BAC Information

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BAC

Clone NameB6Ng01-137E14
Chromosome15 (Build37)
Map Location 60,293,843 - 60,452,559
singlet/doubletdoublet
Overlap geneLOC623094
Upstream geneNsmce2, Trib1, LOC665602, EG632248, LOC665613, 4933412E24Rik, LOC100040266, LOC623048, LOC211832
Downstream geneEG632412, LOC100040311, D330050I23Rik, 9930014A18Rik, A1bg, LOC100040323
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137E14.bB6Ng01-137E14.g
ACCDH936843DH936844
length1,038881
definitionDH936843|Mus musculus domesticus DNA, BAC clone: B6Ng01-137E14, 5' end.DH936844|Mus musculus domesticus DNA, BAC clone: B6Ng01-137E14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,451,527 - 60,452,559)(60,293,843 - 60,294,601)
sequence
gaattcatctttgtcttctaattgtttagaaagaggaaaaacaagaatag
gaaatctgaactgtggtttcctgcctctgaaacctaattccctcttccta
gagcttgaagtcaccctgcaaaatatgcacagaaatggacctccttcaca
ccaccactgcctagcttatttgaaatgagatgactatcatttgtgactca
cttataaacttctgttaggaacttttaggtttgcccatttttcctctttt
tttttttttcttttctcatttgctcagtctcttagacagcttggagcaca
ccagtatgagaattgatgagatcatttcaaaagccacccattttctgatt
tgcatttctttgatagctgctaaagattgggcctctgaaagggtcaatgc
aacaagacagtgatctgtcttcagtgctggcagcaggttgatgtgtctgg
ctataagagacaccaggtacttagtgctgtccatcacaaacatgaaagga
ccacgaaacatgtccaaataaagctccatcatgtcaaatttctctgcttc
tgtgtaagtcaggtcatttcccattcaaccagaaaacagcaatgaattat
tgtgcacttagtaaatggaagtattcactggggatgaggggttgactggt
ccatgctaatgacctcgtactgcttaagttcatgcatcattctctcaaca
gctatctgacaggaatatggaatccctaaattgcagagggaggtggggag
ctcagctagtacaacatttattcttcttctgttaagcagatgttgtgtga
cgagaccaggtgtgattttcagggcttgagtgctttctctgggttctact
tgttgcatagatttctacagttactgaaggaaaacaagactctgtccagc
acaatggggaaggtggcagaagttctagatctttggtggcaggaaggtgg
gtatttcttgtcactatcctgaacccaaactaaaggctgttttgttattt
tccgaaaggcctgtcactcccatggagttgaagcactg
gaattcaatcatctgagataaatatgcactgaacatagagacagggaaat
ttttgttaaaaatatataaatataatctggcaaattagtattaggcaaaa
caaagcaatataaaagtagacaaaaacctcaaaaaaagatatatcaggga
agtgtataaacacatgttgttattaatataaaaattgtggtaaattgtgt
agatgtacaacattcacaaaaagatttcatgacttctgaattcattttaa
aaacttaaaagacaaatcagagagaagacaatgttgcccacttccttagt
agcttttcaatatagtactagaagttttatctagagcaataagacaacta
aacgagatcaagtggattcaaaatggaaagaagtcaaagtattgctattt
gcagatgatgtgatagtgatctcaaaatttctaccagagaactcctacag
ctgataaataccttcagtaaattgactggttacagaattaatacaaaaaa
gcagtagccctccttaatataaataatcaatgagctgggaaaaattagga
aagcaccattcttcacaatagccaaaacgaatataaaatattttggtgta
actctaacccaagcaagtgaaagtgctgtgtgacaagatctttgagtctt
tgaagaaaaatcaaaaatgaggaatatttcagaagatacagaagatagaa
aggtctacaatactcattaattgataggattaacataggaaaactggcca
tcttaccaaaagcaacactgtaaaagcaatattcaacttcgtatggaaac
ccaaaatccccaggatagttaaagtaatccttgtacaataaaaggacttt
ctgaaggtatcaccatcctcaatcttaagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_60451527_60452559
seq2: B6Ng01-137E14.b_46_1083 (reverse)

seq1  CAGTGCCTACAACT-CATGGGAGTGA-AGGCATTGC-GAAAATAACAATA  47
      ||||| || ||||| ||||||||||| |||| || | ||||||||||| |
seq2  CAGTG-CTTCAACTCCATGGGAGTGACAGGCCTTTCGGAAAATAACAAAA  49

seq1  CAGCCTTTATGTTTGGGTTCA-GATAGTGGACATGAAATACCCACCTTCC  96
      ||||||||| ||||||||||| |||||| |||| ||||||||||||||||
seq2  CAGCCTTTA-GTTTGGGTTCAGGATAGT-GACAAGAAATACCCACCTTCC  97

seq1  TG-CACCAAAGATCTAGAACTTCTGCCCACCTTCCCCATTGTGCTGGACA  145
      || |||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGCCACCAAAGATCTAGAACTTCTG-CCACCTTCCCCATTGTGCTGGACA  146

seq1  GAGTCTTG-TTTCCTTCAGTAACTGTAGAAATCTATGCAACAAGTAGAAC  194
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTTGTTTTCCTTCAGTAACTGTAGAAATCTATGCAACAAGTAGAAC  196

seq1  CCAGAGAAAGCACTCAAGCCCTG-AAATCACACCTGGTCTCGTCACACAA  243
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CCAGAGAAAGCACTCAAGCCCTGAAAATCACACCTGGTCTCGTCACACAA  246

seq1  CATCTGCTTAACAG-AGAAGAATAAATGTTGTACTAGCTGAGCT-CCCAC  291
      |||||||||||||| ||||||||||||||||||||||||||||| |||||
seq2  CATCTGCTTAACAGAAGAAGAATAAATGTTGTACTAGCTGAGCTCCCCAC  296

seq1  CTCCCTCTGCAATTTAGGGATTCCATATTCCTGTCAGATAGCTGTTGAGA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCTGCAATTTAGGGATTCCATATTCCTGTCAGATAGCTGTTGAGA  346

seq1  GGATGATGCATGAACTTAAGCAGTACGAGGTCATTAGCATGGACCAGTCA  391
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATGCATGAACTTAAGCAGTACGAGGTCATTAGCATGGACCAGTCA  396

seq1  ACCCCTCATCCCCAGTGAATACTTCCATTTACTAAGTGCACAATAATTCA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTCATCCCCAGTGAATACTTCCATTTACTAAGTGCACAATAATTCA  446

seq1  TTGCTGTTTTCTGGTTGAATGGGAAATGACCTGACTTACACAGAAGCAGA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTTTTCTGGTTGAATGGGAAATGACCTGACTTACACAGAAGCAGA  496

seq1  GAAATTTGACATGATGGAGCTTTATTTGGACATGTTTCGTGGTCCTTTCA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTGACATGATGGAGCTTTATTTGGACATGTTTCGTGGTCCTTTCA  546

seq1  TGTTTGTGATGGACAGCACTAAGTACCTGGTGTCTCTTATAGCCAGACAC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTGATGGACAGCACTAAGTACCTGGTGTCTCTTATAGCCAGACAC  596

seq1  ATCAACCTGCTGCCAGCACTGAAGACAGATCACTGTCTTGTTGCATTGAC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACCTGCTGCCAGCACTGAAGACAGATCACTGTCTTGTTGCATTGAC  646

seq1  CCTTTCAGAGGCCCAATCTTTAGCAGCTATCAAAGAAATGCAAATCAGAA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCAGAGGCCCAATCTTTAGCAGCTATCAAAGAAATGCAAATCAGAA  696

seq1  AATGGGTGGCTTTTGAAATGATCTCATCAATTCTCATACTGGTGTGCTCC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGTGGCTTTTGAAATGATCTCATCAATTCTCATACTGGTGTGCTCC  746

seq1  AAGCTGTCTAAGAGACTGAGCAAATGAGAAAAGAAAAAAAAAAAAAGAGG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTCTAAGAGACTGAGCAAATGAGAAAAGAAAAAAAAAAAAAGAGG  796

seq1  AAAAATGGGCAAACCTAAAAGTTCCTAACAGAAGTTTATAAGTGAGTCAC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGGGCAAACCTAAAAGTTCCTAACAGAAGTTTATAAGTGAGTCAC  846

seq1  AAATGATAGTCATCTCATTTCAAATAAGCTAGGCAGTGGTGGTGTGAAGG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATAGTCATCTCATTTCAAATAAGCTAGGCAGTGGTGGTGTGAAGG  896

seq1  AGGTCCATTTCTGTGCATATTTTGCAGGGTGACTTCAAGCTCTAGGAAGA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCATTTCTGTGCATATTTTGCAGGGTGACTTCAAGCTCTAGGAAGA  946

seq1  GGGAATTAGGTTTCAGAGGCAGGAAACCACAGTTCAGATTTCCTATTCTT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATTAGGTTTCAGAGGCAGGAAACCACAGTTCAGATTTCCTATTCTT  996

seq1  GTTTTTCCTCTTTCTAAACAATTAGAAGACAAAGATGAATTC  1033
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCCTCTTTCTAAACAATTAGAAGACAAAGATGAATTC  1038

seq1: chr15_60293843_60294601
seq2: B6Ng01-137E14.g_70_828

seq1  GAATTCAATCATCTGAGATAAATATGCACTGAACATAGAGACAGGGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCATCTGAGATAAATATGCACTGAACATAGAGACAGGGAAAT  50

seq1  TTTTGTTAAAAATATATAAATATAATCTGGCAAATTAGTATTAGGCAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTAAAAATATATAAATATAATCTGGCAAATTAGTATTAGGCAAAA  100

seq1  CAAAGCAATATAAAAGTAGACAAAAACCTCAAAAAAAGATATATCAGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCAATATAAAAGTAGACAAAAACCTCAAAAAAAGATATATCAGGGA  150

seq1  AGTGTATAAACACATGTTGTTATTAATATAAAAATTGTGGTAAATTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTATAAACACATGTTGTTATTAATATAAAAATTGTGGTAAATTGTGT  200

seq1  AGATGTACAACATTCACAAAAAGATTTCATGACTTCTGAATTCATTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTACAACATTCACAAAAAGATTTCATGACTTCTGAATTCATTTTAA  250

seq1  AAACTTAAAAGACAAATCAGAGAGAAGACAATGTTGCCCACTTCCTTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTAAAAGACAAATCAGAGAGAAGACAATGTTGCCCACTTCCTTAGT  300

seq1  AGCTTTTCAATATAGTACTAGAAGTTTTATCTAGAGCAATAAGACAACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTCAATATAGTACTAGAAGTTTTATCTAGAGCAATAAGACAACTA  350

seq1  AACGAGATCAAGTGGATTCAAAATGGAAAGAAGTCAAAGTATTGCTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGAGATCAAGTGGATTCAAAATGGAAAGAAGTCAAAGTATTGCTATTT  400

seq1  GCAGATGATGTGATAGTGATCTCAAAATTTCTACCAGAGAACTCCTACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGATGTGATAGTGATCTCAAAATTTCTACCAGAGAACTCCTACAG  450

seq1  CTGATAAATACCTTCAGTAAATTGACTGGTTACAGAATTAATACAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAAATACCTTCAGTAAATTGACTGGTTACAGAATTAATACAAAAAA  500

seq1  GCAGTAGCCCTCCTTAATATAAATAATCAATGAGCTGGGAAAAATTAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTAGCCCTCCTTAATATAAATAATCAATGAGCTGGGAAAAATTAGGA  550

seq1  AAGCACCATTCTTCACAATAGCCAAAACGAATATAAAATATTTTGGTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACCATTCTTCACAATAGCCAAAACGAATATAAAATATTTTGGTGTA  600

seq1  ACTCTAACCCAAGCAAGTGAAAGTGCTGTGTGACAAGATCTTTGAGTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAACCCAAGCAAGTGAAAGTGCTGTGTGACAAGATCTTTGAGTCTT  650

seq1  TGAAGAAAAATCAAAAATGAGGAATATTTCAGAAGATACAGAAGATAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAAAATCAAAAATGAGGAATATTTCAGAAGATACAGAAGATAGAA  700

seq1  AGGTCTACAATACTCATTAATTGATAGGATTAACATAGGAAAACTGGCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTACAATACTCATTAATTGATAGGATTAACATAGGAAAACTGGCCA  750

seq1  TCTTACCAA  759
      |||||||||
seq2  TCTTACCAA  759