BAC Information

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BAC

Clone NameB6Ng01-132G14
Chromosome15 (Build37)
Map Location 27,485,481 - 27,675,785
singlet/doubletdoublet
Overlap geneAnk, BC087945, LOC100040622, BC052328, Trio
Upstream geneFbxl7, LOC622531, LOC625311
Downstream geneLOC667126, Dnahc5, EG382974, LOC100040675, LOC100040689, LOC100040702, LOC667153
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132G14.bB6Ng01-132G14.g
ACCDH933220DH933221
length1,224190
definitionDH933220|Mus musculus domesticus DNA, BAC clone: B6Ng01-132G14, 5' end.DH933221|Mus musculus domesticus DNA, BAC clone: B6Ng01-132G14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,485,481 - 27,486,753)(27,675,596 - 27,675,785)
sequence
gaattcttctagacctatctaactgtctgtctgtctatctatctactacc
tatccactacctatatgtctagctatccttagatatagatttgtaataat
gagcctttataagaacctctctccctcattcacctagacacacatctgta
catgtgcacatgcacgtgtatatacctgcagcactatcctaataacacag
ttggggagatatttgctagaagtcatgcagctttccacccagatggcatt
aagacaacaagacaacctataaaatgctattacaaatgttagctacattt
aaaaagcaaagcaaaacaaaaccatttgacaggttgggacctcggagctg
gagaagggagtaaaggcagccgctgctacacaaattctcaacctaggcat
ggagatttgtccatcctgttctgctcaggcgccatcacatgtctctgtgt
tctagtttgctttctgttgctgtgatggagatcatggacagaagccgctt
ggggaggaaagggttaatttcatctcacaactccagattgtagtccatca
ctgagcaagccaaggcaggagctggaggcaggaaccaagcagactatgaa
ggcacactagttattgacctacttcctgtgacttgttcagcccactttct
tatacaacctaggccaacctgtctaggagtggaactgtataatgagccaa
accgttctgtatcagtcatcaatcaaacattctcccgcccccacccccac
aggcttgcctacagcatattctaatagagctatttcctcatttgagactc
tctcttgtaagatgaaccttagcttgtgtcaaggtgacagaaatctaacc
ggcagtctgtcggtctacttgggcattgaggtagacgtaaagttcttaca
cagatgctgttgtaagcgagcatcaccctccccacctgctgctggctgag
ctgcgggttgcctgtttagaccttctgctagcttcttcagcacacaaaca
gctcagatcaggagacacattctttcagagccctgatttgctctgaccat
gacgtcagtctcttcagaccacttgggactagcctctatctaaagctatt
aaggatcaagggtgtccggactctagtgtcttccctcttgttagtcagtc
acgtcaggccagacatatcacgtcctactcctatggctactgaatggtgt
gcattcactctgtgtactagcacg
tgctgaggtcagggcagggtgcaaacagatggccccgagctgactgggtg
accctgtcggctgggccactgatagactttccctcccaccaccatgagca
cgcattagagtcagccagagccccgcctccctgtcactggctgggtggcc
tgtgcacacttatcaccctactctgggggggggggggggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_27485481_27486753
seq2: B6Ng01-132G14.b_43_1266

seq1  GAATTCTTCTAGACCTATCTAACTGTCTGTCTGTCTATCTATCTACTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTAGACCTATCTAACTGTCTGTCTGTCTATCTATCTACTACC  50

seq1  TATCCACTACCTATATGTCTAGCTATCCTTAGATATAGATTTGTAATAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCACTACCTATATGTCTAGCTATCCTTAGATATAGATTTGTAATAAT  100

seq1  GAGCCTTTATAAGAACCTCTCTCCCTCATTCACCTAGACACACATCTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTTTATAAGAACCTCTCTCCCTCATTCACCTAGACACACATCTGTA  150

seq1  CATGTGCACATGCACGTGTATATACCTGCAGCACTATCCTAATAACACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGCACATGCACGTGTATATACCTGCAGCACTATCCTAATAACACAG  200

seq1  TTGGGGAGATATTTGCTAGAAGTCATGCAGCTTTCCACCCAGATGGCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGAGATATTTGCTAGAAGTCATGCAGCTTTCCACCCAGATGGCATT  250

seq1  AAGACAACAAGACAACCTATAAAATGCTATTACAAATGTTAGCTACATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAACAAGACAACCTATAAAATGCTATTACAAATGTTAGCTACATTT  300

seq1  AAAAAGCAAAGCAAAACAAAACCATTTGACAGGTTGGGACCTCGGAGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCAAAGCAAAACAAAACCATTTGACAGGTTGGGACCTCGGAGCTG  350

seq1  GAGAAGGGAGTAAAGGCAGCCGCTGCTACACAAATTCTCAACCTAGGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGGAGTAAAGGCAGCCGCTGCTACACAAATTCTCAACCTAGGCAT  400

seq1  GGAGATTTGTCCATCCTGTTCTGCTCAGGCGCCATCACATGTCTCTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATTTGTCCATCCTGTTCTGCTCAGGCGCCATCACATGTCTCTGTGT  450

seq1  TCTAGTTTGCTTTCTGTTGCTGTGATGGAGATCATGGACAGAAGCCGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTTTGCTTTCTGTTGCTGTGATGGAGATCATGGACAGAAGCCGCTT  500

seq1  GGGGAGGAAAGGGTTAATTTCATCTCACAACTCCAGATTGTAGTCCATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGAAAGGGTTAATTTCATCTCACAACTCCAGATTGTAGTCCATCA  550

seq1  CTGAGCAAGCCAAGGCAGGAGCTGGAGGCAGGAACCAAGCAGACTATGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCAAGCCAAGGCAGGAGCTGGAGGCAGGAACCAAGCAGACTATGAA  600

seq1  GGCACACTAGTTATTGACCTACTTCCTGTGACTTGTTCAGCCCACTTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACACTAGTTATTGACCTACTTCCTGTGACTTGTTCAGCCCACTTTCT  650

seq1  TATACAACCTAGGCCAACCTGTCTAGGAGTGGAACTGTATAATGAGCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAACCTAGGCCAACCTGTCTAGGAGTGGAACTGTATAATGAGCCAA  700

seq1  ACCGTTCTGTATCAGTCATCAATCAAACATTCTCCCGCCCCCACCCCCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTTCTGTATCAGTCATCAATCAAACATTCTCCCGCCCCCACCCCCAC  750

seq1  AGGCTTGCCTACAGCATATTCTAATAGAGCTATTTCCTCATTTGAGACTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTGCCTACAGCATATTCTAATAGAGCTATTTCCTCATTTGAGACTC  800

seq1  TCTCTTGTAAGATGAACCTTAGCTTGTGTCAAGGTGACAGAAATCTAACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGTAAGATGAACCTTAGCTTGTGTCAAGGTGACAGAAATCTAACC  850

seq1  GGCAGTCTGTCGGTCTACTTGGCCATTGAGGTAAGACGTAAAGTTCTTAC  900
      |||||||||||||||||||||| ||||||||| |||||||||||||||||
seq2  GGCAGTCTGTCGGTCTACTTGGGCATTGAGGT-AGACGTAAAGTTCTTAC  899

seq1  ACAGATGCTGTTGTAAGCGAGCATCACCCTCCCCACCTGCTGCTGGCTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGCTGTTGTAAGCGAGCATCACCCTCCCCACCTGCTGCTGGCTGA  949

seq1  GCTGCGGGTTGCCTGTTTTAGGACCTTCTGCCTAGCCTCCTTCAGGCACA  1000
      ||||||||||||||||||   ||||||||| |||| || ||||| |||||
seq2  GCTGCGGGTTGCCTGTTT--AGACCTTCTG-CTAG-CTTCTTCA-GCACA  994

seq1  CAAAACCAGCTCAGATCCAGGAGACCACATTCTTTCAGAGCCCTGATCTG  1050
      ||||  |||||||||| ||||||| |||||||||||||||||||||| ||
seq2  CAAA--CAGCTCAGAT-CAGGAGA-CACATTCTTTCAGAGCCCTGATTTG  1040

seq1  CTCTTGACCCAATGACGTCAGTCTC-TCAGAACCACCTTGGAACCTTAG-  1098
      ||| |||||  |||||||||||||| |||| |||| ||||| ||  ||| 
seq2  CTC-TGACC--ATGACGTCAGTCTCTTCAG-ACCA-CTTGGGAC--TAGC  1083

seq1  CTCTAATCTAGAGCTAATTTAGGGATCAAGGGTGCTCCGGGGGCTCTAGT  1148
      |||| ||||| |||||  ||| |||||||||||| |||  || |||||||
seq2  CTCT-ATCTAAAGCTA--TTAAGGATCAAGGGTG-TCC--GGACTCTAGT  1127

seq1  GTCCTCCCCTCTTGTTAGTCAGTCAGCTTCCAGCCACAGAGACCAACCCA  1198
      || || ||||||||||||||||||| | ||  |||| | | | ||     
seq2  GT-CTTCCCTCTTGTTAGTCAGTCA-CGTCAGGCCAGACATATCA-----  1170

seq1  ACCCAACCAGTCAGCTTACCTCCCCATCAGTGCTACTGAATAAGTGTGTG  1248
                 |  | || ||||     |  ||||||||||    |||||
seq2  -----------CGTCCTA-CTCC----TATGGCTACTGAAT---GGTGTG  1201

seq1  CCATCATCCACTCTGATCTAGCACG  1273
      |  |||  | || ||  ||||||||
seq2  CATTCA--CTCTGTGTACTAGCACG  1224

seq1: chr15_27675596_27675785
seq2: B6Ng01-132G14.g_71_260 (reverse)

seq1  GCCCCCCCCCCCCCCCAGAGTAGGGTGATAAGTGTGCACAGGCCACCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCCCCCCCCCCCCAGAGTAGGGTGATAAGTGTGCACAGGCCACCCAG  50

seq1  CCAGTGACAGGGAGGCGGGGCTCTGGCTGACTCTAATGCGTGCTCATGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGACAGGGAGGCGGGGCTCTGGCTGACTCTAATGCGTGCTCATGGT  100

seq1  GGTGGGAGGGAAAGTCTATCAGTGGCCCAGCCGACAGGGTCACCCAGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGAGGGAAAGTCTATCAGTGGCCCAGCCGACAGGGTCACCCAGTCA  150

seq1  GCTCGGGGCCATCTGTTTGCACCCTGCCCTGACCTCAGCA  190
      ||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGGGGCCATCTGTTTGCACCCTGCCCTGACCTCAGCA  190