BAC Information

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BAC

Clone NameB6Ng01-132P08
Chromosome15 (Build37)
Map Location 9,869,374 - 9,870,539
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382969, LOC100039619, Ranbp3l, 1110020G09Rik, Skp2, Lmbrd2, LOC666503, Ugt3a1, LOC100039661, Ugt3a2, LOC383094, Capsl, Il7r, C230086A09Rik
Downstream genePrlr, Agxt2, 4930461P20Rik, Bxdc2, Rad1, 4930401A09Rik, EG666579, Rai14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132P08.bB6Ng01-132P08.g
ACCDH933633DH933634
length1,170153
definitionDH933633|Mus musculus domesticus DNA, BAC clone: B6Ng01-132P08, 5' end.DH933634|Mus musculus domesticus DNA, BAC clone: B6Ng01-132P08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacttctttctcttcttgctcttgactgtgggtgtgaccagcggc
tgcatgttcctgccgcttgagtatcccattatggactataacatggagtc
atgaactaaaccaagctatctttcccaataaatcgcttttgaccatggta
tttttaacacagcaagagaattgacagtaggtgaatctgctagatgagta
tatcagaaatgttgtgctttccggaagaaatgaccctcaactttccgtgg
ctttaggtagccaacctctgtcctccctgtgtcttacctctcagttttgc
tggtcctctatagggagcaatcatgtttaaactctggagggcatccaggg
aagtgatttgagcaaatgacgggaaccagactagagatactacgcactgg
tccaacacagtttttaatgctgttggtgtttccatgacctggaaatgcta
ccgttcaaaatggcctacacatatgaatggactagagaaactctaagcac
atggaatgctttcgtttgataatttctaacaattagggaagcagtggcaa
agaaagacctgtggtgaaaaataacctggtctttctggagatctcttgtc
ctgaattatcctcattcctatgctcatacatgtcagatattaataccttt
ctctctctctccctctttctttctttctgtcttgctttctttctttcttt
ctttctttcttctctctctctctctctctctctctctctttctttctttc
ttcctttccatgtatgcagagtacttagtgcagaataggcactaaacagg
ccattttttttcatgaatcagttagctagaagcttactgaatgaggtaat
ttatagagtattttcagtatttttagtggaatgcattgctgggtctttgg
ctaaaatattaatactatatcatatgtatagtattattaattgaagtagt
attacataatttcccttttccttcctcctgtcctcccagttacccctccc
tgacatctttccataccctcccattctcaacttgaaaggtggtagcagtt
tttctttggatataatattcaaatacaacaaacacaaccacaacacaaca
atgttgctgtttgtttgggaattttctgaagttgtatatggttcaaggct
gcccactctgtatcagatag
catggccaggaagagggagtaggtgggtttgtgagtagtgggagggagaa
ggggatgggggcttttggaggggataccagttaagggaataatatttgca
ttgaaattttagaatatatctaataaaaacaaactattcaacaactataa
tcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_9869374_9870539
seq2: B6Ng01-132P08.b_49_1218

seq1  GAATTCACTTCTTTCTCTTCTTGCTCTTGACTGTGGGTGTGACCAGCGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTCTTTCTCTTCTTGCTCTTGACTGTGGGTGTGACCAGCGGC  50

seq1  TGCATGTTCCTGCCGCTTGAGTATCCCATTATGGACTATAACATGGAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTTCCTGCCGCTTGAGTATCCCATTATGGACTATAACATGGAGTC  100

seq1  ATGAACTAAACCAAGCTATCTTTCCCAATAAATCGCTTTTGACCATGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTAAACCAAGCTATCTTTCCCAATAAATCGCTTTTGACCATGGTA  150

seq1  TTTTTAACACAGCAAGAGAATTGACAGTAGGTGAATCTGCTAGATGAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAACACAGCAAGAGAATTGACAGTAGGTGAATCTGCTAGATGAGTA  200

seq1  TATCAGAAATGTTGTGCTTTCCGGAAGAAATGACCCTCAACTTTCCGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGAAATGTTGTGCTTTCCGGAAGAAATGACCCTCAACTTTCCGTGG  250

seq1  CTTTAGGTAGCCAACCTCTGTCCTCCCTGTGTCTTACCTCTCAGTTTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGGTAGCCAACCTCTGTCCTCCCTGTGTCTTACCTCTCAGTTTTGC  300

seq1  TGGTCCTCTATAGGGAGCAATCATGTTTAAACTCTGGAGGGCATCCAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCTCTATAGGGAGCAATCATGTTTAAACTCTGGAGGGCATCCAGGG  350

seq1  AAGTGATTTGAGCAAATGACGGGAACCAGACTAGAGATACTACGCACTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGATTTGAGCAAATGACGGGAACCAGACTAGAGATACTACGCACTGG  400

seq1  TCCAACACAGTTTTTAATGCTGTTGGTGTTTCCATGACCTGGAAATGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACACAGTTTTTAATGCTGTTGGTGTTTCCATGACCTGGAAATGCTA  450

seq1  CCGTTCAAAATGGCCTACACATATGAATGGACTAGAGAAACTCTAAGCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTCAAAATGGCCTACACATATGAATGGACTAGAGAAACTCTAAGCAC  500

seq1  ATGGAATGCTTTCGTTTGATAATTTCTAACAATTAGGGAAGCAGTGGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAATGCTTTCGTTTGATAATTTCTAACAATTAGGGAAGCAGTGGCAA  550

seq1  AGAAAGACCTGTGGTGAAAAATAACCTGGTCTTTCTGGAGATCTCTTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGACCTGTGGTGAAAAATAACCTGGTCTTTCTGGAGATCTCTTGTC  600

seq1  CTGAATTATCCTCATTCCTATGCTCATACATGTCAGATATTAATACCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATTATCCTCATTCCTATGCTCATACATGTCAGATATTAATACCTTT  650

seq1  CTCTCTCTCTCCCTCTTTCTTTCTTTCTGTCTTGCTTTCTTTCTTTCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCCCTCTTTCTTTCTTTCTGTCTTGCTTTCTTTCTTTCTTT  700

seq1  CTTTCTTTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTC  750

seq1  TTCCTTTCCATGTATGCAGAGTACTTAGTGCAGAATAGGCACTAAACAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCCATGTATGCAGAGTACTTAGTGCAGAATAGGCACTAAACAGG  800

seq1  CCATTTTTTTTCATGAATCAGTTAGCTAGAAGCTTACTGAATGAGGTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTTTTTCATGAATCAGTTAGCTAGAAGCTTACTGAATGAGGTAAT  850

seq1  TTATAGAGTATTTTCAGTA-TTTTAGTGGAATGCATTGCTGGGTCTTTGG  899
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTATAGAGTATTTTCAGTATTTTTAGTGGAATGCATTGCTGGGTCTTTGG  900

seq1  CTAAAATATTAATACTATATCATATGTATAGTATTATTAATTGAAGTAGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATATTAATACTATATCATATGTATAGTATTATTAATTGAAGTAGT  950

seq1  ATTACATAATTTCCC-TTTCCTTCCTCCTGTCCTCCCAGTTA-CCCTCCC  997
      ||||||||||||||| |||||||||||||||||||||||||| |||||||
seq2  ATTACATAATTTCCCTTTTCCTTCCTCCTGTCCTCCCAGTTACCCCTCCC  1000

seq1  TGAACATCTTTCCATACCCTCCCATTCTCAACTTGAAAGTTGGTAGCAGT  1047
      || |||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TG-ACATCTTTCCATACCCTCCCATTCTCAACTTGAAAGGTGGTAGCAGT  1049

seq1  TTTTCTTTGAATAT-ATATTCAAATACACACACACACACACACACACACA  1096
      ||||||||| |||| ||||||||||||| ||| |||||  |||| |||||
seq2  TTTTCTTTGGATATAATATTCAAATACA-ACAAACACAACCACA-ACACA  1097

seq1  CACATGTTGCTGTT--GTTGGGAAATTTCTGAGTGTGTATA-GGTTCAAG  1143
         |||||||||||   ||||||| |||||||   |||||| ||||||||
seq2  ACAATGTTGCTGTTTGTTTGGGAATTTTCTGAAGTTGTATATGGTTCAAG  1147

seq1  GCTGGCCACTCTGTATCAGATAG  1166
      |||| ||||||||||||||||||
seq2  GCTGCCCACTCTGTATCAGATAG  1170