BAC Information

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BAC

Clone NameB6Ng01-137D05
Chromosome15 (Build37)
Map Location 27,064,732 - 27,171,740
singlet/doubletdoublet
Overlap genenone
Upstream geneAK162044, Fbxl7, LOC622531, LOC625311
Downstream geneAnk, BC087945, LOC100040622, BC052328, Trio, LOC667126, Dnahc5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137D05.bB6Ng01-137D05.g
ACCDH936777DH936778
length1,1661,184
definitionDH936777|Mus musculus domesticus DNA, BAC clone: B6Ng01-137D05, 5' end.DH936778|Mus musculus domesticus DNA, BAC clone: B6Ng01-137D05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,170,584 - 27,171,740)(27,064,732 - 27,065,915)
sequence
gaattcttccccagtcagcttagcttccaggttgcgtctcaagctcttcc
acaaattccataaaagaaacattattctctgaacaaccaacccaccttgg
tagtatagtgttttatgcttgtgataagaaagtgccagcagttggacttg
tccattttcctcattcgctctgcctgacaggtctcaactatggcaccttt
ctgcaatgtcacctctgagaagcctctaccagattgtaccttttaattac
tacccacaacatgctttcttatttgcatttgaatgccgtccttgtttgtt
tgttgttgtgataaaacactgaccacaaccaacttaggaaggaagggtta
attacgtcttacaggttagagttcatcaacaaaggaaggcaaggcaggaa
ctcgagcaggaacccaggcagaggcagctcctcagttgaagtttcctctt
cccatgtgactgtagtttgtgtcacgttggcgaaaactatattgaatctt
ccagtcattaatcccatgtcgtttgtttgcactcgttaaataattcattt
aaaagacttagcattttagacttctgagaaactgcaaaggtgccctgttg
taaattccctgttgaaggcgagagaggtcaaggtgatttctggaagacct
attcttggccaatttgctgtctgactgtgggatgtgcttaacttttcaag
ccctggtttctacttctaaggaacagaggcaatctgttttcattggaaac
aagataaatggggtcatgcacaccagacacctcaggggtagggcatgtta
gtttggttgtctggtctccgtgattaaatgcctgacagattacaacttag
agaggaaagactttggttatagttttagagggttcagtctgtgattgcct
ggccatctgtgatttaacagaacattgggagcagcacacagggcattttg
actcatgtttgttccagaaaagcataaaagtgtgatgtgatagaaagggg
actagggaccccacaccccctaaatgtcactttctaagtggacttacttt
cctcaggtgggtcccattctcctaatgccttcaaacctttcgagaggttg
gcaccagtcaaggactggaatgtcagaataaagaaacttgtgtgttgtgg
ggggttattcctactc
gaattccttcctttgtctgggagatttttctttttttaatgggaatgaag
ggaaatgaaaaaagctcaggagcagatcgtgaaatgttcaggtccctgag
aactgggattatttgcgtgcagccctggggcatggtgaattgccgagtcc
tggggcacacgatgggcatgctgggcaggctgttgtgtgtatgtttgccg
aagaattaaattgcttttaaagataagccaaatataattccttaagcagt
caatctatcaattacaatccatccacctctctccttaggttgtccagaga
gctctgctggtagtcctgaactaggggcctgggatccagtttgagatagc
acaggtcgggaggaaatgttatgtctgaaaggacatagccctgctctcag
catattcttgaacctctcaacccttgagttcccagttgttgaaacatcca
cattaattcaactgctcagtgggctcttatttataaagatcttgactgtc
cctcttctccaatttctcccattattacaattgcaaaataacaatctctt
taatgaagcaccaattcttacactcttctccctccttacatatcctttcc
atttcttcataactgtgcatctcagctgagcagcgtgcttcgtattacag
agcaaccactgtgaaaacaatggaaactctgccattcttgttccaaacga
actaatttttcatgattctttacttggcttgcagcctctgctagggaatg
tctctctcctttcagcaaggtcagcctctgcatctacactacccatcatc
ttgtaactttatgttcttgtcatttatttctgctttgatctttattttat
atgcatgtttctggggtagtgtatacctatgtgcatttgtatgcctatgt
atgcggagaccagagtttgacaatatctggtgccagttttatttgtccct
gtatatattttggagacagatcacttccactgaaatggacattcaagatc
agctagactgctgagcagtgggcctctctagattcgtctccaccaactgc
acagagattacaggcattgctaccaccgagctcccctacatggcctctaa
agaatcaaagtcactccctcaggctccaccagcccagcatcttcctggag
cctagaggctactctcctcctccattccatattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_27170584_27171740
seq2: B6Ng01-137D05.b_46_1211 (reverse)

seq1  GAGTAGGAAATATACCACCACCAACAACACAAGTTTCTTTA-TCTGACAT  49
      ||||||| |||| ||| ||  |||| ||||||||||||||| ||||||||
seq2  GAGTAGG-AATA-ACCCCCCACAAC-ACACAAGTTTCTTTATTCTGACAT  47

seq1  CACAGTCCCTGGCTGGTGGCACAACTCTCGAAGGGTCTGGAGGCATTAGG  99
        |||||| || |||||| || | |||||||| ||| || ||||||||||
seq2  TCCAGTCCTTGACTGGTGCCA-ACCTCTCGAAAGGTTTGAAGGCATTAGG  96

seq1  AG-ATGGGACCCACCTGGAGAAAGTAGGT-CACTTAG-AAGTGACATTTA  146
      || ||||||||||||||  ||||||| || ||||||| ||||||||||||
seq2  AGAATGGGACCCACCTGAGGAAAGTAAGTCCACTTAGAAAGTGACATTTA  146

seq1  -GGGGTGTGTGGTCCCTAGT-CCCTTTCTATCACATTCACAC-TCTCTGC  193
       |||||||| |||||||||| |||||||||||||| |||||| | | |||
seq2  GGGGGTGTGGGGTCCCTAGTCCCCTTTCTATCACA-TCACACTTTTATGC  195

seq1  -TTTCTGGA--CAACATGGGTC-AAATGGCCTGTTGTGCTGCT-CCAATG  238
       ||||||||   |||||| ||| ||||| |||| ||||||||| ||||||
seq2  TTTTCTGGAACAAACATGAGTCAAAATGCCCTG-TGTGCTGCTCCCAATG  244

seq1  TTCTGTTCAATCACAGATGGCCAGGCAATCACAGACTGAACCCTCTAAAA  288
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTAAATCACAGATGGCCAGGCAATCACAGACTGAACCCTCTAAAA  294

seq1  CTATAACCAAAGTCTTTCCTCTCTTAAGTTGT-ATCTGTCAGGCATTTAA  337
      ||||||||||||||||||||||| |||||||| |||||||||||||||||
seq2  CTATAACCAAAGTCTTTCCTCTC-TAAGTTGTAATCTGTCAGGCATTTAA  343

seq1  TCACGGAGACCAGACAACC-AACTAACATGCCCTACCCCTGAGGTGTCTG  386
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCACGGAGACCAGACAACCAAACTAACATGCCCTACCCCTGAGGTGTCTG  393

seq1  GTGTGCATGACCCCATTTTTCTTGTTTCCAATG-AAACAGATTGCCTCTG  435
      |||||||||||||||||| |||||||||||||| ||||||||||||||||
seq2  GTGTGCATGACCCCATTTATCTTGTTTCCAATGAAAACAGATTGCCTCTG  443

seq1  TTCCTTAGAAGTAGAAACCAGGGCTTGAAAAGTTAAGCACATCCCACAGT  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTAGAAGTAGAAACCAGGGCTTGAAAAGTTAAGCACATCCCACAGT  493

seq1  CAGACAGCAAATTGGCCAAGAATAGGTCTTCCAGAAATCACCTTGACCTC  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGCAAATTGGCCAAGAATAGGTCTTCCAGAAATCACCTTGACCTC  543

seq1  TCTCGCCTTCAACAGGGAATTTACAACAGGGCACCTTTGCAGTTTCTCAG  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGCCTTCAACAGGGAATTTACAACAGGGCACCTTTGCAGTTTCTCAG  593

seq1  AAGTCTAAAATGCTAAGTCTTTTAAATGAATTATTTAACGAGTGCAAACA  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTAAAATGCTAAGTCTTTTAAATGAATTATTTAACGAGTGCAAACA  643

seq1  AACGACATGGGATTAATGACTGGAAGATTCAATATAGTTTTCGCCAACGT  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGACATGGGATTAATGACTGGAAGATTCAATATAGTTTTCGCCAACGT  693

seq1  GACACAAACTACAGTCACATGGGAAGAGGAAACTTCAACTGAGGAGCTGC  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAAACTACAGTCACATGGGAAGAGGAAACTTCAACTGAGGAGCTGC  743

seq1  CTCTGCCTGGGTTCCTGCTCGAGTTCCTGCCTTGCCTTCCTTTGTTGATG  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCTGGGTTCCTGCTCGAGTTCCTGCCTTGCCTTCCTTTGTTGATG  793

seq1  AACTCTAACCTGTAAGACGTAATTAACCCTTCCTTCCTAAGTTGGTTGTG  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTAACCTGTAAGACGTAATTAACCCTTCCTTCCTAAGTTGGTTGTG  843

seq1  GTCAGTGTTTTATCACAACAACAAACAAACAAGGACGGCATTCAAATGCA  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTGTTTTATCACAACAACAAACAAACAAGGACGGCATTCAAATGCA  893

seq1  AATAAGAAAGCATGTTGTGGGTAGTAATTAAAAGGTACAATCTGGTAGAG  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGAAAGCATGTTGTGGGTAGTAATTAAAAGGTACAATCTGGTAGAG  943

seq1  GCTTCTCAGAGGTGACATTGCAGAAAGGTGCCATAGTTGAGACCTGTCAG  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCAGAGGTGACATTGCAGAAAGGTGCCATAGTTGAGACCTGTCAG  993

seq1  GCAGAGCGAATGAGGAAAATGGACAAGTCCAACTGCTGGCACTTTCTTAT  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGCGAATGAGGAAAATGGACAAGTCCAACTGCTGGCACTTTCTTAT  1043

seq1  CACAAGCATAAAACACTATACTACCAAGGTGGGTTGGTTGTTCAGAGAAT  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGCATAAAACACTATACTACCAAGGTGGGTTGGTTGTTCAGAGAAT  1093

seq1  AATGTTTCTTTTATGGAATTTGTGGAAGAGCTTGAGACGCAACCT-CAAG  1134
      |||||||||||||||||||||||||||||||||||||||||||||  |||
seq2  AATGTTTCTTTTATGGAATTTGTGGAAGAGCTTGAGACGCAACCTGGAAG  1143

seq1  CTAAGCTGACTGGGGAAGAATTC  1157
      |||||||||||||||||||||||
seq2  CTAAGCTGACTGGGGAAGAATTC  1166

seq1: chr15_27064732_27065915
seq2: B6Ng01-137D05.g_68_1251

seq1  GAATTCCTTCCTTTGTCTGGGAGATTTTTCTTTTTTTAATGGGAATGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCCTTTGTCTGGGAGATTTTTCTTTTTTTAATGGGAATGAAG  50

seq1  GGAAATGAAAAAAGCTCAGGAGCAGATCGTGAAATGTTCAGGTCCCTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGAAAAAAGCTCAGGAGCAGATCGTGAAATGTTCAGGTCCCTGAG  100

seq1  AACTGGGATTATTTGCGTGCAGCCCTGGGGCATGGTGAATTGCCGAGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGGATTATTTGCGTGCAGCCCTGGGGCATGGTGAATTGCCGAGTCC  150

seq1  TGGGGCACACGATGGGCATGCTGGGCAGGCTGTTGTGTGTATGTTTGCCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCACACGATGGGCATGCTGGGCAGGCTGTTGTGTGTATGTTTGCCG  200

seq1  AAGAATTAAATTGCTTTTAAAGATAAGCCAAATATAATTCCTTAAGCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTAAATTGCTTTTAAAGATAAGCCAAATATAATTCCTTAAGCAGT  250

seq1  CAATCTATCAATTACAATCCATCCACCTCTCTCCTTAGGTTGTCCAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTATCAATTACAATCCATCCACCTCTCTCCTTAGGTTGTCCAGAGA  300

seq1  GCTCTGCTGGTAGTCCTGAACTAGGGGCCTGGGATCCAGTTTGAGATAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCTGGTAGTCCTGAACTAGGGGCCTGGGATCCAGTTTGAGATAGC  350

seq1  ACAGGTCGGGAGGAAATGTTATGTCTGAAAGGACATAGCCCTGCTCTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTCGGGAGGAAATGTTATGTCTGAAAGGACATAGCCCTGCTCTCAG  400

seq1  CATATTCTTGAACCTCTCAACCCTTGAGTTCCCAGTTGTTGAAACATCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCTTGAACCTCTCAACCCTTGAGTTCCCAGTTGTTGAAACATCCA  450

seq1  CATTAATTCAACTGCTCAGTGGGCTCTTATTTATAAAGATCTTGACTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATTCAACTGCTCAGTGGGCTCTTATTTATAAAGATCTTGACTGTC  500

seq1  CCTCTTCTCCAATTTCTCCCATTATTACAATTGCAAAATAACAATCTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCTCCAATTTCTCCCATTATTACAATTGCAAAATAACAATCTCTT  550

seq1  TAATGAAGCACCAATTCTTACACTCTTCTCCCTCCTTACATATCCTTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAGCACCAATTCTTACACTCTTCTCCCTCCTTACATATCCTTTCC  600

seq1  ATTTCTTCATAACTGTGCATCTCAGCTGAGCAGCGTGCTTCGTATTACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTCATAACTGTGCATCTCAGCTGAGCAGCGTGCTTCGTATTACAG  650

seq1  AGCAACCACTGTGAAAACAATGGAAACTCTGCCATTCTTGTTCCAAACGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACCACTGTGAAAACAATGGAAACTCTGCCATTCTTGTTCCAAACGA  700

seq1  ACTAATTTTTCATGATTC-TTACTTGGCTTGCAGCCTCTGCTAGGGAATG  749
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACTAATTTTTCATGATTCTTTACTTGGCTTGCAGCCTCTGCTAGGGAATG  750

seq1  TCTCTCTCCTTCCAGCAAGGTCAGCCTCTGCATCTACACTACCCATCATC  799
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCCTTTCAGCAAGGTCAGCCTCTGCATCTACACTACCCATCATC  800

seq1  TTGTAACTTTATGTTCTTGTCATTTATTTCTGCTTTGATCTTTATTTATT  849
      |||||||||||||||||||||||||||||||||||||||||||||||  |
seq2  TTGTAACTTTATGTTCTTGTCATTTATTTCTGCTTTGATCTTTATTTTAT  850

seq1  ATGCATGTTTCT-GGGTAGTGTATACCTATGTGCATTTGTATGCCTATGT  898
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATGCATGTTTCTGGGGTAGTGTATACCTATGTGCATTTGTATGCCTATGT  900

seq1  ATGCGGAGACCAGAGTTTGACAATATCTGGTGCCAGTTTTATTGTTCCCT  948
      |||||||||||||||||||||||||||||||||||||||||||  |||||
seq2  ATGCGGAGACCAGAGTTTGACAATATCTGGTGCCAGTTTTATTTGTCCCT  950

seq1  GTATAATATTTT-GAGACAGAATCACT--CACTGAAATGGACATTCACAG  995
      |||| ||||||| ||||||| ||||||  |||||||||||||||||| ||
seq2  GTAT-ATATTTTGGAGACAG-ATCACTTCCACTGAAATGGACATTCA-AG  997

seq1  ATCAGCTAGACTGCTTGAGCAGTGGG-CTCTCTAGATCCGTCTCCACCAA  1044
      |||||||||||||| ||||||||||| |||||||||| ||||||||||||
seq2  ATCAGCTAGACTGC-TGAGCAGTGGGCCTCTCTAGATTCGTCTCCACCAA  1046

seq1  CTGCACAGAGATTACAGGCATTTGCTACCACCCGAGCT-CCCTACAT-GC  1092
      |||||||||||||||||||| ||||||||| ||||||| |||||||| ||
seq2  CTGCACAGAGATTACAGGCA-TTGCTACCA-CCGAGCTCCCCTACATGGC  1094

seq1  CTCTAGAGATCCAAATTCAACTCCTCAAGCTCACACAG-CCAGCATCTTC  1141
      ||||| |||  |||| |||   ||||| ||||   ||| |||||||||||
seq2  CTCTAAAGAATCAAAGTCACTCCCTCAGGCTCCACCAGCCCAGCATCTTC  1144

seq1  CCTGAGCCTAGAGTCATCTCTCCTCCTCACATTCCACATATTC  1184
      |  |||||||||| |  ||||||||||| |||||  |||||||
seq2  CTGGAGCCTAGAGGCTACTCTCCTCCTC-CATTC--CATATTC  1184