BAC Information

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BAC

Clone NameB6Ng01-130M10
Chromosome15 (Build37)
Map Location 60,291,017 - 60,292,031
singlet/doubletsinglet
Overlap genenone
Upstream geneNsmce2, Trib1, LOC665602, EG632248, LOC665613, 4933412E24Rik, LOC100040266, LOC623048, LOC211832
Downstream geneLOC623094, EG632412, LOC100040311, D330050I23Rik, 9930014A18Rik, A1bg, LOC100040323
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130M10.bB6Ng01-130M10.g
ACCDH932004DH932005
length1,1571,013
definitionDH932004|Mus musculus domesticus DNA, BAC clone: B6Ng01-130M10, 5' end.DH932005|Mus musculus domesticus DNA, BAC clone: B6Ng01-130M10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactcaggaatactgaatggctgagaagcacttaaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccttgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcaaggatgtggagaaagaggaacactcctccattgctggt
ggaattgcaagcttgtacaaccactctggaagtcagtctggcagttcctc
agaaaaatggacatagtactactggaagatccagcaatacctctcctggg
cttagacccagaagatgttccaactggtaataaggacacatgctccacga
tgttcatagcagccttattcatagatagccagaaactggaaagaagccag
atgcccctcaacagaggaatggatacagaaaatgtggtacatttacacaa
tggagtactactcagctattaaaaacaatgaatttttgaaattcttgtgc
aaatggatgtatctggaggatatcatccttagtgagttaacacaatcaca
aaagaagtcacttgatatgcactcactgataagtggatattagccccaaa
acttagaatacccaagatacaagatacaatttgcaaaacacaagaaaatc
aagaaggaataccaatgtgtggatacttcatttctctttagaatagggaa
caaaatacccatgaaaggagttacagagacaaagtttggagctaaaatga
aaggatgaactatccagagactgccccacccggggatccatcccataatc
agccaccaaacccagacactattgcatatgccagcaagattttgctgaag
ggaccctgatttagctgtctcatatgaggctatgacagtgcctggcaaat
acagaagtggatggtcacaatcatctataggatggagcacaggccccaaa
tggaggagctagagtaagtacccaaggagctgaagggtctgcaaccctat
tagtggacaacagtatgactaaccagtccctagagtctcggtctctagct
gcatgtgtaccaaagatgccatcatggaaagaaatatcctagtctgcaac
ttcaatgctccattccagggaagcagccaaaaacgggatatggttgggtt
ggaatac
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgatggtgtcttttgccttgcagaagcctaaaaggcact
tttatgggagtaaaatggagcaatggagaaatgactcagaagtaaagagt
atgactgctttttcagaggactgaagttctattcccagcatccaaaggca
gctcacaactgcctatgattctagttgcagtagatcatatgtacttgggt
ggccttcatgggcaccagagctaacatgtatgttcacatatatggacata
tcccagatgcatgtaattaaaaatgggaaaataaattttaaaaggctatg
gaatggcaaatcagtcattggaagaaagtatcaggaaacacaatcttcat
acaagacatatcaaatttctgcaaaagaggtcttactcttcaaaagtaag
aaacgggttaaaagtaggcaaaatacctgaacaatcatttctccaaagat
gataaataataaaaggtgtttaacaaaatatagaatagattatctcatga
ggaaattgcaagttaatttcctgagattactgggagaagttactggacac
tagttgaagtgactgaaaactgaaaaaaaaaaaccaaaaaaaacaaaaac
aaaaacgtaacactgatgagaataggggtcaaaaggtcaacaggaactct
catttattggttgatggaaatgcagaatggtatggccacattcaaaggga
aaagaagacatatttctttttattttctcaaaaatccatacacgcataaa
tgtatttttgaccgtgtcacatctctctttttcctcttattctgaagcca
tcctcatatgattcccttctcaacttcatattatctttttaaaaatcaca
cctccccccattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_60291017_60292031
seq2: B6Ng01-130M10.g_68_1075

seq1  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT  50

seq1  TTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC  100

seq1  CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCT  150

seq1  TTTTGTCTTATTGATGGTGTCTTTTGCCTTGCAGAAGCCTAAAAGGCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTATTGATGGTGTCTTTTGCCTTGCAGAAGCCTAAAAGGCACT  200

seq1  TTTATGGGAGTAAAATGGAGCAATGGAGAAATGACTCAGAAGTAAAGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGGGAGTAAAATGGAGCAATGGAGAAATGACTCAGAAGTAAAGAGT  250

seq1  ATGACTGCTTTTTCAGAGGACTGAAGTTCTATTCCCAGCATCCAAAGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTGCTTTTTCAGAGGACTGAAGTTCTATTCCCAGCATCCAAAGGCA  300

seq1  GCTCACAACTGCCTATGATTCTAGTTGCAGTAGATCATATGTACTTGGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACAACTGCCTATGATTCTAGTTGCAGTAGATCATATGTACTTGGGT  350

seq1  GGCCTTCATGGGCACCAGAGCTAACATGTATGTTCACATATATGGACATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCATGGGCACCAGAGCTAACATGTATGTTCACATATATGGACATA  400

seq1  TCCCAGATGCATGTAATTAAAAATGGGAAAATAAATTTTAAAAGGCTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGATGCATGTAATTAAAAATGGGAAAATAAATTTTAAAAGGCTATG  450

seq1  GAATGGCAAATCAGTCATTGGAAGAAAGTATCAGGAAACACAATCTTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCAAATCAGTCATTGGAAGAAAGTATCAGGAAACACAATCTTCAT  500

seq1  ACAAGACATATCAAATTTCTGCAAAAGAGGTCTTACTCTTCAAAAGTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGACATATCAAATTTCTGCAAAAGAGGTCTTACTCTTCAAAAGTAAG  550

seq1  AAACGGGTTAAAAGTAGGCAAAATACCTGAACAATCATTTCTCCAAAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGGGTTAAAAGTAGGCAAAATACCTGAACAATCATTTCTCCAAAGAT  600

seq1  GATAAATAATAAAAGGTGTTTAACAAAATATAGAATAGATTATCTCATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATAATAAAAGGTGTTTAACAAAATATAGAATAGATTATCTCATGA  650

seq1  GGAAATTGCAAGTTAATTTCCTGAGATTACTGGGAGAAGTTACTGGACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTGCAAGTTAATTTCCTGAGATTACTGGGAGAAGTTACTGGACAC  700

seq1  TAGTTGAAGTGACTGAAAACTGAAAAAAAAAAACC-AAAAAAACAAAAAC  749
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TAGTTGAAGTGACTGAAAACTGAAAAAAAAAAACCAAAAAAAACAAAAAC  750

seq1  AAAAACGTAACACTGATGAGAATAGGGGTCAAAAGGTCAACAGGAACTCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACGTAACACTGATGAGAATAGGGGTCAAAAGGTCAACAGGAACTCT  800

seq1  CATTTATTGG-TGATGGAAATGCAGAATGGTATGGCCACATTTCAAAGGG  848
      |||||||||| ||||||||||||||||||||||||||||| |||||||||
seq2  CATTTATTGGTTGATGGAAATGCAGAATGGTATGGCCACA-TTCAAAGGG  849

seq1  AAAAGAAGACATATTTCTTTTTTAATTTCTCAAAAATTCCATACACGCAT  898
      ||||||||||||||||| |||||| ||||||||||| |||||||||||||
seq2  AAAAGAAGACATATTTC-TTTTTATTTTCTCAAAAA-TCCATACACGCAT  897

seq1  AAAATGTA-TTTTGACCGTGTCAACATCTCTCTTTTTCCTCTTATTCTGA  947
       ||||||| ||||||||||||| |||||||||||||||||||||||||||
seq2  -AAATGTATTTTTGACCGTGTC-ACATCTCTCTTTTTCCTCTTATTCTGA  945

seq1  AGCCATCCTCAATATGATTCCCTTCTCAACTTCATATTATCCTTTTTAAA  997
      |||||||||| ||||||||||||||||||||||||||||||  |||| ||
seq2  AGCCATCCTC-ATATGATTCCCTTCTCAACTTCATATTATC--TTTTTAA  992

seq1  AAATCAACAACCTCCCCC  1015
      ||||||   |||||||||
seq2  AAATCA--CACCTCCCCC  1008