BAC Information

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BAC

Clone NameB6Ng01-140A12
Chromosome15 (Build37)
Map Location 6,603,863 - 6,604,455
singlet/doubletsinglet
Overlap geneFyb, EG665511
Upstream geneLOC666319, LOC100039358, LOC666323, Dab2, C9, LOC100039396, LOC100039412, LOC100039453
Downstream gene4921505C17Rik, Osmr, Lifr, Egflam
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140A12.bB6Ng01-140A12.g
ACCDH938865DH938866
length1,065939
definitionDH938865|Mus musculus domesticus DNA, BAC clone: B6Ng01-140A12, 5' end.DH938866|Mus musculus domesticus DNA, BAC clone: B6Ng01-140A12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatcaatccatggcttttctcatgaaggggtgttggattttt
gtcaaatgctttcacagcatctaatgaaatgataatgtgatttttgtctt
tgagtttgtctatatagtggattacgttgataaatttccgtatattaaac
catccctgcatccctgggatgaagcctacttggtaatgatggatgatcct
tttgatgtgtttttggatttggtttgcaaggattttattgagtattttgg
catcgatattaataagagaaattgatctgaagttctccttctttgttgaa
tcttagtgtggcttaggtatcagagtaattgtggcttcatagaatgaatt
gggaagagtaccttctgtatctattttgtgtaatcatttgacgagagttg
gaattaggtctcctttggaggtctaatagaattctgcactaaacccatct
ggccctggacttttttttggggggttgggagactattaatgactgcttct
atttctttaggggaaatgggactgttaaaatcattaatctgatcctgatt
taaatttggtacctggaatctgtctaggaagttgttcatttcatccagat
tttccagttttgttgagtatagcagcttttacaaggatctgatgatgttt
tggatttcctcaggttttttttttgttatgtctcctttttcatttttgat
tttgttaattaggatactatccctgggacatctagttagtctggctaagg
gtttacatatcttgttgatttgctcaagaaccaggtcatggtttggatca
ttttttttgaatagttcttcttgtctccacttggttggtttctgccctat
gtttgattacttcctgcaatctactccttttgtgtgatgaatttagttct
tttgttctagcttttctgggtgtgctatcaagctgctagcctatgctctc
tctattttctttttggaggcactcagggctatgagttttcgcttaggact
gattcacctttgttcccgtgagtttgggtatggtgtggcttcattttcaa
tgaattctaaaagac
gaattccttcccaaaggtcagatgtgtcagggacacgtcatccaggatga
gcccaaatgttgctgcttgctctatgaggtcatcgctcacctgcctggag
gccagctctcgttgggtaatcaattctccagcatcaaattgagccaccac
cgacttgaggatctctgtggtgatagaagacaggacctgctcatcatagt
cctcgacaatgctggtgtagataagaggaagctggctggccaccggctgg
aagaggatgctcagtgtgatattgacgttctgcaatctttgttaccaggt
tccatggttgagagcagcagtcaaagataatcggtttctgtacacaagag
atgaggaaatgagtcccttcccctaccacaatgtcctgtatgccacggaa
tcggtcaaagatgacagctctgtgtccagcatccacattatacaaagcga
gttcaccactcctcctacaactgccaacgccaggccgaactttccaaagg
actcaaacactttggcagccatgactccttgtaaggtttctactcatacc
tgctttcactctgacttccaaatgaattccccccttatctttttttgata
aattttgcttgagagtcatttttattcgatatggctacttcagttttttt
tcttgggaccagttgcttggaagatttttatttccagctttttactctga
ggcagtgtctttctttgtcactgaagtgtgtttcttgtatgcaggaaaat
tctgggtcctgtttacatagccagtctgttagtctatgtctttttattgg
ggaattgagtcattgatattaagagatagtaaggaaaggtattgttattt
cctgtttattttgttgttagaagtgaaattgtgttgtttggctatcttct
tttggttcttgtgaaagaagattactttcttgctttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_6603863_6604455
seq2: B6Ng01-140A12.g_70_647 (reverse)

seq1  GGGGAATTCATGTGGAGGTCAGTGTGAAAGCAGGTGTGAGTGGAAGCAAC  50
      ||||||||||| |||| ||||| |||||||||||| ||||| ||| |   
seq2  GGGGAATTCATTTGGAAGTCAGAGTGAAAGCAGGTATGAGTAGAAACCTT  50

seq1  AGAAGGAGTCATGGCTGCCAAAGTGTTTGAGTCCATTGGAAAGTTCGGCC  100
      | |||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACAAGGAGTCATGGCTGCCAAAGTGTTTGAGTCCTTTGGAAAGTTCGGCC  100

seq1  TGGCGTTGGCAGTTGCAGGAGGCGTGGTGAACTCTGCTTTGTATAATGTG  150
      ||||||||||||||| |||||| ||||||||||| |||||||||||||||
seq2  TGGCGTTGGCAGTTGTAGGAGGAGTGGTGAACTC-GCTTTGTATAATGTG  149

seq1  GATGCTGGACACAGAGCTGTCATCTTTGACCGATTCCGTGGCGTACAGGA  200
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GATGCTGGACACAGAGCTGTCATCTTTGACCGATTCCGTGGCATACAGGA  199

seq1  CATTGTGGTCGGGGAAGGGACTCATTTCCTCATCCCTTGGGTACAGAAAC  250
      ||||||||| |||||||||||||||||||||||| |||| ||||||||||
seq2  CATTGTGGTAGGGGAAGGGACTCATTTCCTCATCTCTTGTGTACAGAAAC  249

seq1  CAATTATCTTTGACTGCCGCTCTCGACCACGGAACGTACCGGTCATCACT  300
      | ||||||||||||||| |||||| |||| |||||             ||
seq2  CGATTATCTTTGACTGCTGCTCTCAACCATGGAAC-------------CT  286

seq1  GGTAGCAAAGACTTGCAGAACGTCAATATCACACTGCGAATCCTCTTCCG  350
      |||| |||||| |||||||||||||||||||||||| | |||||||||| 
seq2  GGTAACAAAGA-TTGCAGAACGTCAATATCACACTGAGCATCCTCTTCCA  335

seq1  GCCGGTGGCCAGCCAGCTTCCTCGTATCTACACCAGCATTGGCGAGGACT  400
      ||||||||||||||||||||||| ||||||||||||||||| ||||||||
seq2  GCCGGTGGCCAGCCAGCTTCCTCTTATCTACACCAGCATTGTCGAGGACT  385

seq1  ATGATGAGCGGGTCCTGCCTTCTATCACCACAGAGATCCTCAAGTCGGTG  450
      ||||||||| ||||||| ||||||||||||||||||||||||||||||||
seq2  ATGATGAGCAGGTCCTGTCTTCTATCACCACAGAGATCCTCAAGTCGGTG  435

seq1  GTGGCTCGATTCGATGCTGGAGAATTGATTACCCAGCGAGAGCTGGTCTC  500
      ||||||| ||| ||||||||||||||||||||||| |||||||||| |||
seq2  GTGGCTCAATTTGATGCTGGAGAATTGATTACCCAACGAGAGCTGGCCTC  485

seq1  CAGGCAGGTGAGCGATGACCTCACAGAGCGAGCGGCAACATTTGGGCTTA  550
      ||||||||||||||||||||||| ||||| ||| |||||||||||||| |
seq2  CAGGCAGGTGAGCGATGACCTCATAGAGCAAGCAGCAACATTTGGGCTCA  535

seq1  TCCTGGATGACGTGTCCCTGACACATCTGACCTTCGGGAAGGA  593
      |||||||||||||||||||||||||||||||||| ||||||||
seq2  TCCTGGATGACGTGTCCCTGACACATCTGACCTTTGGGAAGGA  578