BAC Information

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BAC

Clone NameB6Ng01-137H18
Chromosome15 (Build37)
Map Location 96,595,843 - 96,771,140
singlet/doubletdoublet
Overlap geneLOC667941, LOC546651
Upstream geneEG629300, LOC667864, Tmem16f, LOC100043329, D030018L15Rik, LOC100043335, EG667869, LOC667874, LOC667894, Arid2, Sfrs2ip, Slc38a1, Slc38a2
Downstream geneSlc38a4, Amigo2, BC038822, LOC100043354, LOC100042774, D15Ertd682e, Pp11r, Rapgef3, 4930570C03Rik, Hdac7a, Vdr
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137H18.bB6Ng01-137H18.g
ACCDH936991DH936992
length4281,167
definitionDH936991|Mus musculus domesticus DNA, BAC clone: B6Ng01-137H18, 5' end.DH936992|Mus musculus domesticus DNA, BAC clone: B6Ng01-137H18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(96,770,707 - 96,771,140)(96,595,843 - 96,597,012)
sequence
tatcttccctgtaaacaaaccttgtctccccccccctcccccttcataag
cagtttctgtcttcgtgtctttcaagtgccatgggtcttgttgttgttgt
tgtcgtcggtgggggtgtgtttgtttttgtttgcttgtgggttttttggt
ttttttgttttgttttgttttttgtttttttttccatcaagaagtgaaag
aactgaaaaggaggccatctcaaattcaggcttctttataagtgtggctt
ccttctttataagtgtgctcgctttaaaactgcttaaacccctgtttgtt
ggaatcccatgaaggaaagagtaaactgatcatcacaggctggagacaaa
cgcaggttgaccagggaggatcataaagcatgcagatggcagagagtgga
gatttcttccaggcaggctcattctggg
gaattcctctgtggcatcatgggtgcctgctgctagaaactcctgaagtt
ctttatacagctgattgtgaattaaagtttcattgctgtgccctcagaaa
gtttccatttgtgaccaaagccctcccccccccatacagttatctgaccc
caggtggagttgcagcccacagtttaagaagctataattgggctggagag
atggctcagtggttaagagcactgactgctcttccagaggtcctgagttc
aattcccagcatccacatggtggctcacaaccatctgtaatgggatctga
tgccctcttctggtgtgtctgaagagagcaacagtgaactcacatgcata
aaataaataaatcttaaaacaaaacaaccaaacaaaaccatgaaactatg
ctcaaacagccgactccactggatacctctactctagactcagagttgtt
ggcagctcagaagctaatgcttatgggtgatttatctaaaaatacagtgg
tcaaaaaaaaaagaggtaaccaatgctctaatcaaatatcaaaagggaaa
acaaacccaaaacaaaataacaacaaaaacaacaaagaaaaaaaaaaaac
aaagcaaaagaaaaaacgttaaaaatcatcccaggtgatagataaaataa
aagatattttaaaaatcttcccctgtgtatgtgtgttttgcctgcatctg
taccaccatgtacctgatggctacagaggccagatgaggaggacatttag
attcccttggaacagaattgtgtttcttatgtaaaatttacatgtttctt
tagttgccatgtgggtgctggggactgaagtttggctctcccggaagtgt
cttccgacaagaagtggccttcctaaagctgagactctttaatgggacag
ttcctcatgctgtggtgagccccaacatgaaattattttcattggctacc
tcataactgaattcttgctactgctgtggatttgtaatctaaatatcggg
ttcccggatggggtccgcgacccacggttgaaacgtacttgggactcctt
aaccatgtgtagtcctcagccaataagagaaaaaaaaaatttgggagagc
ttgagggtgatcacctccaccttgttcgcttccagagagtcagtacacaa
aggattgggtctgcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_96770707_96771140
seq2: B6Ng01-137H18.b_49_482 (reverse)

seq1  CCCAGAATGAGCCTGCCTGGGAGAAGTCTCCACTCTCTGCCCTCTGCATG  50
      |||||||||||||||||||| |||| ||||||||||||||| ||||||||
seq2  CCCAGAATGAGCCTGCCTGGAAGAAATCTCCACTCTCTGCCATCTGCATG  50

seq1  CTTTCTGTTCCTCCCTGGTCAACCTGCGTTTGTCTCCAGCCTGTGATGAT  100
      |||| || ||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATGATCCTCCCTGGTCAACCTGCGTTTGTCTCCAGCCTGTGATGAT  100

seq1  CAGTTTACTCTTTCCTTCATGGGATTCCAACAAACAGGGGTTTAAGCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTACTCTTTCCTTCATGGGATTCCAACAAACAGGGGTTTAAGCAGT  150

seq1  TTTAAAGCGAGCACACTTATAAAGAAGGAAGCCACACTTATAAAGAAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGCGAGCACACTTATAAAGAAGGAAGCCACACTTATAAAGAAGCC  200

seq1  TGAATTTGAGATGGCCTCCTTTTCAGTTCTTTCACTTCTTGATGGAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTGAGATGGCCTCCTTTTCAGTTCTTTCACTTCTTGATGGAAAAA  250

seq1  AAAACAAAAAACAAAACAAAACAAAAAAACCAAAAAACCCACAAGCAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAAAACAAAACAAAACAAAAAAACCAAAAAACCCACAAGCAAAC  300

seq1  AAAAACAAACACACCCCCACCGACGACAACAACAACAACAAGACCCATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAACACACCCCCACCGACGACAACAACAACAACAAGACCCATGG  350

seq1  CACTTGAAAGACACGAAGACAGAAACTGCTTATGAAGGGGGAGGGGGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGAAAGACACGAAGACAGAAACTGCTTATGAAGGGGGAGGGGGGGG  400

seq1  GAGACAAGGTTTGTTTACAGGGAAGATAGAATTC  434
      ||||||||||||||||||||||||||||||||||
seq2  GAGACAAGGTTTGTTTACAGGGAAGATAGAATTC  434

seq1: chr15_96595843_96597012
seq2: B6Ng01-137H18.g_69_1235

seq1  GAATTCCTCTGTGGCATCATGGGTGCCTGCTGCTAGAAACTCCTGAAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTGTGGCATCATGGGTGCCTGCTGCTAGAAACTCCTGAAGTT  50

seq1  CTTTATACAGCTGATTGTGAATTAAAGTTTCATTGCTGTGCCCTCAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATACAGCTGATTGTGAATTAAAGTTTCATTGCTGTGCCCTCAGAAA  100

seq1  GTTTCCATTTGTGACCAAAGCCCTCCCCCCCCCATACAGTTATCTGACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCATTTGTGACCAAAGCCCTCCCCCCCCCATACAGTTATCTGACCC  150

seq1  CAGGTGGAGTTGCAGCCCACAGTTTAAGAAGCTATAATTGGGCTGGAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGGAGTTGCAGCCCACAGTTTAAGAAGCTATAATTGGGCTGGAGAG  200

seq1  ATGGCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTC  250

seq1  AATTCCCAGCATCCACATGGTGGCTCACAACCATCTGTAATGGGATCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCCAGCATCCACATGGTGGCTCACAACCATCTGTAATGGGATCTGA  300

seq1  TGCCCTCTTCTGGTGTGTCTGAAGAGAGCAACAGTGAACTCACATGCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCTTCTGGTGTGTCTGAAGAGAGCAACAGTGAACTCACATGCATA  350

seq1  AAATAAATAAATCTTAAAACAAAACAACCAAACAAAACCATGAAACTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATAAATCTTAAAACAAAACAACCAAACAAAACCATGAAACTATG  400

seq1  CTCAAACAGCCGACTCCACTGGATACCTCTACTCTAGACTCAGAGTTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACAGCCGACTCCACTGGATACCTCTACTCTAGACTCAGAGTTGTT  450

seq1  GGCAGCTCAGAAGCTAATGCTTATGGGTGATTTATCTAAAAATACAGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCTCAGAAGCTAATGCTTATGGGTGATTTATCTAAAAATACAGTGG  500

seq1  TCAAAAAAAAAAGAGGTAACCAATGCTCTAATCAAATATCAAAAGGGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAAAAAAAGAGGTAACCAATGCTCTAATCAAATATCAAAAGGGAAA  550

seq1  ACAAACCCAAAACAAAATAACAACAAAAACAACAAAGAAAAAAAAAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACCCAAAACAAAATAACAACAAAAACAACAAAGAAAAAAAAAAAAC  600

seq1  AAAGCAAAAGAAAAAACGTTAAAAATCATCCCAGGTGATAGATAAAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAAAGAAAAAACGTTAAAAATCATCCCAGGTGATAGATAAAATAA  650

seq1  AAGATATTTTAAAAATCTTCCCCTGTGTATGTGTGTTTTGCCTGCATCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATTTTAAAAATCTTCCCCTGTGTATGTGTGTTTTGCCTGCATCTG  700

seq1  TACCACCATGTACCTGATGGCTACAGAGGCCAGATGAGGAGGACA-TTAG  749
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TACCACCATGTACCTGATGGCTACAGAGGCCAGATGAGGAGGACATTTAG  750

seq1  ATTCCCTTGGAACAGAATTGTGTTTCTTATGTAAAATTTACATGTTTC-T  798
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATTCCCTTGGAACAGAATTGTGTTTCTTATGTAAAATTTACATGTTTCTT  800

seq1  TAGTTGCCATGTGGGTGCTGGGGACTG-AGTTTGGCTCTCCCGGAAGTGT  847
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TAGTTGCCATGTGGGTGCTGGGGACTGAAGTTTGGCTCTCCCGGAAGTGT  850

seq1  CTTCCGACAAGAAGTGGCCTTCCTAAGGCTGAGACTCTTTAAT-GGACAG  896
      |||||||||||||||||||||||||| |||||||||||||||| ||||||
seq2  CTTCCGACAAGAAGTGGCCTTCCTAAAGCTGAGACTCTTTAATGGGACAG  900

seq1  TTCCTCATGCTGTGGTGAGCCCCAACCATGAAATTATTTTCATT-GCTAC  945
      ||||||||||||||||||||||||| |||||||||||||||||| |||||
seq2  TTCCTCATGCTGTGGTGAGCCCCAA-CATGAAATTATTTTCATTGGCTAC  949

seq1  CTCATAACTGTAATCTTGCTACTGCTGT-GAATTGTAATCTAAATTATCG  994
      |||||||||| | ||||||||||||||| || |||||||||||| |||||
seq2  CTCATAACTGAATTCTTGCTACTGCTGTGGATTTGTAATCTAAA-TATCG  998

seq1  GTGTTTCCCGATGGGGT-CGCGACCCACGGGTTGAGAACCGTAGCTCTGG  1043
      | ||| || |||||||| |||||||||||| |   ||| |||| ||  ||
seq2  G-GTTCCCGGATGGGGTCCGCGACCCACGGTT---GAAACGTA-CTTGGG  1043

seq1  ACT-CTTAACCACTGTGTCAGTTCTCCAGCCCAATAA-AG-AAAAAAAAA  1090
      ||| |||||||| ||||| ||| || ||| ||||||| || |||||||||
seq2  ACTCCTTAACCA-TGTGT-AGTCCT-CAG-CCAATAAGAGAAAAAAAAAA  1089

seq1  TTATGAAGAGCTAGAGTGCTATCACTTCAACCTAGAATGCTTCTAGAGGC  1140
      ||  | |||||| ||| |  ||||| || |||| |   ||||| ||||  
seq2  TTTGGGAGAGCTTGAGGGTGATCACCTCCACCTTGTTCGCTTCCAGAGAG  1139

seq1  CCATGTAC-CAAAGGATTGGTGCCCTGCTTG  1170
       || |||| ||||||||||  |  |||||||
seq2  TCA-GTACACAAAGGATTG--GGTCTGCTTG  1167