BAC Information

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BAC

Clone NameB6Ng01-137H05
Chromosome15 (Build37)
Map Location 55,994,525 - 55,995,580
singlet/doubletsinglet
Overlap genenone
Upstream geneDepdc6, Col14a1, Mrpl13, Mtbp, Sntb1, LOC665348, LOC100039908
Downstream geneHba-ps3, Has2, EG594843, LOC435442, LOC100040067, LOC100039984
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137H05.bB6Ng01-137H05.g
ACCDH936965DH936966
length1,1701,054
definitionDH936965|Mus musculus domesticus DNA, BAC clone: B6Ng01-137H05, 5' end.DH936966|Mus musculus domesticus DNA, BAC clone: B6Ng01-137H05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gactactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacactcacaaa
ggaactcacacaatatgtactcactgacaagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactacgcccctccttagaagtgggaa
taaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagaatgccatatccagggatccactccataatc
agcatccaaacgctgacaccatttgcatacactagcaagattttatcgaa
aggacccagatgtagctgtctctttgtgagactatgccgggcctagcaaa
cacagagtggatgctcacagtcagctaatggatggatcacagggcctccc
aatggaggagctagagaaagtacccatgagctaaagggatctgcaaccct
atagtggaacaacttatgaactaaccagtaccttggagctcttgactcta
gctgcattggtatcaagatggctaatgggcatcactggaagaaagccatt
ggacatgcaacttattggcccagacaggtaccgctcagtgtcaaaaaggg
agtgtgggggtattggatgc
gaattcagtgggaaacaatctacatttcataacggtgttaaagtcaggat
atgagggcaacatagagataagatgagacactgaatatctagagaccttg
gtccactctaactgaacctcgtcgctattcttccagagattactgaaggc
agccctaatgcccccaggatactccttgaaacttggcataatgattatgg
caataacagagatggaggcctgaagacttgaagaattttccagttccaga
ttgggattgatgatacatccaccttcatggactttactaggttctcagcc
attattggattactcatataatatcatgcaaaccaactcaacaaattccc
tttcaatgtattcattccatcaggtagttctgtccctctccagatcctaa
tatacctcaattttcgtttttattaatttattgttgttttgaacatatat
gccataagtgtgcagtatctgaatttgtttatttaaaaattgttcacctt
tttctgtatgcttttaaatttatctatggagttcattttattatttgtca
caatgatgatatctttcagaattatatagtattgttattacattatatat
tgactcaaggaagagtggtccttcctaggaaagcagtgaacttagatctt
acaggagacgtatctttctatattgtaaagaaaattgaaaatggcatgtg
acaatatagcatgcataaagtattacttttatgtccctgtgtaaattgta
agtttcctgataataagtactactacaatttctgacgccattgagtttac
attgggcaccttggtctcattaactagaaccatcctcttgctcctctctc
tcttgtcctgagcaagatattttctcaaacttgcatttgtcccatgtagt
agaatacagaactacaatctctgattttcacgacctctattgaaacaaaa
gatgtttgattcaactaaagccttctcattctaattctgacacaagcttt
gaattttccttgtttggaaaagcacactctctgcaccttggtttgcatca
agtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_55994525_55995580
seq2: B6Ng01-137H05.g_69_1122 (reverse)

seq1  CACTTGGATGCAAACCATGGTTGCAGGGATGTGTGCTTTTCCAAACAAGG  50
      ||||| ||||||||||| || ||||| || ||||||||||||||||||||
seq2  CACTT-GATGCAAACCAAGG-TGCAGAGA-GTGTGCTTTTCCAAACAAGG  47

seq1  AAAAATCAAAGCTTGTGTCAGATTTAGAAATGAG-AGGCTCTAGTTTGAT  99
      |||| ||||||||||||||||| |||| |||||| ||||| |||||  ||
seq2  AAAATTCAAAGCTTGTGTCAGAATTAG-AATGAGAAGGCTTTAGTTGAAT  96

seq1  CAAACATC-TCTGTTTC-ATAGAGGTCGTGAAAATTCAGAGATTGTTAGT  147
      |||||||| | |||||| |||||||||||||||| |||||||||| ||||
seq2  CAAACATCTTTTGTTTCAATAGAGGTCGTGAAAA-TCAGAGATTG-TAGT  144

seq1  TCTGTATTCTACTACATGGGACAAATGCAAGTTTGTGAAAATATC-TGCT  196
      ||||||||||||||||||||||||||||||||||| ||||||||| ||||
seq2  TCTGTATTCTACTACATGGGACAAATGCAAGTTTGAGAAAATATCTTGCT  194

seq1  CAGGACAAGAGAGAGAGGAGCAAGAGGATGGTTCTAGTTAATGAGACCAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAAGAGAGAGAGGAGCAAGAGGATGGTTCTAGTTAATGAGACCAA  244

seq1  GGTGGCCAATGTAAACTCAATGGCGTCAGAAATTGTAGTAGTACTTATTA  296
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCCAATGTAAACTCAATGGCGTCAGAAATTGTAGTAGTACTTATTA  294

seq1  TCAGGAAACTTACAATTTACACAGGGACATAAAAGTAATACTTTATGCAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAACTTACAATTTACACAGGGACATAAAAGTAATACTTTATGCAT  344

seq1  GCTATATTGTCACATGCCATTTTCAATTTTCTTTACAATATAGAAAGATA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATATTGTCACATGCCATTTTCAATTTTCTTTACAATATAGAAAGATA  394

seq1  CGTCTCCTGTAAGATCTAAGTTCACTGCTTTCCTAGGAAGGACCACTCTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTCCTGTAAGATCTAAGTTCACTGCTTTCCTAGGAAGGACCACTCTT  444

seq1  CCTTGAGTCAATATATAATGTAATAACAATACTATATAATTCTGAAAGAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAGTCAATATATAATGTAATAACAATACTATATAATTCTGAAAGAT  494

seq1  ATCATCATTGTGACAAATAATAAAATGAACTCCATAGATAAATTTAAAAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCATTGTGACAAATAATAAAATGAACTCCATAGATAAATTTAAAAG  544

seq1  CATACAGAAAAAGGTGAACAATTTTTAAATAAACAAATTCAGATACTGCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAGAAAAAGGTGAACAATTTTTAAATAAACAAATTCAGATACTGCA  594

seq1  CACTTATGGCATATATGTTCAAAACAACAATAAATTAATAAAAACGAAAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTATGGCATATATGTTCAAAACAACAATAAATTAATAAAAACGAAAA  644

seq1  TTGAGGTATATTAGGATCTGGAGAGGGACAGAACTACCTGATGGAATGAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGTATATTAGGATCTGGAGAGGGACAGAACTACCTGATGGAATGAA  694

seq1  TACATTGAAAGGGAATTTGTTGAGTTGGTTTGCATGATATTATATGAGTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTGAAAGGGAATTTGTTGAGTTGGTTTGCATGATATTATATGAGTA  744

seq1  ATCCAATAATGGCTGAGAACCTAGTAAAGTCCATGAAGGTGGATGTATCA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAATAATGGCTGAGAACCTAGTAAAGTCCATGAAGGTGGATGTATCA  794

seq1  TCAATCCCAATCTGGAACTGGAAAATTCTTCAAGTCTTCAGGCCTCCATC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCCCAATCTGGAACTGGAAAATTCTTCAAGTCTTCAGGCCTCCATC  844

seq1  TCTGTTATTGCCATAATCATTATGCCAAGTTTCAAGGAGTATCCTGGGGG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTATTGCCATAATCATTATGCCAAGTTTCAAGGAGTATCCTGGGGG  894

seq1  CATTAGGGCTGCCTTCAGTAATCTCTGGAAGAATAGCGACGAGGTTCAGT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGGGCTGCCTTCAGTAATCTCTGGAAGAATAGCGACGAGGTTCAGT  944

seq1  TAGAGTGGACCAAGGTCTCTAGATATTCAGTGTCTCATCTTATCTCTATG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTGGACCAAGGTCTCTAGATATTCAGTGTCTCATCTTATCTCTATG  994

seq1  TTGCCCTCATATCCTGACTTTAACACCGTTATGAAATGTAGATTGTTTCC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCTCATATCCTGACTTTAACACCGTTATGAAATGTAGATTGTTTCC  1044

seq1  CACTGAATTC  1056
      ||||||||||
seq2  CACTGAATTC  1054