BAC Information

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BAC

Clone NameB6Ng01-131P15
Chromosome15 (Build37)
Map Location 62,364,507 - 62,567,662
singlet/doubletdoublet
Overlap genenone
Upstream geneMyc, Pvt1, LOC100040584, H2afy3
Downstream geneLOC100040430, Tsg101-ps, EG239502, EG432959
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131P15.bB6Ng01-131P15.g
ACCDH932900DH932901
length6221,103
definitionDH932900|Mus musculus domesticus DNA, BAC clone: B6Ng01-131P15, 5' end.DH932901|Mus musculus domesticus DNA, BAC clone: B6Ng01-131P15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,567,041 - 62,567,662)(62,364,507 - 62,365,614)
sequence
gaattcacaagtatgacttttttactgaatgctcaaacctgttatataaa
agaaatgagtgatggaaatatactacgaggcagggaaggaaaagcctgat
ttataatttcccagtgtggaatctgtattttttttttatgttctgtgttt
ctttgtaaaaactcaatgatggtgccagccccaacgtgttgtaagaaaca
cataaaagcaggtatgcaaattaactcacacaacacctccagggagtgaa
gaaagactgatgcatattagtctcctcatccactttccttttccttgttc
caagacattgcttttttgtactgatctaagtggaagacagtagtaacagc
agttcacaggggacttttaggtcaagaccatttgtttagtgagtgctcat
tgccaatgcttagtcttctgtatagactggattgttgtccaccacacatg
agctgcagcttccatgtatgcttgaagcactgtttcaaagtttggattag
actcaaattcatttcctgcatctgacatggttctttgttgataggaagga
tatagagtctcatatttcacatgtatggccttaaagaaagttgagagatg
ggggagggggagagaggaagaa
gaattctccgtggaaaggctcacataatgatggtggtcatgagcataagg
taagaccagtttccccggggtacccatggcaggattgattcactagtatc
catagtaaccaaaattctctgctgttcagttccctatcagagtgacatca
tatgctcatatgacctaccaataccttctcatataatttaataaattaag
ttgtgtctaggttattaagttgtacagtattatttagagaataatggcaa
ggaaaaacgtctgtactagagctgtcaaaatatattttccccaatatttt
cagttctttgttggttgaatccactggtactgaacctgagcatataaaca
accaccgtggctaacctctaacttaaaagagtttataaattatgtaacaa
gcattgcgttaggagatccaggctcctaggaaactgaacagggcaggcat
tttgccaggacagaggacaagaggactttggaagtcagtgaagaacctta
tttggactaagtcctaggaaaacattctgtggacacttctctggagtaac
tccatgtgtgtcctttgggagtctgttgatctatgcagtgaagggcagga
ctggaggagttaggagaaatagttgaaggttaggtcatctccagtgtcct
caatatactaagaattcagacacatattaagagaattttaatatgccaat
tgcaaaccatgccttatctgatttttctaggttcactgatgatcttcacc
ctaacagagaatagtaggaaccattattataactgaataaatgaaggacc
tacaaagctcagcttctaggaggccgcacgattggtggctgtactggttg
gttttgggtgtcaacttgacacaggctggagttatctcagagaaaggagc
ttcagttggggagatgcctccacgagatccagctgtaaggcactttctca
attcgtgatcaagggaaaaggcccctgtgggtgggaccatctctgggctg
gtagtcttgagtcaatagaagagcagctgagcagccaggggaagccagcc
agtaaggactcttcctccttgacctctgcttcagctcctgctccctgacc
tgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_62567041_62567662
seq2: B6Ng01-131P15.b_47_668 (reverse)

seq1  TTCTTCCTCTCTCCCCCTCCCCCATCTCTCAACTTTCTTTAAGGCCATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTCTCTCCCCCTCCCCCATCTCTCAACTTTCTTTAAGGCCATAC  50

seq1  ATGTGAAATATGAGACTCTATATCCTTCCTATCAACAAAGAACCATGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAATATGAGACTCTATATCCTTCCTATCAACAAAGAACCATGTCA  100

seq1  GATGCAGGAAATGAATTTGAGTCTAATCCAAACTTTGAAACAGTGCTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAGGAAATGAATTTGAGTCTAATCCAAACTTTGAAACAGTGCTTCA  150

seq1  AGCATACATGGAAGCTGCAGCTCATGTGTGGTGGACAACAATCCAGTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATACATGGAAGCTGCAGCTCATGTGTGGTGGACAACAATCCAGTCTA  200

seq1  TACAGAAGACTAAGCATTGGCAATGAGCACTCACTAAACAAATGGTCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAAGACTAAGCATTGGCAATGAGCACTCACTAAACAAATGGTCTTG  250

seq1  ACCTAAAAGTCCCCTGTGAACTGCTGTTACTACTGTCTTCCACTTAGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAAAGTCCCCTGTGAACTGCTGTTACTACTGTCTTCCACTTAGATC  300

seq1  AGTACAAAAAAGCAATGTCTTGGAACAAGGAAAAGGAAAGTGGATGAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAAAAAAGCAATGTCTTGGAACAAGGAAAAGGAAAGTGGATGAGGA  350

seq1  GACTAATATGCATCAGTCTTTCTTCACTCCCTGGAGGTGTTGTGTGAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAATATGCATCAGTCTTTCTTCACTCCCTGGAGGTGTTGTGTGAGTT  400

seq1  AATTTGCATACCTGCTTTTATGTGTTTCTTACAACACGTTGGGGCTGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCATACCTGCTTTTATGTGTTTCTTACAACACGTTGGGGCTGGCA  450

seq1  CCATCATTGAGTTTTTACAAAGAAACACAGAACATAAAAAAAAAATACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCATTGAGTTTTTACAAAGAAACACAGAACATAAAAAAAAAATACAG  500

seq1  ATTCCACACTGGGAAATTATAAATCAGGCTTTTCCTTCCCTGCCTCGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCACACTGGGAAATTATAAATCAGGCTTTTCCTTCCCTGCCTCGTAG  550

seq1  TATATTTCCATCACTCATTTCTTTTATATAACAGGTTTGAGCATTCAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTCCATCACTCATTTCTTTTATATAACAGGTTTGAGCATTCAGTA  600

seq1  AAAAAGTCATACTTGTGAATTC  622
      ||||||||||||||||||||||
seq2  AAAAAGTCATACTTGTGAATTC  622

seq1: chr15_62364507_62365614
seq2: B6Ng01-131P15.g_70_1172

seq1  GAATTCTCCGTGGAAAGGCTCACATAATGATGGTGGTCATGAGCATAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCGTGGAAAGGCTCACATAATGATGGTGGTCATGAGCATAAGG  50

seq1  TAAGACCAGTTTCCCCGGGGTACCCATGGCAGGATTGATTCACTAGTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACCAGTTTCCCCGGGGTACCCATGGCAGGATTGATTCACTAGTATC  100

seq1  CATAGTAACCAAAATTCTCTGCTGTTCAGTTCCCTATCAGAGTGACATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTAACCAAAATTCTCTGCTGTTCAGTTCCCTATCAGAGTGACATCA  150

seq1  TATGCTCATATGACCTACCAATACCTTCTCATATAATTTAATAAATTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTCATATGACCTACCAATACCTTCTCATATAATTTAATAAATTAAG  200

seq1  TTGTGTCTAGGTTATTAAGTTGTACAGTATTATTTAGAGAATAATGGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCTAGGTTATTAAGTTGTACAGTATTATTTAGAGAATAATGGCAA  250

seq1  GGAAAAACGTCTGTACTAGAGCTGTCAAAATATATTTTCCCCAATATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAACGTCTGTACTAGAGCTGTCAAAATATATTTTCCCCAATATTTT  300

seq1  CAGTTCTTTGTTGGTTGAATCCACTGGTACTGAACCTGAGCATATAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTTTGTTGGTTGAATCCACTGGTACTGAACCTGAGCATATAAACA  350

seq1  ACCACCGTGGCTAACCTCTAACTTAAAAGAGTTTATAAATTATGTAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCGTGGCTAACCTCTAACTTAAAAGAGTTTATAAATTATGTAACAA  400

seq1  GCATTGCGTTAGGAGATCCAGGCTCCTAGGAAACTGAACAGGGCAGGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGCGTTAGGAGATCCAGGCTCCTAGGAAACTGAACAGGGCAGGCAT  450

seq1  TTTGCCAGGACAGAGGACAAGAGGACTTTGGAAGTCAGTGAAGAACCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCAGGACAGAGGACAAGAGGACTTTGGAAGTCAGTGAAGAACCTTA  500

seq1  TTTGGACTAAGTCCTAGGAAAACATTCTGTGGACACTTCTCTGGAGTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGACTAAGTCCTAGGAAAACATTCTGTGGACACTTCTCTGGAGTAAC  550

seq1  TCCATGTGTGTCCTTTGGGAGTCTGTTGATCTATGCAGTGAAGGGCAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGTGTGTCCTTTGGGAGTCTGTTGATCTATGCAGTGAAGGGCAGGA  600

seq1  CTGGAGGAGTTAGGAGAAATAGTTGAAGGTTAGGTCATCTCCAGTGTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGAGTTAGGAGAAATAGTTGAAGGTTAGGTCATCTCCAGTGTCCT  650

seq1  CAATATACTAAGAATTCAGACACATATTAAGAGAATTTTAATATGCCAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATACTAAGAATTCAGACACATATTAAGAGAATTTTAATATGCCAAT  700

seq1  TGCAAACCATGCCTTATCTGATTTTTCTAGGTTCACTGATGATCTTCACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACCATGCCTTATCTGATTTTTCTAGGTTCACTGATGATCTTCACC  750

seq1  CTAACAGAGAATAGTAGGAACCATTATTATAACTGAATAAATGAAGGACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAGAGAATAGTAGGAACCATTATTATAACTGAATAAATGAAGGACC  800

seq1  TACAAAGCTCAGCTTCTAGGAGGCCGCACGATTGGTGGCTGTACTGGTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGCTCAGCTTCTAGGAGGCCGCACGATTGGTGGCTGTACTGGTTG  850

seq1  GTTTTGGGTGTCAACTTGACACAGGCTGGAGTTATCTCAGAGAAAGGAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGGGTGTCAACTTGACACAGGCTGGAGTTATCTCAGAGAAAGGAGC  900

seq1  TTCAGTTGGGGAGATGCCTCCACGAGATCCAGCTGTAAGGCACTTTCTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTGGGGAGATGCCTCCACGAGATCCAGCTGTAAGGCACTTTCTCA  950

seq1  ATTCGTGATCAAGGGGAAAAGGCCCCTTGTGGGTGGGACCATCTCTGGGC  1000
      |||||||||||| ||||||||||||| |||||||||||||||||||||||
seq2  ATTCGTGATCAA-GGGAAAAGGCCCC-TGTGGGTGGGACCATCTCTGGGC  998

seq1  TGGTAGTCTTGAGTTCTATAAGAGAGCAGGCTGAGCAAGCCAGGGGAAGC  1050
      ||||||||||||| || |||  |||||| ||||||| |||||||||||||
seq2  TGGTAGTCTTGAG-TCAATAGAAGAGCA-GCTGAGC-AGCCAGGGGAAGC  1045

seq1  AAGCCAGTAAGGAACATCTCTCCATGGCCTCTGCATCAGCTCCTGCTCCC  1100
       ||||||||||||   |  |||| || ||||||| |||||||||||||||
seq2  CAGCCAGTAAGGACTCTTCCTCCTTGACCTCTGCTTCAGCTCCTGCTCCC  1095

seq1  TGACCTGC  1108
      ||||||||
seq2  TGACCTGC  1103