BAC Information

Click to search

BAC

Clone NameB6Ng01-131D02
Chromosome15 (Build37)
Map Location 22,035,120 - 22,036,021
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh12, LOC100040351
Downstream geneEG545091, Cdh18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131D02.bB6Ng01-131D02.g
ACCDH932313DH932314
length9031,169
definitionDH932313|Mus musculus domesticus DNA, BAC clone: B6Ng01-131D02, 5' end.DH932314|Mus musculus domesticus DNA, BAC clone: B6Ng01-131D02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggaaactgatgtcttacgactctaggaaattgccagatagact
cattctttgtcacttggtttgcaggtacttggttttggacagttgtcatg
gaaacctattaatttagcctgtcttacttatagaatttcattgaaaaatt
catacctttcttttgataagaatgttatttgtcacacaatttccacactt
tgtctgaacaatatcaattcatccttcaatatcaacatcaaaattggtat
ctaccaaagttcattatctagtaaacaacttcgtgtaacaaacaacattg
ccagtcaatatgccattctaagtatgaatacatttgccagtttccatctt
ctgccagactttggttacacttactatagatcctttagcttaattataaa
agctttatatcaaaaaagaaatgcagggacagtggatggagcagagagag
agggaatgggcaatcaataatcatcacaactagagatccattccatgggc
aagcaccaatccctgacattgttaattatactttgttatgctagcagaca
ggagtctggcatggctgtcccatggctgtcctctgagaggctccatccag
cagctgactgagacagatatacacacccacagccaaacagtggctggagc
ttagggactcttatggaagagtaggtggaaggattgcaggcacgaagata
atagcaactccacagtaagaccaacaaaatcaactaacctgaaccttggg
caactagagcatgttatcccaaaactggttgcctgtctgtgggataagtt
tttctagttaagctaccttgtctggactcagggggagagtatgggcttac
ccctgcagaaactttgtgtcagtgtaggtagatgtggagtgggggtgggg
tgg
gaattctcacctgaggaatactgaatggcggagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacaat
agatgctggtgtggatttggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcgcttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctaggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagaagccttatttataatagccagaagctggaaagaacccagat
gtccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagacataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacaaagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaatgctgacaccattgcatatactagcaagattttatcgaaa
ggatccagatgtagctgtctcttgtgagactatgctggggcctagcaaca
cagaagtggatgctcacagtcagctaatggatggatcacagggctccaat
gagagtagagaaagtacccaagtagctataggatctgcaacctataggtc
gaacaacattatgactaccagtaccccgagctctgacttctagctgtata
tgtattcaaagatggcctagtcgccatcactgtaagagagcccattggac
attgccaacctgtatgccagtcggttacgccaagtccaatagggaatggc
ctggtagggaatattttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_22035120_22036021
seq2: B6Ng01-131D02.b_48_950

seq1  GAATTCAGGAAACTGATGTCTTACGACTCTAGGAAATTGCCAGATAGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAAACTGATGTCTTACGACTCTAGGAAATTGCCAGATAGACT  50

seq1  CATTCTTTGTCACTTGGTTTGCAGGTACTTGGTTTTGGACAGTTGTCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTTGTCACTTGGTTTGCAGGTACTTGGTTTTGGACAGTTGTCATG  100

seq1  GAAACCTATTAATTTAGCCTGTCTTACTTATAGAATTTCATTGAAAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCTATTAATTTAGCCTGTCTTACTTATAGAATTTCATTGAAAAATT  150

seq1  CATACCTTTCTTTTGATAAGAATGTTATTTGTCACACAATTTCCACACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCTTTCTTTTGATAAGAATGTTATTTGTCACACAATTTCCACACTT  200

seq1  TGTCTGAACAATATCAATTCATCCTTCAATATCAACATCAAAATTGGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGAACAATATCAATTCATCCTTCAATATCAACATCAAAATTGGTAT  250

seq1  CTACCAAAGTTCATTATCTAGTAAACAACTTCGTGTAACAAACAACATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAAAGTTCATTATCTAGTAAACAACTTCGTGTAACAAACAACATTG  300

seq1  CCAGTCAATATGCCATTCTAAGTATGAATACATTTGCCAGTTTCCATCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCAATATGCCATTCTAAGTATGAATACATTTGCCAGTTTCCATCTT  350

seq1  CTGCCAGACTTTGGTTACACTTACTATAGATCCTTTAGCTTAATTATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAGACTTTGGTTACACTTACTATAGATCCTTTAGCTTAATTATAAA  400

seq1  AGCTTTATATCAAAAAAGAAATGCAGGGACAGTGGATGGAGCAGAGAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTATATCAAAAAAGAAATGCAGGGACAGTGGATGGAGCAGAGAGAG  450

seq1  AGGGAATGGGCAATCAATAATCATCACAACTAGAGATCCATTCCATGGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAATGGGCAATCAATAATCATCACAACTAGAGATCCATTCCATGGGC  500

seq1  AAGCACCAATCCCTGACATTGTTAATTATACTTTGTTATGCTAGCAGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACCAATCCCTGACATTGTTAATTATACTTTGTTATGCTAGCAGACA  550

seq1  GGAGTCTGGCATGGCTGTCCCATGGCTGTCCTCTGAGAGGCTCCATCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCTGGCATGGCTGTCCCATGGCTGTCCTCTGAGAGGCTCCATCCAG  600

seq1  CAGCTGACTGAGACAGATATACACACCCACAGCCAAACAGTGGCTGGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGACTGAGACAGATATACACACCCACAGCCAAACAGTGGCTGGAGC  650

seq1  TTAGGGACTCTTATGGAAGAGTAGGTGGAAGGATTGCAGGCACGAAGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGACTCTTATGGAAGAGTAGGTGGAAGGATTGCAGGCACGAAGATA  700

seq1  ATAGCAACTCCACAGTAAGACCAACAAAATCAACTAACCTGAACCTTGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAACTCCACAGTAAGACCAACAAAATCAACTAACCTGAACCTTGGG  750

seq1  CAACTAGAGCATGTTATCCCAAAACTGGTTGCCTGTCTGTGGGATAAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAGAGCATGTTATCCCAAAACTGGTTGCCTGTCTGTGGGATAAGTT  800

seq1  TTTCTAGTTAAGCTACCTTGTCTGGACTCAGGGGGAGAGTATGGGCTTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGTTAAGCTACCTTGTCTGGACTCAGGGGGAGAGTATGGGCTTAC  850

seq1  CCCTGCAGAAACTTTGTGTCAGTGTAGGTAGATGTGGAGT-GGGGTGGGG  899
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCCTGCAGAAACTTTGTGTCAGTGTAGGTAGATGTGGAGTGGGGGTGGGG  900

seq1  TGG  902
      |||
seq2  TGG  903