BAC Information

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BAC

Clone NameB6Ng01-131A01
Chromosome15 (Build37)
Map Location 62,896,262 - 63,069,645
singlet/doubletdoublet
Overlap genenone
Upstream genePvt1, LOC100040584, H2afy3, LOC100040430, Tsg101-ps
Downstream geneEG239502, EG432959, LOC672194, Mlze, AI987692, Gsdmdc2, 9930109F21Rik, LOC665769, 9030605I04Rik, 4933426G20Rik, 0910001A06Rik, Ddef1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131A01.bB6Ng01-131A01.g
ACCDH932172DH932173
length1,085372
definitionDH932172|Mus musculus domesticus DNA, BAC clone: B6Ng01-131A01, 5' end.DH932173|Mus musculus domesticus DNA, BAC clone: B6Ng01-131A01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,896,262 - 62,897,350)(63,069,268 - 63,069,645)
sequence
gaattctaatataatgtgaaatatacttctagggatttgttcgtggccat
gtagtgtgatgtaagtagagtggattttagtgcaggagagtcttaggtgg
gttgaaaggttggctaaattctgaagataagctggagttcagttaaggaa
tgaagaaaggacatcaccaaaggcacaaggtaatccctttaatggcataa
agagggtcagtaagacatggcacaatttgtatagagaaaacatgagtaaa
attctaacactaatggaactatagcatcatggaaggagagaaactaaact
aagtctctctgtgcaatgtcctttttccttttttttttaattaggtattt
tcctcgtttacatttccaatgctatcccaaaagtcccccatgcccacccc
cccaatcccctacccacccactccccctttttggccctggcgttcccctg
tactggggcatataaagtttgcgagtccaaagggcctctctttccagtga
tggctgactaggccatcttttgaaacatatgcagctagagatgtcctttt
tcttcctgaatgcgaagcttagattcttagtcagtcatcctacatttggc
agttgaataaccattgggacaatgtgtatgctatggtatcatcagatcat
ttgttgaggttaatggtaagataactacaataaaccagttcaggaagtat
tttaaatccatagattctgaactgaaaatttgaactatatgaacatcata
aggttatttgggaaatttaacatgaagatctgaatctttggttcttgcta
atgtagaatgatgggagtcagtccgtggatgagtcttatgaagatttttt
ttttttttggtttttcaagacagggtttctctgtatagccctggctgtcc
tggaactcactttgtagaccaggctgaccttgaactccgaaatccgcctg
cctttgcctccaaagtgctgggattaaagcttaagccaccacactgggca
cgtatgagatttagtgagagaatttaaagtgtgtaagtataaagagctac
aattttactagcagtaagtgtactgtttcaaatag
agtggaagatagaatatttgtgtgatcctgacatgtggaccagctgggct
gaagaacagggcatggaatcagggaagcagggaatggatttagagaagaa
agtagaaatgagcgcagaactcttcattagtcttatgaaagaggtactgt
atatgatctccttttgaagtttagaaaaatggagacagagtcttcaactc
actgcacattgaaagcagtaattcatgttcatacatgaggcagagaactg
aagtttagctttctaaactccaaagtgtaggacacattttctgtactgtt
tctttaatggtaaattgtatactgtataaaatattttaggtattattttt
ttcttttaattattttagtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_62896262_62897350
seq2: B6Ng01-131A01.b_42_1126

seq1  GAATTCTAATATAATGTGAAATATACTTCTAGGGATTTGTTCGTGGCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATATAATGTGAAATATACTTCTAGGGATTTGTTCGTGGCCAT  50

seq1  GTAGTGTGATGTAAGTAGAGTGGATTTTAGTGCAGGAGAGTCTTAGGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGTGATGTAAGTAGAGTGGATTTTAGTGCAGGAGAGTCTTAGGTGG  100

seq1  GTTGAAAGGTTGGCTAAATTCTGAAGATAAGCTGGAGTTCAGTTAAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAAGGTTGGCTAAATTCTGAAGATAAGCTGGAGTTCAGTTAAGGAA  150

seq1  TGAAGAAAGGACATCACCAAAGGCACAAGGTAATCCCTTTAATGGCATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAAGGACATCACCAAAGGCACAAGGTAATCCCTTTAATGGCATAA  200

seq1  AGAGGGTCAGTAAGACATGGCACAATTTGTATAGAGAAAACATGAGTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGTCAGTAAGACATGGCACAATTTGTATAGAGAAAACATGAGTAAA  250

seq1  ATTCTAACACTAATGGAACTATAGCATCATGGAAGGAGAGAAACTAAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAACACTAATGGAACTATAGCATCATGGAAGGAGAGAAACTAAACT  300

seq1  AAGTCTCTCTGTGCAATGTCCTTTTTCCTTTTTTTTTTAATTAGGTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTCTCTGTGCAATGTCCTTTTTCCTTTTTTTTTTAATTAGGTATTT  350

seq1  TCCTCGTTTACATTTCCAATGCTATCCCAAAAGTCCCCCATGCCCACCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCGTTTACATTTCCAATGCTATCCCAAAAGTCCCCCATGCCCACCCC  400

seq1  CCCAATCCCCTACCCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATCCCCTACCCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTG  450

seq1  TACTGGGGCATATAAAGTTTGCGAGTCCAAAGGGCCTCTCTTTCCAGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGGGCATATAAAGTTTGCGAGTCCAAAGGGCCTCTCTTTCCAGTGA  500

seq1  TGGCTGACTAGGCCATCTTTTGAAACATATGCAGCTAGAGATGTCCTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGACTAGGCCATCTTTTGAAACATATGCAGCTAGAGATGTCCTTTT  550

seq1  TCTTCCTGAATGCGAAGCTTAGATTCTTAGTCAGTCATCCTACATTTGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTGAATGCGAAGCTTAGATTCTTAGTCAGTCATCCTACATTTGGC  600

seq1  AGTTGAATAACCATTGGGACAATGTGTATGCTATGGTATCATCAGATCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAATAACCATTGGGACAATGTGTATGCTATGGTATCATCAGATCAT  650

seq1  TTGTTGAGGTTAATGGTAAGATAACTACAATAAACCAGTTCAGGAAGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGAGGTTAATGGTAAGATAACTACAATAAACCAGTTCAGGAAGTAT  700

seq1  TTTAAATCCATAGATTCTGAACTGAAAATTTGAACTATATGAACATCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATCCATAGATTCTGAACTGAAAATTTGAACTATATGAACATCATA  750

seq1  AGGTTATTTGGGAAATTTAACATGAAGATCTGAATCTTTGGTTCTTGCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTATTTGGGAAATTTAACATGAAGATCTGAATCTTTGGTTCTTGCTA  800

seq1  ATGTAGAATGATGGGAGTCAGTCCGTGGATGAGTCTTATGAAGA-TTTTT  849
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATGTAGAATGATGGGAGTCAGTCCGTGGATGAGTCTTATGAAGATTTTTT  850

seq1  TTTTTTTTGGTTTTTCAAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTGGTTTTTCAAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCC  900

seq1  TGGAACTCACTTTGTAGACCAGGCTGACCTTGAACTCCGAAATCCGCCTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTCACTTTGTAGACCAGGCTGACCTTGAACTCCGAAATCCGCCTG  950

seq1  CCTTTGCCTCCAAAGTGCTGGGATTAAAGGCTTAAGCCACCACACTGGGC  999
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CCTTTGCCTCCAAAGTGCTGGGATTAAA-GCTTAAGCCACCACACTGGGC  999

seq1  ACGTTATGAGGATTTTAAGTGAGAGAATTTAA--GGTGTAAGTTATAAGA  1047
      ||| ||||| |||||  |||||||||||||||   ||||||| |||||  
seq2  ACG-TATGA-GATTT--AGTGAGAGAATTTAAAGTGTGTAAG-TATAAAG  1044

seq1  AGCTACCATTTTTACTAGCAGTAAGTGTACTGTTACAAATAG  1089
      ||||| || ||||||||||||||||||||||||| |||||||
seq2  AGCTA-CAATTTTACTAGCAGTAAGTGTACTGTTTCAAATAG  1085

seq1: chr15_63069268_63069645
seq2: B6Ng01-131A01.g_67_444 (reverse)

seq1  CACACTAAAATAATTAAAAGAAAAAAATAATACCTAAAATATTTTATACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTAAAATAATTAAAAGAAAAAAATAATACCTAAAATATTTTATACA  50

seq1  GTATACAATTTACCATTAAAGAAACAGTACAGAAAATGTGTCCTACACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACAATTTACCATTAAAGAAACAGTACAGAAAATGTGTCCTACACTT  100

seq1  TGGAGTTTAGAAAGCTAAACTTCAGTTCTCTGCCTCATGTATGAACATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTTAGAAAGCTAAACTTCAGTTCTCTGCCTCATGTATGAACATGA  150

seq1  ATTACTGCTTTCAATGTGCAGTGAGTTGAAGACTCTGTCTCCATTTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGCTTTCAATGTGCAGTGAGTTGAAGACTCTGTCTCCATTTTTCT  200

seq1  AAACTTCAAAAGGAGATCATATACAGTACCTCTTTCATAAGACTAATGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCAAAAGGAGATCATATACAGTACCTCTTTCATAAGACTAATGAA  250

seq1  GAGTTCTGCGCTCATTTCTACTTTCTTCTCTAAATCCATTCCCTGCTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCTGCGCTCATTTCTACTTTCTTCTCTAAATCCATTCCCTGCTTCC  300

seq1  CTGATTCCATGCCCTGTTCTTCAGCCCAGCTGGTCCACATGTCAGGATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTCCATGCCCTGTTCTTCAGCCCAGCTGGTCCACATGTCAGGATCA  350

seq1  CACAAATATTCTATCTTCCACTGAATTC  378
      ||||||||||||||||||||||||||||
seq2  CACAAATATTCTATCTTCCACTGAATTC  378