BAC Information

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BAC

Clone NameB6Ng01-133L06
Chromosome15 (Build37)
Map Location 36,818,929 - 37,033,513
singlet/doubletdoublet
Overlap geneZfp706
Upstream geneVps13b, Cox6c, Rgs22, Fbxo43, 1700074I03Rik, Polr2k, Spag1, Rnf19, LOC670773, EG268795, EG545101, Ankrd46, 4631426E05Rik, Pabpc1, LOC626746, Ywhaz
Downstream geneLOC670911, LOC667492, LOC100041288, Grhl2, Ncald, LOC667498, 4930447A16Rik, LOC100041313, LOC667534, Rrm2b, LOC100041478, Edd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133L06.bB6Ng01-133L06.g
ACCDH934184DH934185
length1,215894
definitionDH934184|Mus musculus domesticus DNA, BAC clone: B6Ng01-133L06, 5' end.DH934185|Mus musculus domesticus DNA, BAC clone: B6Ng01-133L06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,818,929 - 36,820,162)(37,032,991 - 37,033,513)
sequence
gaattctaacctgagtctgaccggagccttggagcctcaaaggcaccctc
tgcagaccaacgagggtcatctcttgctagccttagacaccacctggtgg
cactggtgctgatggtgtgccctgtgactcagtggtcacttttgaacttt
gaaacctatatgaaacttctgaactgtttatggcagacagctaacagctg
cctctgcagggctcctagagcttgctgctcagccagtctagctgaacagg
taacttgcacattcatggaggtgggactgtctcaaaaaataaggcaatgg
aaataaattctccttcactgagatcatctgtctcaataataataataaaa
ataataatcacaataatggagtataagcaaatactcccaacatggctaac
taaaaactaatgtgatgatgtctaccctgcttgcaaatttcctaaaaatt
aacaataggctattgcaaccaaactagactgcagtcaccactggctctag
cccagcccaacatgactgaaactggccccagacagagtactgactctgga
gccagacagccctgaacaggacatttagcacgttccagtttccctttcta
tgtctcctacactcaagacccacttgtacatagggggcccaggctccctg
cactaagacaaaaggcttctcctcagatcagttcagggagcgagatgaga
ctccaccactcgtgactttgtgaagcattttctgtgagtctgtctgtcct
gagaactgggagggactcgggaggctggtgacctgctcacacaaggcccc
cagcctgaacagattggcactgagatagtccactaacagaagagagagac
agatgtgaggcaacactctgggtactcgatccaacaatgctgagaaaggg
ctgggagaaatgatgagttagatcaaaggcctgggcaaggcatcgcgcgc
ctcacagacaggtatgtaccctctaacagaagtcaaacacaataggattt
tcgtaatcccaattcatattaagggttcttttataccctaagagctttgc
tcagaaacaaatgtaagaggaagcctgtaaatgatagaaggagatctatg
attactataaaatgacagcaagggctctcatggtagctgccatgttgctt
agtttggcatgttgctcctggaagtggggatatgattcctcacttattca
tggaactggtggccc
gaattcacgcaggcattcacatacacacatgcaaacgagacagagaagat
acacagtgcggattcctcctcaggctgagggtgaatcaaagaccaagctc
atccaagctgagtgagcagaaacgaggctttggagacttgattaagcgag
cctagggtaacccttccaacagctgggtccccgccattctcaatcctgga
aactgattaaagaccgaaagtcagtccttgatgtggccccttcattcttg
ccccatagcaacagatgttgaaagacagcaggggctcccactgaactcat
cattggctttttttttttttttttttttttttgcttgtttaagttatttg
aagattctctaagtcgattaccctgactcagacctaaagaattttctctg
ccagggcactccagtcgagtcagcctgtcaggcagggatgcctaaaagct
gctcatgaggcaaaaagagtttcaaggaagctctcctcctggagtctgga
gttctcttaattctccattcctgcattagtctagtggatggatccacgtg
ctctctttattataagtgccttttaagattaaattctgacatagctaaag
cctcagtgttccaacagtcctagaacgcccttgagctagacagtgacatt
cagagtagcctctggtattacactatcaataaaagccaagtcgctcccat
atacaggaatttacaatggtttagaaagtagatcgggatgtggttttaga
gtattgcatttttcatgagatgggtagctagatcggaactccctagttag
aaccatgacttgggtgtgaaagcccttgcctaggagtgtaaagacctcac
acctggcttctaagactatagctgaccttagatagagctgactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_36818929_36820162
seq2: B6Ng01-133L06.b_47_1261

seq1  GAATTCTAACCTGAGTCTGACCGGAGCCTTGGAGCCTCAAAGGCACCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAACCTGAGTCTGACCGGAGCCTTGGAGCCTCAAAGGCACCCTC  50

seq1  TGCAGACCAACGAGGGTCATCTCTTGCTAGCCTTAGACACCACCTGGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGACCAACGAGGGTCATCTCTTGCTAGCCTTAGACACCACCTGGTGG  100

seq1  CACTGGTGCTGATGGTGTGCCCTGTGACTCAGTGGTCACTTTTGAACTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGTGCTGATGGTGTGCCCTGTGACTCAGTGGTCACTTTTGAACTTT  150

seq1  GAAACCTATATGAAACTTCTGAACTGTTTATGGCAGACAGCTAACAGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCTATATGAAACTTCTGAACTGTTTATGGCAGACAGCTAACAGCTG  200

seq1  CCTCTGCAGGGCTCCTAGAGCTTGCTGCTCAGCCAGTCTAGCTGAACAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCAGGGCTCCTAGAGCTTGCTGCTCAGCCAGTCTAGCTGAACAGG  250

seq1  TAACTTGCACATTCATGGAGGTGGGACTGTCTCAAAAAATAAGGCAATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTGCACATTCATGGAGGTGGGACTGTCTCAAAAAATAAGGCAATGG  300

seq1  AAATAAATTCTCCTTCACTGAGATCATCTGTCTCAATAATAATAATAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATTCTCCTTCACTGAGATCATCTGTCTCAATAATAATAATAAAA  350

seq1  ATAATAATCACAATAATGGAGTATAAGCAAATACTCCCAACATGGCTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATCACAATAATGGAGTATAAGCAAATACTCCCAACATGGCTAAC  400

seq1  TAAAAACTAATGTGATGATGTCTACCCTGCTTGCAAATTTCCTAAAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACTAATGTGATGATGTCTACCCTGCTTGCAAATTTCCTAAAAATT  450

seq1  AACAATAGGCTATTGCAACCAAACTAGACTGCAGTCACCACTGGCTCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATAGGCTATTGCAACCAAACTAGACTGCAGTCACCACTGGCTCTAG  500

seq1  CCCAGCCCAACATGACTGAAACTGGCCCCAGACAGAGTACTGACTCTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCCCAACATGACTGAAACTGGCCCCAGACAGAGTACTGACTCTGGA  550

seq1  GCCAGACAGCCCTGAACAGGACATTTAGCACGTTCCAGTTTCCCTTTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGACAGCCCTGAACAGGACATTTAGCACGTTCCAGTTTCCCTTTCTA  600

seq1  TGTCTCCTACACTCAAGACCCACTTGTACATAGGGGGCCCAGGCTCCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCTACACTCAAGACCCACTTGTACATAGGGGGCCCAGGCTCCCTG  650

seq1  CACTAAGACAAAAGGCTTCTCCTCAGATCAGTTCAGGGAGCGAGATGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAGACAAAAGGCTTCTCCTCAGATCAGTTCAGGGAGCGAGATGAGA  700

seq1  CTCCACCACTCGTGACTTTGTGAAGCATTTTCTGTGAGTCTGTCTGTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACCACTCGTGACTTTGTGAAGCATTTTCTGTGAGTCTGTCTGTCCT  750

seq1  GAGAACTGGGAGGGACTCGGGAGGCTGGTGACCTGCTCACACAAGGCCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTGGGAGGGACTCGGGAGGCTGGTGACCTGCTCACACAAGGCCCC  800

seq1  CAGCCTGAACAGATTGGCACTGAGATAGTCCACTAACAGAAGAGAGAGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGAACAGATTGGCACTGAGATAGTCCACTAACAGAAGAGAGAGAC  850

seq1  AGATGTGAGGCAACACTCTGGGTACTCGATCCAACAATGCTGAGAAAGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTGAGGCAACACTCTGGGTACTCGATCCAACAATGCTGAGAAAGGG  900

seq1  CTGGGAGAAATGATGAGTTCAGATCAAAGGCCTGGGCAAGGCATCGCGCG  950
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTGGGAGAAATGATGAGTT-AGATCAAAGGCCTGGGCAAGGCATCGCGCG  949

seq1  CCTCACAGACAGGTATGTACCCTCTAACAGAAGGTCAAAACCACAATAGG  1000
      |||||||||||||||||||||||||||||||| ||||||  |||||||||
seq2  CCTCACAGACAGGTATGTACCCTCTAACAGAA-GTCAAA--CACAATAGG  996

seq1  ATTTTCGTAAATCCCAATTCATATTTAGGG-TCTTTTATACCCTAAGAGC  1049
      |||||||| |||||||||||||||| |||| |||||||||||||||||||
seq2  ATTTTCGT-AATCCCAATTCATATTAAGGGTTCTTTTATACCCTAAGAGC  1045

seq1  TTTGCTCCAGATACAAATGTACAGAGAAAGCCTTGTAAATGATAG-ATGA  1098
      |||||| |||| ||||||||| |||| ||||| |||||||||||| | ||
seq2  TTTGCT-CAGAAACAAATGTA-AGAGGAAGCC-TGTAAATGATAGAAGGA  1092

seq1  GATCTATGATTACCTATAAAATGGACAGCAAGGGTCTCTTCATAGTGAAG  1148
      |||||||||||| ||||||||| ||||||||||| ||| |||| ||  ||
seq2  GATCTATGATTA-CTATAAAAT-GACAGCAAGGG-CTC-TCATGGT--AG  1136

seq1  CCTGGCATTGTTGCTTAGTTGGCCATTGTTGCTTCCTGAAAGTGGGG-TA  1197
       ||| || |||||||||||| | || |||||| ||||| |||||||| ||
seq2  -CTGCCA-TGTTGCTTAGTTTGGCA-TGTTGC-TCCTGGAAGTGGGGATA  1182

seq1  TGGTTTCCTCCCATCTATCTCACTGGACTGGTGGCCC  1234
      | | |||||| | | |   |||  | |||||||||||
seq2  T-GATTCCTCACTTAT---TCATGGAACTGGTGGCCC  1215

seq1: chr15_37032991_37033513
seq2: B6Ng01-133L06.g_68_590 (reverse)

seq1  CAGGAATGGAGAATTAAGAGAACTCCAGACTCCAGGAGGAGAGCTTCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATGGAGAATTAAGAGAACTCCAGACTCCAGGAGGAGAGCTTCCTT  50

seq1  GAAACTCTTTTTGCCTCATGAGCAGCTTTTAGGCATCCCTGCCTGACAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTCTTTTTGCCTCATGAGCAGCTTTTAGGCATCCCTGCCTGACAGG  100

seq1  CTGACTCGACTGGAGTGCCCTGGCAGAGAAAATTCTTTAGGTCTGAGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTCGACTGGAGTGCCCTGGCAGAGAAAATTCTTTAGGTCTGAGTCA  150

seq1  GGGTAATCGACTTAGAGAATCTTCAAATAACTTAAACAAGCAAAAAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAATCGACTTAGAGAATCTTCAAATAACTTAAACAAGCAAAAAAAAA  200

seq1  AAAAAAAAAAAAAAAAGCCAATGATGAGTTCAGTGGGAGCCCCTGCTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAGCCAATGATGAGTTCAGTGGGAGCCCCTGCTGTC  250

seq1  TTTCAACATCTGTTGCTATGGGGCAAGAATGAAGGGGCCACATCAAGGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAACATCTGTTGCTATGGGGCAAGAATGAAGGGGCCACATCAAGGAC  300

seq1  TGACTTTCGGTCTTTAATCAGTTTCCAGGATTGAGAATGGCGGGGACCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTCGGTCTTTAATCAGTTTCCAGGATTGAGAATGGCGGGGACCCA  350

seq1  GCTGTTGGAAGGGTTACCCTAGGCTCGCTTAATCAAGTCTCCAAAGCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTGGAAGGGTTACCCTAGGCTCGCTTAATCAAGTCTCCAAAGCCTC  400

seq1  GTTTCTGCTCACTCAGCTTGGATGAGCTTGGTCTTTGATTCACCCTCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGCTCACTCAGCTTGGATGAGCTTGGTCTTTGATTCACCCTCAGC  450

seq1  CTGAGGAGGAATCCGCACTGTGTATCTTCTCTGTCTCGTTTGCATGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGAGGAATCCGCACTGTGTATCTTCTCTGTCTCGTTTGCATGTGTG  500

seq1  TATGTGAATGCCTGCGTGAATTC  523
      |||||||||||||||||||||||
seq2  TATGTGAATGCCTGCGTGAATTC  523