BAC Information

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BAC

Clone NameB6Ng01-136K03
Chromosome15 (Build37)
Map Location 68,917,591 - 69,054,064
singlet/doubletdoublet
Overlap geneKhdrbs3
Upstream geneZfat1, LOC100041000, EG665945, EG633752
Downstream geneLOC383050
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136K03.bB6Ng01-136K03.g
ACCDH936356DH936357
length965966
definitionDH936356|Mus musculus domesticus DNA, BAC clone: B6Ng01-136K03, 5' end.DH936357|Mus musculus domesticus DNA, BAC clone: B6Ng01-136K03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,053,491 - 69,054,064)(68,917,591 - 68,918,554)
sequence
gaattcatttgaatggagttgacatgtggtcagctgagtacatagatggg
aatgaagtcaagacaaagggaacaagacatacagatccccaggtctggct
tcctggccatctgcttctcaataagaatggatagaaaaataaatgcaaca
gctagtgaactggaaggaacatggctactgcctcataaagctacagaaag
gtctaacaactaaaccttttacctctggctttcacttcctagcacaacac
ttctccagcccttgaaattgcagagtgctaccaatatcttttgtgaaata
gatagtgagaggccccttgatattttcagagtgaaggctggtcactggaa
aacacagagcatgattagagggttggacgttttagctctactacccaacc
ttctcagaagggagaatggctgaaggtttagattaacaatgctcaacaat
atatttcatcatgcctatcctatctaggaaagtttctgtaaactctcaca
aggatcaagttgggagatcttttagctataagaacataaaggttcctgga
ggatggagacctgaggggaaggatccatgaaagctcccgatcctttccat
actcaccctgtgcatgttgttgtctgaatacttctctgtataatgtatgg
cattcataagaacttgctaagtccaaataaggtttgtcccaagatttgtg
aactatgctatcaaactatatcaaccagcgtagttatatggcagctgagc
tgtaactggctaactgatcagaagcacagctttctaagtttaacaattgt
ctgaaatgggggggggggctagtttgtatgcatgaacccccaccctgtag
gacttgatgctatattcatgtaataagtgccagaattgagttcatgttag
gatagccagctgtgtcccagaagaactgggtgtgtatgtggaaaaatacc
tcacactcatgctga
gaattctgaggacctccagagggaagcattacatatacagaccatgaaac
cagtagacctcagggttggtgatctgctgggagatgttgtgcatatatgt
taggggacatggtgctactgcagagattgtttgccgttcctcccagcttg
ggcttcaggccgtggacacgtagagaactatgggaaagagctgccccagt
ttccccttgtgaagagtttcagagactgagctgggggaaggatgaggtgg
ttgaggcctgctgcaggggcatgtcaacgttgagggcttcctttgctgat
acaaatagaagagtttagtaagattggctcagtgactctaaagtagaaat
gagcagaaagatctaactgccaggtctaaggacagaggaagtgactgtca
agcattccttcttcactcagggtgatctgggaatggggccttggcctttt
ggagtctatgtccactgcatgctccgcctgcttacgtctggaaggaggag
agaggccatgagatattccagctggtgccctcaactccctcagaagaggt
cagagaatcatgccatcttgtagtattcaggctcatttgttgatgtggat
gatggaagcaagaaacgttctaaaagttttaagcatgagcgagctcattc
ctagtgaactgagaaaaggaagtaggtatagtggatggagctgttgtgaa
cttgcccatcatccccttactggtgccttctccaggcaggacctatgctg
agagtctgagatcacatcactgggagcaggaggggagagagaggtctggg
gaggtgactaggagaaagcccactcctaacttctggggtacggggaggca
ctaatcctgtaccttctctgatgaagcgtggactgtaagcctccccgggg
ttgttagtttgtttgtcctggttttatttctgttagttttattaaaatgg
aatgctgggcccttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_69053491_69054064
seq2: B6Ng01-136K03.b_50_623 (reverse)

seq1  ATCCTTCCCCTCAGGTCTCCATCCTCCAGGAACCTTTATGTTCTTATAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTCCCCTCAGGTCTCCATCCTCCAGGAACCTTTATGTTCTTATAGC  50

seq1  TAAAAGATCTCCCAACTTGATCCTTGTGAGAGTTTACAGAAACTTTCCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGATCTCCCAACTTGATCCTTGTGAGAGTTTACAGAAACTTTCCTA  100

seq1  GATAGGATAGGCATGATGAAATATATTGTTGAGCATTGTTAATCTAAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGATAGGCATGATGAAATATATTGTTGAGCATTGTTAATCTAAACC  150

seq1  TTCAGCCATTCTCCCTTCTGAGAAGGTTGGGTAGTAGAGCTAAAACGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCCATTCTCCCTTCTGAGAAGGTTGGGTAGTAGAGCTAAAACGTCC  200

seq1  AACCCTCTAATCATGCTCTGTGTTTTCCAGTGACCAGCCTTCACTCTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTCTAATCATGCTCTGTGTTTTCCAGTGACCAGCCTTCACTCTGAA  250

seq1  AATATCAAGGGGCCTCTCACTATCTATTTCACAAAAGATATTGGTAGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCAAGGGGCCTCTCACTATCTATTTCACAAAAGATATTGGTAGCAC  300

seq1  TCTGCAATTTCAAGGGCTGGAGAAGTGTTGTGCTAGGAAGTGAAAGCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAATTTCAAGGGCTGGAGAAGTGTTGTGCTAGGAAGTGAAAGCCAG  350

seq1  AGGTAAAAGGTTTAGTTGTTAGACCTTTCTGTAGCTTTATGAGGCAGTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAAAGGTTTAGTTGTTAGACCTTTCTGTAGCTTTATGAGGCAGTAG  400

seq1  CCATGTTCCTTCCAGTTCACTAGCTGTTGCATTTATTTTTCTATCCATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTTCCTTCCAGTTCACTAGCTGTTGCATTTATTTTTCTATCCATTC  450

seq1  TTATTGAGAAGCAGATGGCCAGGAAGCCAGACCTGGGGATCTGTATGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGAGAAGCAGATGGCCAGGAAGCCAGACCTGGGGATCTGTATGTCT  500

seq1  TGTTCCCTTTGTCTTGACTTCATTCCCATCTATGTACTCAGCTGACCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCTTTGTCTTGACTTCATTCCCATCTATGTACTCAGCTGACCACA  550

seq1  TGTCAACTCCATTCAAATGAATTC  574
      ||||||||||||||||||||||||
seq2  TGTCAACTCCATTCAAATGAATTC  574

seq1: chr15_68917591_68918554
seq2: B6Ng01-136K03.g_66_1031

seq1  GAATTCTGAGGACCTCCAGAGGGAAGCATTACATATACAGACCATGAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGGACCTCCAGAGGGAAGCATTACATATACAGACCATGAAAC  50

seq1  CAGTAGACCTCAGGGTTGGTGATCTGCTGGGAGATGTTGTGCATATATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGACCTCAGGGTTGGTGATCTGCTGGGAGATGTTGTGCATATATGT  100

seq1  TAGGGGACATGGTGCTACTGCAGAGATTGTTTGCCGTTCCTCCCAGCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGACATGGTGCTACTGCAGAGATTGTTTGCCGTTCCTCCCAGCTTG  150

seq1  GGCTTCAGGCCGTGGACACGTAGAGAACTATGGGAAAGAGCTGCCCCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCAGGCCGTGGACACGTAGAGAACTATGGGAAAGAGCTGCCCCAGT  200

seq1  TTCCCCTTGTGAAGAGTTTCAGAGACTGAGCTGGGGGAAGGATGAGGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTTGTGAAGAGTTTCAGAGACTGAGCTGGGGGAAGGATGAGGTGG  250

seq1  TTGAGGCCTGCTGCAGGGGCATGTCAACGTTGAGGGCTTCCTTTGCTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGCCTGCTGCAGGGGCATGTCAACGTTGAGGGCTTCCTTTGCTGAT  300

seq1  ACAAATAGAAGAGTTTAGTAAGATTGGCTCAGTGACTCTAAAGTAGAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATAGAAGAGTTTAGTAAGATTGGCTCAGTGACTCTAAAGTAGAAAT  350

seq1  GAGCAGAAAGATCTAACTGCCAGGTCTAAGGACAGAGGAAGTGACTGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGAAAGATCTAACTGCCAGGTCTAAGGACAGAGGAAGTGACTGTCA  400

seq1  AGCATTCCTTCTTCACTCAGGGTGATCTGGGAATGGGGCCTTGGCCTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCCTTCTTCACTCAGGGTGATCTGGGAATGGGGCCTTGGCCTTTT  450

seq1  GGAGTCTATGTCCACTGCATGCTCCGCCTGCTTACGTCTGGAAGGAGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCTATGTCCACTGCATGCTCCGCCTGCTTACGTCTGGAAGGAGGAG  500

seq1  AGAGGCCATGAGATATTCCAGCTGGTGCCCTCAACTCCCTCAGAAGAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCCATGAGATATTCCAGCTGGTGCCCTCAACTCCCTCAGAAGAGGT  550

seq1  CAGAGAATCATGCCATCTTGTAGTATTCAGGCTCATTTGTTGATGTGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAATCATGCCATCTTGTAGTATTCAGGCTCATTTGTTGATGTGGAT  600

seq1  GATGGAAGCAAGAAACGTTCTAAAAGTTTTAAGCATGAGCGAGCTCATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAAGCAAGAAACGTTCTAAAAGTTTTAAGCATGAGCGAGCTCATTC  650

seq1  CTAGTGAACTGAGAAAAGGAAGTAGGTATAGTGGATGGAGCTGTTGTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGAACTGAGAAAAGGAAGTAGGTATAGTGGATGGAGCTGTTGTGAA  700

seq1  CTTGCCCATCATCCCCTTACTGGTGCCTTCTCCAGGCAGGACCTATGCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCCATCATCCCCTTACTGGTGCCTTCTCCAGGCAGGACCTATGCTG  750

seq1  AGAGTCTGAGATCACATCACTGGGAGCAGGAGGGGAGAGAGAGGTCTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTGAGATCACATCACTGGGAGCAGGAGGGGAGAGAGAGGTCTGGG  800

seq1  GAGGTGACTAGGAG-AAGCCCACTCCTAACTTCT-GGGTAC-GGGAGGCA  847
      |||||||||||||| ||||||||||||||||||| |||||| ||||||||
seq2  GAGGTGACTAGGAGAAAGCCCACTCCTAACTTCTGGGGTACGGGGAGGCA  850

seq1  CTAA-CCTGTACCTTCTCTGATGGAGCGTGGACTGTAAAGCCT-CACGGG  895
      |||| |||||||||||||||||| |||||||||||| |||||| | ||||
seq2  CTAATCCTGTACCTTCTCTGATGAAGCGTGGACTGT-AAGCCTCCCCGGG  899

seq1  GTTGTTTGTTTGTTTGTCTTGGTTTTTTTTTCTGTTTGTTTTTATTAATA  945
      |||||| ||||||||||| ||| |||| |||||||| | ||||||||| |
seq2  GTTGTTAGTTTGTTTGTCCTGG-TTTTATTTCTGTTAG-TTTTATTAAAA  947

seq1  TTGTATGCTGGGCCTTTAA  964
      | | |||||||||| ||||
seq2  TGGAATGCTGGGCCCTTAA  966