BAC Information

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BAC

Clone NameB6Ng01-136G02
Chromosome15 (Build37)
Map Location 6,160,803 - 6,321,543
singlet/doubletdoublet
Overlap geneDab2
Upstream geneTtc33, Ptger4, LOC100039322, LOC100039308, LOC666291, LOC666319, LOC100039358, LOC666323
Downstream geneC9, LOC100039396, LOC100039412, Fyb, LOC100039453, EG665511, 4921505C17Rik, Osmr, Lifr, Egflam
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136G02.bB6Ng01-136G02.g
ACCDH936166DH936167
length1,0941,122
definitionDH936166|Mus musculus domesticus DNA, BAC clone: B6Ng01-136G02, 5' end.DH936167|Mus musculus domesticus DNA, BAC clone: B6Ng01-136G02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,320,457 - 6,321,543)(6,160,803 - 6,161,949)
sequence
gaattcactatacagaccagactagccttgaaatcacaggactctccctg
cccctgcctcctgagtgctgggattataggcatatgccactactcctggc
gaggttcatggttttaactggtactcacactggaaataaaagcccaggta
gggacaggtgctggtatttgtattggttatatattatgactgtggagttg
ggttagatataccccaaaacatctggcaatgtgaaaatgaaggaagatta
taatctgctcagtactaattttagataatttgttcaagtgttttagcaag
tagataatgtgaacaggttaaaaagagttcctaatatgtttattgacagt
tgtgagccaccatgtggttgctgggaattgatctcaggacctttggaaga
gcagtcagcactcttaaccaccctttacttgtaagcaatacacagaccaa
attactggactatatgccagtgaatacagatacctaattaaacctgggaa
gtgttcacccagaaaacactgtctctttttaagtacatatacacacatgg
aacactgattagatatttttatttttctaatatctgtataattccttata
atatttctctgaacataaatcccaattctctcagcattgacagaattttg
ccaagaagaaaactacaatttttctcaaaattgttcatttgttgttccat
gctactatataaaattgatttaataaagcaagaaacagttaatttcgggg
gatgccattttgggaactactaaacaccagctttgatttacatacaagag
tttactttccctgtggctttatgcctttgggggaggtaggctagggcagg
gaaagaaagcccctatacaagtcagcaagcaaggctgcttgctgttcaaa
ctgtaagcgcttaaggatagtttggaaggtgacattctacaaaaaatact
ttcaattcgtatgagcaagacttgggaacaatcattaatacgacattaat
gctgggtagagcagaaggctgggacatggtgaacatgcgccttctataga
agcaaaccttaaatgagcctggaaatcatagctgtttttcattc
gaattcagtacttaggacgaagatgttgcgatccatctgtgttgctctga
atgatacgagttcatgcctttgcaatgcaccttagaatttcacaaaatct
cagatcaaagtcactgtatctgtaccctttctgcagacacgtgttctcct
ttccatttcataaatatttagagttgttaaagcttgaacaattaaataaa
tatttgtaattaaatataactgtcaaatgtttatattatttcatggtcct
gtcaacaaagttgaattctggcaaataactaataaattcaattttattta
ttttagccattctaattacctgtattgtagaacattcttttcgctcacaa
ttctattcctaatcgtgcctgccactcatgttttctgtgtattttgtaat
ttattttctgatacagctttgagaggaagtgtgctttgcaaatttagctc
gtagcaaaggctagctcatacctggtggctcattttaccatctttacaaa
ctcctctttacagagcaaatgttttaatttgtgggttagaatgctgctca
agggaagtgtgcttgtctaaagctcttaatgcactcaggtactagaataa
acttaatttttcatttacatgaaatccatcttagaaaatgtcagtgctct
caaacagttttgaacctggactcttttctttgaggatttcttttcatttc
tagttataggctctatatttggaattatcatctttcttgagttaattcag
ataagccatgtgaggtagaagatgaattacaacacttttacacatattca
gttaccatggcacctttgctaagaggactcttattatcaagtcattattt
tgactagctgcaaattttatttgaacatatatgtaaggtttaaattcttg
aaatctactgggcctgtagacataggtgtttccttaaatatattagttat
ttatagtcttggtattagtactgtcttaatccatgtttttccctacaaaa
atttcatctctagttaatgtagaatatgtattaatttataccccacaaag
gaaatgtgatggatttgtacaatatcacattgagtgatactatggaaggg
gaaagattcatctcggggttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_6320457_6321543
seq2: B6Ng01-136G02.b_44_1136 (reverse)

seq1  AATG-AAAACAGCTATGATTTCCA-GCTCATTTTAGGTTTGCTTCTAATA  48
      |||| ||||||||||||||||||| |||||||| |||||||||||| |||
seq2  AATGAAAAACAGCTATGATTTCCAGGCTCATTTAAGGTTTGCTTCT-ATA  49

seq1  GAGGCGGCATTGTTCA-CATGTCCAAGCCTTCTGCTCTTACCCAGCATTA  97
      || |  ||| |||||| ||||||| |||||||||||| ||||||||||||
seq2  GAAGGCGCA-TGTTCACCATGTCCCAGCCTTCTGCTC-TACCCAGCATTA  97

seq1  ATGTTGTATAAATG-TTGTT-CCAAGTCTTGCTCATAACGATTG-AAGTA  144
      |||| |||| |||| ||||| ||||||||||||||||   |||| |||||
seq2  ATGTCGTATTAATGATTGTTCCCAAGTCTTGCTCATACGAATTGAAAGTA  147

seq1  -TTTTTGTAGAATGTCACCTTCCAAACTATCCTT-AGCGCTTACAGTTTG  192
       ||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTTTTTGTAGAATGTCACCTTCCAAACTATCCTTAAGCGCTTACAGTTTG  197

seq1  AACAGCAAGCAGCCTTGCTTGCTGACTTGTATAGGGGCTTTCTTTCCCTG  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCAAGCAGCCTTGCTTGCTGACTTGTATAGGGGCTTTCTTTCCCTG  247

seq1  CCCTAGCCTACCTCCCCCAAAGGCATAAAGCCACAGGGAAAGTAAACTCT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGCCTACCTCCCCCAAAGGCATAAAGCCACAGGGAAAGTAAACTCT  297

seq1  TGTATGTAAATCAAAGCTGGTGTTTAGTAGTTCCC-AAATGGCATCCCCC  341
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGTATGTAAATCAAAGCTGGTGTTTAGTAGTTCCCAAAATGGCATCCCCC  347

seq1  GAAATTAACTGTTTCTTGCTTTATTAAATCAATTTTATATAGTAGCATGG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTAACTGTTTCTTGCTTTATTAAATCAATTTTATATAGTAGCATGG  397

seq1  AACAACAAATGAACAATTTTGAGAAAAATTGTAGTTTTCTTCTTGGCAAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAAATGAACAATTTTGAGAAAAATTGTAGTTTTCTTCTTGGCAAA  447

seq1  ATTCTGTCAATGCTGAGAGAATTGGGATTTATGTTCAGAGAAATATTATA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTCAATGCTGAGAGAATTGGGATTTATGTTCAGAGAAATATTATA  497

seq1  AGGAATTATACAGATATTAGAAAAATAAAAATATCTAATCAGTGTTCCAT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTATACAGATATTAGAAAAATAAAAATATCTAATCAGTGTTCCAT  547

seq1  GTGTGTATATGTACTTAAAAAGAGACAGTGTTTTCTGGGTGAACACTTCC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTATATGTACTTAAAAAGAGACAGTGTTTTCTGGGTGAACACTTCC  597

seq1  CAGGTTTAATTAGGTATCTGTATTCACTGGCATATAGTCCAGTAATTTGG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTAATTAGGTATCTGTATTCACTGGCATATAGTCCAGTAATTTGG  647

seq1  TCTGTGTATTGCTTACAAGTAAAGGGTGGTTAAGAGTGCTGACTGCTCTT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTATTGCTTACAAGTAAAGGGTGGTTAAGAGTGCTGACTGCTCTT  697

seq1  CCAAAGGTCCTGAGATCAATTCCCAGCAACCACATGGTGGCTCACAACTG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGGTCCTGAGATCAATTCCCAGCAACCACATGGTGGCTCACAACTG  747

seq1  TCAATAAACATATTAGGAACTCTTTTTAACCTGTTCACATTATCTACTTG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAAACATATTAGGAACTCTTTTTAACCTGTTCACATTATCTACTTG  797

seq1  CTAAAACACTTGAACAAATTATCTAAAATTAGTACTGAGCAGATTATAAT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACACTTGAACAAATTATCTAAAATTAGTACTGAGCAGATTATAAT  847

seq1  CTTCCTTCATTTTCACATTGCCAGATGTTTTGGGGTATATCTAACCCAAC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCATTTTCACATTGCCAGATGTTTTGGGGTATATCTAACCCAAC  897

seq1  TCCACAGTCATAATATATAACCAATACAAATACCAGCACCTGTCCCTACC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAGTCATAATATATAACCAATACAAATACCAGCACCTGTCCCTACC  947

seq1  TGGGCTTTTATTTCCAGTGTGAGTACCAGTTAAAACCATGAACCTCGCCA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTTTTATTTCCAGTGTGAGTACCAGTTAAAACCATGAACCTCGCCA  997

seq1  GGAGTAGTGGCATATGCCTATAATCCCAGCACTCAGGAGGCAGGGGCAGG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTAGTGGCATATGCCTATAATCCCAGCACTCAGGAGGCAGGGGCAGG  1047

seq1  GAGAGTCCTGTGATTTCAAGGCTAGTCTGGTCTGTATAGTGAATTC  1087
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTCCTGTGATTTCAAGGCTAGTCTGGTCTGTATAGTGAATTC  1093

seq1: chr15_6160803_6161949
seq2: B6Ng01-136G02.g_67_1188

seq1  GAATTCAGTACTTAGGACGAAGATGTTGCGATCCATCTGTGTTGCTCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTACTTAGGACGAAGATGTTGCGATCCATCTGTGTTGCTCTGA  50

seq1  ATGATACGAGTTCATGCCTTTGCAATGCACCTTAGAATTTCACAAAATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATACGAGTTCATGCCTTTGCAATGCACCTTAGAATTTCACAAAATCT  100

seq1  CAGATCAAAGTCACTGTATCTGTACCCTTTCTGCAGACACGTGTTCTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCAAAGTCACTGTATCTGTACCCTTTCTGCAGACACGTGTTCTCCT  150

seq1  TTCCATTTCATAAATATTTAGAGTTGTTAAAGCTTGAACAATTAAATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTCATAAATATTTAGAGTTGTTAAAGCTTGAACAATTAAATAAA  200

seq1  TATTTGTAATTAAATATAACTGTCAAATGTTTATATTATTTCATGGTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTAATTAAATATAACTGTCAAATGTTTATATTATTTCATGGTCCT  250

seq1  GTCAACAAAGTTGAATTCTGGCAAATAACTAATAAATTCAATTTTATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACAAAGTTGAATTCTGGCAAATAACTAATAAATTCAATTTTATTTA  300

seq1  TTTTAGCCATTCTAATTACCTGTATTGTAGAACATTCTTTTCGCTCACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGCCATTCTAATTACCTGTATTGTAGAACATTCTTTTCGCTCACAA  350

seq1  TTCTATTCCTAATCGTGCCTGCCACTCATGTTTTCTGTGTATTTTGTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTCCTAATCGTGCCTGCCACTCATGTTTTCTGTGTATTTTGTAAT  400

seq1  TTATTTTCTGATACAGCTTTGAGAGGAAGTGTGCTTTGCAAATTTAGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCTGATACAGCTTTGAGAGGAAGTGTGCTTTGCAAATTTAGCTC  450

seq1  GTAGCAAAGGCTAGCTCATACCTGGTGGCTCATTTTACCATCTTTACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAAAGGCTAGCTCATACCTGGTGGCTCATTTTACCATCTTTACAAA  500

seq1  CTCCTCTTTACAGAGCAAATGTTTTAATTTGTGGGTTAGAATGCTGCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTTTACAGAGCAAATGTTTTAATTTGTGGGTTAGAATGCTGCTCA  550

seq1  AGGGAAGTGTGCTTGTCTAAAGCTCTTAATGCACTCAGGTACTAGAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGTGTGCTTGTCTAAAGCTCTTAATGCACTCAGGTACTAGAATAA  600

seq1  ACTTAATTTTTCATTTACATGAAATCCATCTTAGAAAATGTCAGTGCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAATTTTTCATTTACATGAAATCCATCTTAGAAAATGTCAGTGCTCT  650

seq1  CAAACAGTTTTGAACCTGGACTCTTTTCTTTGAGGATTTCTTTTCATTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGTTTTGAACCTGGACTCTTTTCTTTGAGGATTTCTTTTCATTTC  700

seq1  TAGTTATAGGCTCTATATTTGGAATTATCATCTTTCTTGAGTTAATTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTATAGGCTCTATATTTGGAATTATCATCTTTCTTGAGTTAATTCAG  750

seq1  ATAAGCCATGTGAGGTAGAAGATGAATTACAACACTTTTACACATATTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCCATGTGAGGTAGAAGATGAATTACAACACTTTTACACATATTCA  800

seq1  GTTACCATGGCACCTTTGCTAAGAGGACTCTTATTATCAAGTCATTATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCATGGCACCTTTGCTAAGAGGACTCTTATTATCAAGTCATTATTT  850

seq1  TGACTAGCTGCAAAATTTTATTTGAACATATATGTAAGGTTTAAATTC-T  899
      ||||||||||| |||||||||||||||||||||||||||||||||||| |
seq2  TGACTAGCTGC-AAATTTTATTTGAACATATATGTAAGGTTTAAATTCTT  899

seq1  GAAATCTACTGGGCCTGTAGACATAGGTGTTTCCTTAAATATATTAGTTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCTACTGGGCCTGTAGACATAGGTGTTTCCTTAAATATATTAGTTA  949

seq1  TTTTATAGTCTTGGTATTAAGTACTGTCTTAATCCCATGTTTTTCCCTTA  999
       ||||||||||||||||| |||||||||||||| ||||||||||||| ||
seq2  -TTTATAGTCTTGGTATT-AGTACTGTCTTAAT-CCATGTTTTTCCC-TA  995

seq1  CAAAAATTTCATCTCCTAGTAAATTGTAGATATATGTTATTAATTTATAC  1049
      |||||||||||||| ||||| || |||||| ||||| |||||||||||| 
seq2  CAAAAATTTCATCT-CTAGTTAA-TGTAGA-ATATG-TATTAATTTATA-  1040

seq1  CCCCACAAAAGGAAAATGTTGATGGTATTTGTACAAATACCACATTGAAG  1099
      |||||||||  | ||||| |||||| |||||||| |||| ||||||||  
seq2  CCCCACAAA--GGAAATG-TGATGG-ATTTGTAC-AATATCACATTGA--  1083

seq1  TTGTATCACTATGGGAAAGGGAGAAAAGTATTTCATCTCGGGAGTTAT  1147
        ||   |||||||  |||||  || |    ||||||||||| |||||
seq2  --GTGATACTATGG--AAGGGGAAAGA----TTCATCTCGGG-GTTAT  1122