BAC Information

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BAC

Clone NameB6Ng01-137C19
Chromosome15 (Build37)
Map Location 74,991,225 - 74,992,186
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040984, Bai1, 1700016M24Rik, Arc, Jrk, 4933427E11Rik, Psca, 4930572J05Rik, Slurp1, Lypd2, 2300005B03Rik, Lynx1, Ly6d, D730001G18Rik, Ly6k, Gml, Hemt1, Cyp11b1, Cyp11b2, 2010109I03Rik, LOC625653, Ly6e, Ly6i, LOC666240, LOC100041528, Ly6a, Ly6c, LOC546642, EG625737, LOC100041546, I830127L07Rik, LOC100041070, LOC546644
Downstream geneLOC100041087, BC025446, LOC100041092, Ly6f, LOC100041652, LOC100041107, 9030619P08Rik, Ly6h, Gpihbp1, Zfp41, 2810039B14Rik, Top1mt, Rhpn1, Mafa, Zc3h3, LOC672572, Gsdmdc1, Naprt1, Eef1d, Tigd5, Pycrl, Tsta3, Zfp623, Eif2s3x-ps1, Zfp707, 2410075B13Rik, Mapk15, AA409316, K230010J24Rik, Scrib, 2410104I19Rik, Nrbp2, Eppk1, BC024139
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137C19.bB6Ng01-137C19.g
ACCDH936759DH936760
length9531,217
definitionDH936759|Mus musculus domesticus DNA, BAC clone: B6Ng01-137C19, 5' end.DH936760|Mus musculus domesticus DNA, BAC clone: B6Ng01-137C19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgtccaactgtttgaagcagacacaattaatcatagccagaga
attgtgagcagtatgaggctatgtttgtctagcagccacatgggtcaggt
ctcactagtccctaaggcccgtgctatgatctgactgtctgagataaaac
aaaatctagtaacagatattaaacatctctccaggtatcaagacctgaaa
agggtgaatacctttgaacttctaaatgcatttctttctcagaacctaag
aaatgaatctgtgaaagaaccacaaggtatgtacactagagaaactctgt
gtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtctgt
gtgtgtctgtgtgtctgtgtctgtgtgtctgtgtctgtgtgtgtgtgtgt
atactccaaagcaggatctatgtttgtcccagggaagaaggttgcaggga
caagggctttaatggttgagagatagacacataggcatctcttatacttg
aggagctctgatgctttccctagctttaattgcatctacccactcagctg
catcacagttattcatatgcacagcacacaattaaaaaaaaacttttatt
gattcttccctgggtaactgtgaatttcccagcatgcacttcaattccac
tcatatccccatccctccctagtcatcctataccctttgcaaactccccc
tcaaaaagacaaaataaaataaaataaaataaaataaataaaataaaata
aaaggaaaaacatctgggcatggtagctggagtcgggaacagtataacac
acctttgttcaaacaactttactaacagatgattacaataattattctct
caattggagacctctggcttctaaaacatatcatactggatatgtccaga
atccactctgatgttgttgtttgttcatggaaatgctgaagctttgatct
gca
gaattcctcctgtaggggccagagagaataaaacagggcgtcccccaatt
tctctctgtccctgggagaattctaaaatccgttttcttttatcctttct
tttcctttcctgcttataagagacaggttgtcaaaccaagattcaaatcc
aaaattttctaacagcttctggcaagcatccaaacttctgatttatttaa
tctgagggcaaatttttgagaaaacaatctctatacaccaaatgtctcaa
gtagcctaaaagtttaccatgctgaatctttttgaagccatcatcagtcc
acacttagtcatatattttgtagccatctgcaaaaacgctattttctgca
accaacaaaaataccatttatggaataaattatatatgttctaggagatg
acttaactttcaataaagccttttctactaattttaagcacaatgtagga
ttgggaaattataaataaggtaacggtaagaagtgacctatattttgact
tttatgaagtctctttttatactttgaccataatttgaccataactttaa
ttttacctaaagtatcagaatccacaacttgaagttttttcttataactg
gagctgtgttctataatgagctccacagtttctgaacagggctaagagac
tgcccctttagttttttgccttacctgcttcttagtgagcagagtcccat
ccttatgggactttgatttacattcacttctccagtgcttttcacaacgc
tgggaaggacccaaaggaatgctcttcttgtctcctgagagatttttaca
atctttcctcacgtgccctggttttttacaaccgaaacatgtaatttcac
acgtagcgccgaatttcttcccttttcttgctgtggcgtaagctaattcc
tgcattacggctggtgaggcatctacacatgctttaatataatctttcag
gacttgtcttatgattgtctgttcagtctgcacagtattcacgtatccaa
gccaattgtttatatatatcagtccctcgagggggagcatctaaaactgc
tcttcaatctagcccaaactcctcgtaagatcatcatgctttgtctattc
ctgaggactgtgatagcccagtggaggtaactcgcacgctgaatacgcta
ctgacattttccacactgcttggaaattacgagtggcttcgtctatagca
catagctcttctgacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_74991225_74992186
seq2: B6Ng01-137C19.b_43_995 (reverse)

seq1  TGCAGATCCAAAGCTACAGCATTTCCATGAAACAAGACAACAACATCAGA  50
      ||||||| ||||||| ||||||||||||| ||||| ||||||||||||||
seq2  TGCAGAT-CAAAGCTTCAGCATTTCCATG-AACAA-ACAACAACATCAGA  47

seq1  GTGGAATTCTGGGACATATCCAGTATTGATATTGTTTTAGAAGCCAGAGG  100
      |||| ||||| |||||||||||||| ||||| ||||||||||||||||||
seq2  GTGG-ATTCT-GGACATATCCAGTA-TGATA-TGTTTTAGAAGCCAGAGG  93

seq1  TCTCCAA-TGAGAGCAATAATTAATTGTAATCATCTGTTAGTAAAGTTGT  149
      ||||||| |||||| ||||||| |||||||||||||||||||||||||||
seq2  TCTCCAATTGAGAG-AATAATT-ATTGTAATCATCTGTTAGTAAAGTTGT  141

seq1  TTGAACAAAAGGTGTGTTATACTGTTCCCGACTCCAGCTACCATGCCCAG  199
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAC-AAAGGTGTGTTATACTGTTCCCGACTCCAGCTACCATGCCCAG  190

seq1  ATGTTTTTCCTTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTA  249
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATGTTTTTCCTTTTATTTTATTTTA-TTTATTTTATTTTATTTTATTTTA  239

seq1  TTTTGTCTTTTTGAGGGGGAGTTTGC-AAGGGTATAGGATGACTAGGGAG  298
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTTTGTCTTTTTGAGGGGGAGTTTGCAAAGGGTATAGGATGACTAGGGAG  289

seq1  GGATGGGGATATGAGTGGAATTGAAGTGCATGCTGGGAAATTCACAGTTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGGGATATGAGTGGAATTGAAGTGCATGCTGGGAAATTCACAGTTA  339

seq1  CCCAGGGAAGAATCAATAAAAGTTTTTTTTTAATTGTGTGCTGTGCATAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGGAAGAATCAATAAAAGTTTTTTTTTAATTGTGTGCTGTGCATAT  389

seq1  GAATAACTGTGATGCAGCTGAGTGGGTAGATGCAATTAAAGCTAGGGAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAACTGTGATGCAGCTGAGTGGGTAGATGCAATTAAAGCTAGGGAAA  439

seq1  GCATCAGAGCTCCTCAAGTATAAGAGATGCCTATGTGTCTATCTCTCAAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGAGCTCCTCAAGTATAAGAGATGCCTATGTGTCTATCTCTCAAC  489

seq1  CATTAAAGCCCTTGTCCCTGCAACCTTCTTCCCTGGGACAAACATAGATC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAAGCCCTTGTCCCTGCAACCTTCTTCCCTGGGACAAACATAGATC  539

seq1  CTGCTTTGGAGTATACACACACACACACAGACACAGACACACAGACACAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTGGAGTATACACACACACACACAGACACAGACACACAGACACAG  589

seq1  ACACACAGACACACACAGACACACACAGACACACACAGACACACACACAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAGACACACACAGACACACACAGACACACACAGACACACACACAC  639

seq1  ACACACACACACACACAGAGTTTCTCTAGTGTACATACCTTGTGGTTCTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACAGAGTTTCTCTAGTGTACATACCTTGTGGTTCTT  689

seq1  TCACAGATTCATTTCTTAGGTTCTGAGAAAGAAATGCATTTAGAAGTTCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGATTCATTTCTTAGGTTCTGAGAAAGAAATGCATTTAGAAGTTCA  739

seq1  AAGGTATTCACCCTTTTCAGGTCTTGATACCTGGAGAGATGTTTAATATC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTATTCACCCTTTTCAGGTCTTGATACCTGGAGAGATGTTTAATATC  789

seq1  TGTTACTAGATTTTGTTTTATCTCAGACAGTCAGATCATAGCACGGGCCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACTAGATTTTGTTTTATCTCAGACAGTCAGATCATAGCACGGGCCT  839

seq1  TAGGGACTAGTGAGACCTGACCCATGTGGCTGCTAGACAAACATAGCCTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGACTAGTGAGACCTGACCCATGTGGCTGCTAGACAAACATAGCCTC  889

seq1  ATACTGCTCACAATTCTCTGGCTATGATTAATTGTGTCTGCTTCAAACAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGCTCACAATTCTCTGGCTATGATTAATTGTGTCTGCTTCAAACAG  939

seq1  TTGGACAGGAATTC  962
      ||||||||||||||
seq2  TTGGACAGGAATTC  953