BAC Information

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BAC

Clone NameB6Ng01-130M19
Chromosome15 (Build37)
Map Location 50,277,956 - 50,278,674
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039539, LOC665160
Downstream geneTrps1, LOC100039644
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130M19.b
ACCDH932022
length722
definitionDH932022|Mus musculus domesticus DNA, BAC clone: B6Ng01-130M19, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccaaattctcagagcatagctctcagtagctaatggccttcta
caggtcccattctgtgatgcttccatgatggctttcaattactccatatg
ctggagtgtgggcacccaagtgatagcaccagctaagtgatagctgtgag
catgagtatgcagaacacctacaggaacaagcaacatgcttcagatagtg
ggaataaccatggacttttcatcttctctttcaaacattctgctagcata
tcccattgtcacactgatcaaatctaaataggtaccagttgacacatgag
tgtgaaaagtgtttattatgtagtcaaactctctgcaccatgagtgaagt
aggcaaagataattcagagagccaccatgtctaagtaggtcatgtatatt
atgttaaaacactagatggggttgagcaggaacatatgattagcatttag
gaagtgataaaaaaaattagtaaattcttcatactcaattttgaaatgaa
agaaaagagggaagaaggtagagagagagaaggaagggggaaagaaggta
gtgaaggaaagaggaagaaagggcagaaaggataagtgaaagagagagac
gaaaaataaaaaatgtttatgtgctaactttatttcttttaaaagggagt
ctgcaggggaagagtacttataattttattgtctatatttttgtattggt
gaaaaaataaatattaggtact
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_50277956_50278674
seq2: B6Ng01-130M19.b_46_767

seq1  GAATTCACCAAATTCTCAGAGCATAGCTCTCAGTAGCTAATGGCCTTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCAAATTCTCAGAGCATAGCTCTCAGTAGCTAATGGCCTTCTA  50

seq1  CAGGTCCCATTCTGTGATGCTTCCATGATGGCTTTCAATTACTCCATATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCCCATTCTGTGATGCTTCCATGATGGCTTTCAATTACTCCATATG  100

seq1  CTGGAGTGTGGGCACCCAAGTGATAGCACCAGCTAAGTGATAGCTGTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTGTGGGCACCCAAGTGATAGCACCAGCTAAGTGATAGCTGTGAG  150

seq1  CATGAGTATGCAGAACACCTACAGGAACAAGCAACATGCTTCAGATAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGTATGCAGAACACCTACAGGAACAAGCAACATGCTTCAGATAGTG  200

seq1  GGAATAACCATGGACTTTTCATCTTCTCTTTCAAACATTCTGCTAGCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAACCATGGACTTTTCATCTTCTCTTTCAAACATTCTGCTAGCATA  250

seq1  TCCCATTGTCACACTGATCAAATCTAAATAGGTACCAGTTGACACATGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTGTCACACTGATCAAATCTAAATAGGTACCAGTTGACACATGAG  300

seq1  TGTGAAAAGTGTTTATTATGTAGTCAAACTCTCTGCACCATGAGTGAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAAGTGTTTATTATGTAGTCAAACTCTCTGCACCATGAGTGAAGT  350

seq1  AGGCAAAGATAATTCAGAGAGCCACCATGTCTAAGTAGGTCATGTATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAGATAATTCAGAGAGCCACCATGTCTAAGTAGGTCATGTATATT  400

seq1  ATGTTAAAACACTAGATGGGGTTGAGCAGGAACATATGATTAGCATTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAAAACACTAGATGGGGTTGAGCAGGAACATATGATTAGCATTTAG  450

seq1  GAAGTGATAAAAAAAATTAGTAAATTCTTCATACTCAATTTTGAAATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGATAAAAAAAATTAGTAAATTCTTCATACTCAATTTTGAAATGAA  500

seq1  AGAAAAGAGGGAAGAAGGTAGAGAGAGAGAAGGAAGGGGGAAAGAAGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAGGGAAGAAGGTAGAGAGAGAGAAGGAAGGGGGAAAGAAGGTA  550

seq1  GTGAAGGAAAGAGGAAGAAAGGGCAGAAAGGATAAGTGAAAGAGAGAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGGAAAGAGGAAGAAAGGGCAGAAAGGATAAGTGAAAGAGAGAGAC  600

seq1  GAAAAATAAAAAATGTTTATGTGCTAACTTTATTTCTTTAAAAAGGGAGT  650
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GAAAAATAAAAAATGTTTATGTGCTAACTTTATTTCTTTTAAAAGGGAGT  650

seq1  CTGCAGGGGAAGAGTACTTATAA-TTTATTGTCTATA-TTTTGTATTGGT  698
      ||||||||||||||||||||||| ||||||||||||| ||||||||||||
seq2  CTGCAGGGGAAGAGTACTTATAATTTTATTGTCTATATTTTTGTATTGGT  700

seq1  G-AAAAATAAATATTAGGTACT  719
      | ||||||||||||||||||||
seq2  GAAAAAATAAATATTAGGTACT  722


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