BAC Information

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BAC

Clone NameB6Ng01-139G01
Chromosome15 (Build37)
Map Location 38,855,380 - 38,972,327
singlet/doubletdoublet
Overlap geneFzd6, LOC636952, Cthrc1, Slc25a32, Wdsof1
Upstream geneRrm2b, LOC100041478, Edd1, Odf1, LOC382986, LOC667563, Klf10, Azin1, Siah1-ps2, Atp6v1c1, Baalc, TOB3L
Downstream geneLOC671215, Rims2, Tm7sf4, Dpys, Lrp12, LOC100039130, LOC670013
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-139G01.bB6Ng01-139G01.g
ACCDH938378DH938379
length6751,069
definitionDH938378|Mus musculus domesticus DNA, BAC clone: B6Ng01-139G01, 5' end.DH938379|Mus musculus domesticus DNA, BAC clone: B6Ng01-139G01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,855,380 - 38,856,053)(38,971,252 - 38,972,327)
sequence
gaattctttttttaaagtgactttccatctgagttttagaattgttcctt
cattgccttccggcatgtgacgtatgtgaagtgttcagaattatttcctt
tgcatattcgtccctggaactgcggctgtgctctttctttctggtctgat
tgttttggcattgtcattgttcattctttccatctgcaaggcgttcatta
tcccgtgatatttagcatttacaagagatgccatggggtagcagacacca
cactaggccctgaggatacagcagcgaacagaataatcagaggtccttct
tcctttaatttaatcctagtgggaagggtaaacgttaagaaacacatggt
atctaatgatgtggtagatataggtagggacagtaaagggtggaacatga
cagaatcctctcaccgcctgcgcaggtgaaaggcaagcagaagtcatggc
tggcagagtgaagggtgcaaagcccaaggcaggagcagcatggaaagaga
agcaaaggagagcgggtggcagaagacagactggagccagtgtggggtct
ggggtcttgaagcccgcaggcttggtaaagacttttgacatggtctggtg
gagtccttggacctaggtttcagataatcacatttggtggaactatggag
tggtggatgtaagtttacaagcgtg
gaattcagtctggcgatgcctcagaaaattggacatagtttttccagaag
atccagcaatatctctcctgaacatatacccagaagatgctccaacttgt
aataaggacacatgctccaatatgttaatagcagccttatttataatagc
cagaatctggaaagaacccagatttcactcaacggaggaatggatacaga
aaatgtggtacatttacacaatggagtactactcagctattaaaaacaat
gaaattatgatattcttagacaaatggggccagaagaggttctgaagagt
tttaaaaggaggtgaacgattttaaaattattccaatctctggtaagtta
gtaggtgcagcattggcattaccagtgctgacaccagcacccttaccacc
ttgcacctccccacacaggctgtcttcttcctttccatatgcactttctc
cttctcttttccaccacctacaatgactctccagtttctttcacctagtt
acagttttgtcaagtaagtctaggccacttaaccaagaaagggtacatac
acgcgcacactcggcactggtacgtatataagtatatatattcagttata
tttttttatattttgatatgcattataagtagtcatatatctttgagtca
tattatcaatctttcaaaagtttttgtttgttttactgtagtttttagag
ggttgcccaggtcagcctatgtgctggttagtttatgttaactagacaca
agctagagtcatctggaaagagggaccctcaactgataaaatgcctccat
cagactaagctacaggcaggtctgtgggggcattttcttgtgtaatgact
gatgtctgagggcccatcccattgtgggtggtgccatccctggataggtg
gtcctaagtgattaataaacagttggttgagccagctactggaagttagc
cagtgcacagcattctttccatggcctctgcttttgttcctacctccagg
tctcgcttgagttctttcctgactcccctcataatagaccaactaggaag
tctaagcaataaactcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_38855380_38856053
seq2: B6Ng01-139G01.b_47_721

seq1  GAATTCTTTTTTTAAAGTGACTTTCCATCTGAGTTTTAGAATTGTTCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTTTAAAGTGACTTTCCATCTGAGTTTTAGAATTGTTCCTT  50

seq1  CATTGCCTTCCGGCATGTGACGTATGTGAAGTGTTCAGAATTATTTCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCCTTCCGGCATGTGACGTATGTGAAGTGTTCAGAATTATTTCCTT  100

seq1  TGCATATTCGTCCCTGGAACTGCGGCTGTGCTCTTTCTTTCTGGTCTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATTCGTCCCTGGAACTGCGGCTGTGCTCTTTCTTTCTGGTCTGAT  150

seq1  TGTTTTGGCATTGTCATTGTTCATTCTTTCCATCTGCAAGGCGTTCATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGGCATTGTCATTGTTCATTCTTTCCATCTGCAAGGCGTTCATTA  200

seq1  TCCCGTGATATTTAGCATTTACAAGAGATGCCATGGGGTAGCAGACACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGTGATATTTAGCATTTACAAGAGATGCCATGGGGTAGCAGACACCA  250

seq1  CACTAGGCCCTGAGGATACAGCAGCGAACAGAATAATCAGAGGTCCTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGGCCCTGAGGATACAGCAGCGAACAGAATAATCAGAGGTCCTTCT  300

seq1  TCCTTTAATTTAATCCTAGTGGGAAGGGTAAACGTTAAGAAACACATGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTAATTTAATCCTAGTGGGAAGGGTAAACGTTAAGAAACACATGGT  350

seq1  ATCTAATGATGTGGTAGATATAGGTAGGGACAGTAAAGGGTGGAACATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATGATGTGGTAGATATAGGTAGGGACAGTAAAGGGTGGAACATGA  400

seq1  CAGAATCCTCTCACCGCCTGCGCAGGTGAAAGGCAAGCAGAAGTCATGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATCCTCTCACCGCCTGCGCAGGTGAAAGGCAAGCAGAAGTCATGGC  450

seq1  TGGCAGAGTGAAGGGTGCAAAGCCCAAGGCAGGAGCAGCATGGAAAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGAGTGAAGGGTGCAAAGCCCAAGGCAGGAGCAGCATGGAAAGAGA  500

seq1  AGCAAAGGAGAGCGGGTGGCAGAAGACAGACTGGAGCCAGTGTGGGGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGGAGAGCGGGTGGCAGAAGACAGACTGGAGCCAGTGTGGGGTCT  550

seq1  GGGGTCTTGAAGCCCGCAGGCTTGGTAAAGAC-TTTGACATGGTCTGGTG  599
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GGGGTCTTGAAGCCCGCAGGCTTGGTAAAGACTTTTGACATGGTCTGGTG  600

seq1  GAGTCCTTGGACCTAGGTTTCAGATAATCACA-TTGGTGGAACTATGGAG  648
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GAGTCCTTGGACCTAGGTTTCAGATAATCACATTTGGTGGAACTATGGAG  650

seq1  TGGTGGATGTAAGTTTAGCAAGCGTG  674
      ||||||||||||||||| ||||||||
seq2  TGGTGGATGTAAGTTTA-CAAGCGTG  675

seq1: chr15_38971252_38972327
seq2: B6Ng01-139G01.g_68_1136 (reverse)

seq1  AAAGAGTTTATTTGGCTTAGACTTCCTAGTTGGTCTATTATGAAGGGGAG  50
      ||||||||||||  |||||||||||||||||||||||||||| |||||||
seq2  AAAGAGTTTATT--GCTTAGACTTCCTAGTTGGTCTATTATG-AGGGGAG  47

seq1  TCAGGACAGGAACTCAAGGCGAGAACCTGGAGGTAGGAACAAAAGCAGAG  100
      |||||| | |||||||| ||||| ||||||||||||||||||||||||||
seq2  TCAGGA-AAGAACTCAA-GCGAG-ACCTGGAGGTAGGAACAAAAGCAGAG  94

seq1  GCCATGG-AAGAATGCTGTGCACTGGCTTACTTCCCAGTGGCTTGCTCAA  149
      ||||||| |||||||||||||||||||| |||| ||||| ||| ||||||
seq2  GCCATGGAAAGAATGCTGTGCACTGGCTAACTT-CCAGTAGCTGGCTCAA  143

seq1  CCAACTGTTTTATTTAATCACTTAGGACCACCTATCCAGGGATGGCACCA  199
      ||||||||||   |||||||||||||||||||||||||||||||||||||
seq2  CCAACTGTTT--ATTAATCACTTAGGACCACCTATCCAGGGATGGCACCA  191

seq1  CCCACAATGGGATGGGCCCTCAGACATCAGTCATTACACAAGAAAATGCC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAATGGGATGGGCCCTCAGACATCAGTCATTACACAAGAAAATGCC  241

seq1  CCCACAGACCTGCCTGTAGCTTAGTCTGATGGAGGCATTTTATCAGTTGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGACCTGCCTGTAGCTTAGTCTGATGGAGGCATTTTATCAGTTGA  291

seq1  GGGTCCCTCTTTCCAGATGACTCTAGCTTGTGTCTAGTTAACATAAACTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCCTCTTTCCAGATGACTCTAGCTTGTGTCTAGTTAACATAAACTA  341

seq1  ACCAGCACATAGGCTGACCTGGGCAACCCTCT-AAAACTACAGTAAAACA  398
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACCAGCACATAGGCTGACCTGGGCAACCCTCTAAAAACTACAGTAAAACA  391

seq1  AACAAAAACTTTTGAAAGATTGATAATATGACTCAAAGATATATGACTAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAACTTTTGAAAGATTGATAATATGACTCAAAGATATATGACTAC  441

seq1  TTATAATGCATATCAAAATATAAAAAAATATAACTGAATATATATACTTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATGCATATCAAAATATAAAAAAATATAACTGAATATATATACTTA  491

seq1  TATACGTACCAGTGCCGAGTGTGCGCGTGTATGTACCCTTTCTTGGTTAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACGTACCAGTGCCGAGTGTGCGCGTGTATGTACCCTTTCTTGGTTAA  541

seq1  GTGGCCTAGACTTACTTGACAAAACTGTAACTAGGTGAAAGAAACTGGAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCTAGACTTACTTGACAAAACTGTAACTAGGTGAAAGAAACTGGAG  591

seq1  AGTCATTGTAGGTGGTGGAAAAGAGAAGGAGAAAGTGCATATGGAAAGGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTGTAGGTGGTGGAAAAGAGAAGGAGAAAGTGCATATGGAAAGGA  641

seq1  AGAAGACAGCCTGTGTGGGGAGGTGCAAGGTGGTAAGGGTGCTGGTGTCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACAGCCTGTGTGGGGAGGTGCAAGGTGGTAAGGGTGCTGGTGTCA  691

seq1  GCACTGGTAATGCCAATGCTGCACCTACTAACTTACCAGAGATTGGAATA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGGTAATGCCAATGCTGCACCTACTAACTTACCAGAGATTGGAATA  741

seq1  ATTTTAAAATCGTTCACCTCCTTTTAAAACTCTTCAGAACCTCTTCTGGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAATCGTTCACCTCCTTTTAAAACTCTTCAGAACCTCTTCTGGC  791

seq1  CCCATTTGTCTAAGAATATCATAATTTCATTGTTTTTAATAGCTGAGTAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTGTCTAAGAATATCATAATTTCATTGTTTTTAATAGCTGAGTAG  841

seq1  TACTCCATTGTGTAAATGTACCACATTTTCTGTATCCATTCCTCCGTTGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCATTGTGTAAATGTACCACATTTTCTGTATCCATTCCTCCGTTGA  891

seq1  GTGAAATCTGGGTTCTTTCCAGATTCTGGCTATTATAAATAAGGCTGCTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAATCTGGGTTCTTTCCAGATTCTGGCTATTATAAATAAGGCTGCTA  941

seq1  TTAACATATTGGAGCATGTGTCCTTATTACAAGTTGGAGCATCTTCTGGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATATTGGAGCATGTGTCCTTATTACAAGTTGGAGCATCTTCTGGG  991

seq1  TATATGTTCAGGAGAGATATTGCTGGATCTTCTGGAAAAACTATGTCCAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTTCAGGAGAGATATTGCTGGATCTTCTGGAAAAACTATGTCCAA  1041

seq1  TTTTCTGAGGCATCGCCAGACTGAATTC  1076
      ||||||||||||||||||||||||||||
seq2  TTTTCTGAGGCATCGCCAGACTGAATTC  1069