BAC Information

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BAC

Clone NameB6Ng01-135N03
Chromosome15 (Build37)
Map Location 61,770,302 - 61,771,336
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040323
Downstream geneMyc, Pvt1, LOC100040584, H2afy3, LOC100040430
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135N03.bB6Ng01-135N03.g
ACCDH935763DH935764
length7201,047
definitionDH935763|Mus musculus domesticus DNA, BAC clone: B6Ng01-135N03, 5' end.DH935764|Mus musculus domesticus DNA, BAC clone: B6Ng01-135N03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaacagaggaatcttgaatggcacagaagcacttaagaaagat
gttcagcatctttcgtcatccggaaaatgcaaataaaaatgatgaagatt
ctatcttaaaccatcagaactgctaagatcaaaatctcaagtgacagtac
atgttggagaggatttgagaaagaggaacactcctcctggaaagcctaca
cagtcaactaacctgggaccatgggtcctcatagagcttgggccaccaac
cagcaagcatgaaggaggtggacctagaccctctagacatttgtggcaaa
agtgcaacttggtcagcatgtgggtcatctaacaagtggagtgggtagga
gctgtctttgtctctgtttgctgccattggatccctcttccccctctctg
gactgcctgattgggccttagtgagagaggatatgactaatccttctggg
actagatgtcccagggcagggtggtacccaagggagggctccccttatgt
gaggggaaagggggacaataggggaggatttgtaaagataggactgggaa
gagaaaagggagggggctgtgattgggatataaactgaagaaagtaggga
agaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaatt
ttagaacgaatgaaagaaaggaatgaatgaaggaatgaatgatggaaggt
ttgtttttttttagaagcat

gaattcagacattgttttaaatttaaaatccaattttcaaaaggagctat
ttcaaactacttagtggggaacattccccaccttttcaccttttctgaag
tccccccatcagtcagttgtcagaggcttcgactgcctagcctatttgtg
ctgatcccagaccttcgtcccctgctatctggttaggctgcgtgccatgg
ggttggtgcagtgattaactaacccaatggcagtgcgtacccactgggca
gccacactgagaggaggaggccaatttgaggacatataaggaatgacaca
ggaactgagccaagccacctgcagctcaaggttgtcacagaaaaggtgtc
agagcagagctgcagagggtgagaaacctgatagtgcagacatcgagtcc
tgtgtgtccctctgaagtcacaaagctaaggtgcttgggctcatttgcca
agttttaagaacctgacgtctgtggaagtggccatcccttggagagagaa
gccagtgagctcatggagccatttctatctatcaggcctggccgggagca
tacattttcccttgtgatgccttgtgatttccctcctggaagccaatgga
agaagtgtgggagcgaggggaggtctctgagttttctttcagggagagac
ccagtggtgggaatctaggcaagtggacaggtgacaggtgtttaggaaga
catgcttacagagcaagcaggggttggcttgtttttctcatttagaacaa
aaggtcttctttcagggctggagagagggctcagcagttaaaagcactga
ctgttctctcgaatgacctgagttcaaatcccagcaaccacatggtagct
cacaaccatccgcaataagatctaatgctctctctggtgtttctgagaca
gctacagtgtacttacatatataattaataaatctttgggctggagcgag
cagaggttcgacttcagttcccagcaatcaaatgaaggctcacacatctg
cacagctgcagtgtactcggattacataaaataataataaggtttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_61770302_61771336
seq2: B6Ng01-135N03.g_68_1098 (reverse)

seq1  TTTTATGT-ATACGAGTACACTGCAGCTGTGCAGATGGTTGTGAGCCTTC  49
      |||||||| || |||||||||||||||||||||||||  |||||||||||
seq2  TTTTATGTAATCCGAGTACACTGCAGCTGTGCAGATG--TGTGAGCCTTC  48

seq1  ATTTGATTGCTGGGAACTGAAGTCGGAACCTCTGCTCGCTCCAGCCCAAA  99
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATTTGATTGCTGGGAACTGAAGTC-GAACCTCTGCTCGCTCCAGCCCAAA  97

seq1  GATTTATTTATTATTATATGTAAGTACACTGTAGCTGTCTTCAGATACAC  149
      |||||||| |||| ||||||||||||||||||||||||| ||||| ||||
seq2  GATTTATTAATTA-TATATGTAAGTACACTGTAGCTGTC-TCAGAAACAC  145

seq1  CAGAGAGAGCATTAGATCTTATTGCGGATGGTTGTGAGCTACCATGTGGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGAGCATTAGATCTTATTGCGGATGGTTGTGAGCTACCATGTGGT  195

seq1  TGCTGGGATTTGAACTCAGGTCATTCGAGAGAACAGTCAGTGCTTTTAAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGATTTGAACTCAGGTCATTCGAGAGAACAGTCAGTGCTTTTAAC  245

seq1  TGCTGAGCCCTCTCTCCAGCCCTGAAAGAAGACCTTTTGTTCTAAATGAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGCCCTCTCTCCAGCCCTGAAAGAAGACCTTTTGTTCTAAATGAG  295

seq1  AAAAACAAGCCAACCCCTGCTTGCTCTGTAAGCATGTCTTCCTAAACACC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAGCCAACCCCTGCTTGCTCTGTAAGCATGTCTTCCTAAACACC  345

seq1  TGTCACCTGTCCACTTGCCTAGATTCCCACCACTGGGTCTCTCCCTGAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACCTGTCCACTTGCCTAGATTCCCACCACTGGGTCTCTCCCTGAAA  395

seq1  GAAAACTCAGAGACCTCCCCTCGCTCCCACACTTCTTCCATTGGCTTCCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTCAGAGACCTCCCCTCGCTCCCACACTTCTTCCATTGGCTTCCA  445

seq1  GGAGGGAAATCACAAGGCATCACAAGGGAAAATGTATGCTCCCGGCCAGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAAATCACAAGGCATCACAAGGGAAAATGTATGCTCCCGGCCAGG  495

seq1  CCTGATAGATAGAAATGGCTCCATGAGCTCACTGGCTTCTCTCTCCAAGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATAGATAGAAATGGCTCCATGAGCTCACTGGCTTCTCTCTCCAAGG  545

seq1  GATGGCCACTTCCACAGACGTCAGGTTCTTAAAACTTGGCAAATGAGCCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCCACTTCCACAGACGTCAGGTTCTTAAAACTTGGCAAATGAGCCC  595

seq1  AAGCACCTTAGCTTTGTGACTTCAGAGGGACACACAGGACTCGATGTCTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACCTTAGCTTTGTGACTTCAGAGGGACACACAGGACTCGATGTCTG  645

seq1  CACTATCAGGTTTCTCACCCTCTGCAGCTCTGCTCTGACACCTTTTCTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATCAGGTTTCTCACCCTCTGCAGCTCTGCTCTGACACCTTTTCTGT  695

seq1  GACAACCTTGAGCTGCAGGTGGCTTGGCTCAGTTCCTGTGTCATTCCTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACCTTGAGCTGCAGGTGGCTTGGCTCAGTTCCTGTGTCATTCCTTA  745

seq1  TATGTCCTCAAATTGGCCTCCTCCTCTCAGTGTGGCTGCCCAGTGGGTAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCCTCAAATTGGCCTCCTCCTCTCAGTGTGGCTGCCCAGTGGGTAC  795

seq1  GCACTGCCATTGGGTTAGTTAATCACTGCACCAACCCCATGGCACGCAGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGCCATTGGGTTAGTTAATCACTGCACCAACCCCATGGCACGCAGC  845

seq1  CTAACCAGATAGCAGGGGACGAAGGTCTGGGATCAGCACAAATAGGCTAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCAGATAGCAGGGGACGAAGGTCTGGGATCAGCACAAATAGGCTAG  895

seq1  GCAGTCGAAGCCTCTGACAACTGACTGATGGGGGGACTTCAGAAAAGGTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCGAAGCCTCTGACAACTGACTGATGGGGGGACTTCAGAAAAGGTG  945

seq1  AAAAGGTGGGGAATGTTCCCCACTAAGTAGTTTGAAATAGCTCCTTTTGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTGGGGAATGTTCCCCACTAAGTAGTTTGAAATAGCTCCTTTTGA  995

seq1  AAATTGGATTTTAAATTTAAAACAATGTCTGAATTC  1035
      ||||||||||||||||||||||||||||||||||||
seq2  AAATTGGATTTTAAATTTAAAACAATGTCTGAATTC  1031


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