BAC Information

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BAC

Clone NameB6Ng01-140B01
Chromosome15 (Build37)
Map Location 20,805,773 - 20,933,227
singlet/doubletdoublet
Overlap genenone
Upstream geneAcot10, LOC100040302
Downstream geneCdh12, LOC100040351
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140B01.bB6Ng01-140B01.g
ACCDH938891DH938892
length1,1391,037
definitionDH938891|Mus musculus domesticus DNA, BAC clone: B6Ng01-140B01, 5' end.DH938892|Mus musculus domesticus DNA, BAC clone: B6Ng01-140B01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(20,932,069 - 20,933,227)(20,805,773 - 20,806,821)
sequence
gaattcacttaaaattcatttcagtaaggtagcatctgcatagggagaaa
gaacatattggtaatttttattaattttataatatctagagttggtatac
atccaaatgattttttttccaaaattgtcattatcaaggataatgaataa
gggaaaggacaaagaaatttgcatagaaatgttgtagtggttatctattc
tgatgtttctaaggatcccctaaaatatgcaagagcatttaaatgaaagg
acttgtgcaaaaataaatattgacaaaatgataatagtatgatttcaagt
aaatgatatggtgataacttattaacaaaatagattttgttaagcatgca
tgtcattaatctgtatgttttctacatgtgcattagggctaggaatctcc
tgagcaagccatatgactaagttctaagttctgacatggtggcttttcac
tagcaggctgcacttcttttcagtaacaggtaatgtgtttaatttgtgct
ctgtcaaacagtgctattttcctaccattatgataaatgtctaaagccaa
aaagctgaagatatattttccagaatcatttatcattagtaatcccttct
aattgatgaagctggaagtttattaagtatttccctgaaaatgtacaatc
acatatacacagttcaaagacactgtaaacatccttagacaaaggcagag
attatgacactatgcaattgctgtttctcaacttacaaaacctccaaaat
gattataacctttgtgattgatacatactgaatatgtggttcctaaacac
acataattttattcaataaagattgctagcaagtgctgttcagggaaaaa
gaaaattatcattgccttcttgttttggggttccagaagtatacaaagat
ggattgttttgtagagttgagctaagtcctgtgacactaattgctgtaaa
gatagcaaatgtcatctcacacagacagggatgatgtcagattaacagat
tatgtaagatgcacaaagcctaactggaagacagtgagtttattctcact
taaaggaatatgagtagtgtttcacagagcagaaaatactcaaagatagt
acagacaaaagatccccttggaatgattgaacactgatg
gaattcctgcaatgcctataaagtctactggccactgggtgttgaattta
tagcatccagaactagagcgatatcaagatactctctcacattatttcat
tctaagaagcctagggcacaatatgaggtctttctacagagtattttttc
tctcttttatagaaatctctgtagtattggctaactatgaaggacagctt
caaaaggaacatatttgtacaacaaaagaactagggtgctttttattaag
attcatgaaatactgtctgttttgtatagaaatctttttaaaaatgaaaa
ttgagctagaaagctaattaaagtgattgatttctaataactgaaataaa
agaaaattcaaaatccttttacttcatggacaataagtgtcagtgaataa
atagcagacttttggaaataagttcccggaaatgtaccttttttatatac
tgaatatgtatttaaccttttctaaatagttgtgctgctatataataact
ttaattctatatatttctcatatattcatatcaaaataaatatgtttttt
cagtttacgtgatatctataaattatccattgattaaaaaacatcagtaa
taataatttcaaataaaattcaaatttttgattacctaaaatatatttaa
tataaatatttaaaagggagtttaatatgactatttaaaaaatacttcaa
ttctctacatgaccctagagctttaacaaatctcagatcaatgccaacaa
aatgagtatgggtgattcactccaatatatatatgtcatttggaataatt
tctatacaaaattgtaaagaaaacaaaaatcatcacaggacaattagatt
taaagatgtcatataaataggtcactacaaagtaaactatgataaaccac
ttaaaatgcaacatattagagagttatggttaacctttataccctataag
aatgatctcttcattgttttccaatgtagtatgatcattatgaagctata
tagacacagcacaaaatgtacttatcaaatttattgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_20932069_20933227
seq2: B6Ng01-140B01.b_46_1184 (reverse)

seq1  CATCAGTGCTCATCCATTCCAGGGGGATCTTTTGGTCTTGTAGCTATTCT  50
      |||||||| |||  ||||||| ||||||||||| ||| |||| ||| |||
seq2  CATCAGTGTTCAATCATTCCAAGGGGATCTTTT-GTC-TGTA-CTA-TCT  46

seq1  TTGAGTATTTTCTGCTCCTGTTGGAAACAACTTACTCATATTCCTTTAAG  100
      |||||||||||||||| ||||  ||||||   ||||||||||||||||||
seq2  TTGAGTATTTTCTGCT-CTGT--GAAACA--CTACTCATATTCCTTTAAG  91

seq1  TGAGAAATAAAACTCACTGTTCCTTCAAGTTAGGCTTTTGTGGCATCCTT  150
      ||||||   |||||||||||  |||| |||||||| ||||| |||| |||
seq2  TGAGAA--TAAACTCACTGT--CTTCCAGTTAGGC-TTTGT-GCAT-CTT  134

seq1  ACATTAATCTGTTAATCTGACATTGGTTCCCTGTCTGTGGTGAGGTGACA  200
      ||| |||||||||||||||||||    ||||||||||| ||||| |||||
seq2  ACA-TAATCTGTTAATCTGACAT--CATCCCTGTCTGT-GTGAGATGACA  180

seq1  TTTGCTATCTTTACAGCAATTAGTGTCACAGGACTTAGCTCAACTCTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTATCTTTACAGCAATTAGTGTCACAGGACTTAGCTCAACTCTACA  230

seq1  AAACAATCCATCTTTGTATACTTCTGGAACCCCAAAACAAGAAGGCAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATCCATCTTTGTATACTTCTGGAACCCCAAAACAAGAAGGCAATG  280

seq1  ATAATTTTCTTTTTCCCTGAACAGCACTTGCTAGCAATCTTTATTGAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTCTTTTTCCCTGAACAGCACTTGCTAGCAATCTTTATTGAATA  330

seq1  AAATTATGTGTGTTTAGGAACCACATATTCAGTATGTATCAATCACAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATGTGTGTTTAGGAACCACATATTCAGTATGTATCAATCACAAAG  380

seq1  GTTATAATCATTTTGGAGGTTTTGTAAGTTGAGAAACAGCAATTGCATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAATCATTTTGGAGGTTTTGTAAGTTGAGAAACAGCAATTGCATAG  430

seq1  TGTCATAATCTCTGCCTTTGTCTAAGGATGTTTACAGTGTCTTTGAACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATAATCTCTGCCTTTGTCTAAGGATGTTTACAGTGTCTTTGAACTG  480

seq1  TGTATATGTGATTGTACATTTTCAGGGAAATACTTAATAAACTTCCAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATGTGATTGTACATTTTCAGGGAAATACTTAATAAACTTCCAGCT  530

seq1  TCATCAATTAGAAGGGATTACTAATGATAAATGATTCTGGAAAATATATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAATTAGAAGGGATTACTAATGATAAATGATTCTGGAAAATATATC  580

seq1  TTCAGCTTTTTGGCTTTAGACATTTATCATAATGGTAGGAAAATAGCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCTTTTTGGCTTTAGACATTTATCATAATGGTAGGAAAATAGCACT  630

seq1  GTTTGACAGAGCACAAATTAAACACATTACCTGTTACTGAAAAGAAGTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGACAGAGCACAAATTAAACACATTACCTGTTACTGAAAAGAAGTGC  680

seq1  AGCCTGCTAGTGAAAAGCCACCATGTCAGAACTTAGAACTTAGTCATATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCTAGTGAAAAGCCACCATGTCAGAACTTAGAACTTAGTCATATG  730

seq1  GCTTGCTCAGGAGATTCCTAGCCCTAATGCACATGTAGAAAACATACAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTCAGGAGATTCCTAGCCCTAATGCACATGTAGAAAACATACAGA  780

seq1  TTAATGACATGCATGCTTAACAAAATCTATTTTGTTAATAAGTTATCACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGACATGCATGCTTAACAAAATCTATTTTGTTAATAAGTTATCACC  830

seq1  ATATCATTTACTTGAAATCATACTATTATCATTTTGTCAATATTTATTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATTTACTTGAAATCATACTATTATCATTTTGTCAATATTTATTTT  880

seq1  TGCACAAGTCCTTTCATTTAAATGCTCTTGCATATTTTAGGGGATCCTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAAGTCCTTTCATTTAAATGCTCTTGCATATTTTAGGGGATCCTTA  930

seq1  GAAACATCAGAATAGATAACCACTACAACATTTCTATGCAAATTTCTTTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATCAGAATAGATAACCACTACAACATTTCTATGCAAATTTCTTTG  980

seq1  TCCTTTCCCTTATTCATTATCCTTGATAATGACAATTTTGGAAAAAAAAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCCCTTATTCATTATCCTTGATAATGACAATTTTGGAAAAAAAAT  1030

seq1  CATTTGGATGTATACCAACTCTAGATATTATAAAATTAATAAAAATTACC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGATGTATACCAACTCTAGATATTATAAAATTAATAAAAATTACC  1080

seq1  AATATGTTCTTTCTCCCTATGCAGATGCTACCTTACTGAAATGAATTTTA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTTCTTTCTCCCTATGCAGATGCTACCTTACTGAAATGAATTTTA  1130

seq1  AGTGAATTC  1159
      |||||||||
seq2  AGTGAATTC  1139

seq1: chr15_20805773_20806821
seq2: B6Ng01-140B01.g_68_1104

seq1  GAATTCCTGCAATGCCTATAAAGTCTACTGGCCACTGGGTGTTGAATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCAATGCCTATAAAGTCTACTGGCCACTGGGTGTTGAATTTA  50

seq1  TAGCATCCAGAACTAGAGCGATATCAAGATACTCTCTCACATTATTTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATCCAGAACTAGAGCGATATCAAGATACTCTCTCACATTATTTCAT  100

seq1  TCTAAGAAGCCTAGGGCACAATATGAGGTCTTTCTACAGAGTATTTTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGAAGCCTAGGGCACAATATGAGGTCTTTCTACAGAGTATTTTTTC  150

seq1  TCTCTTTTATAGAAATCTCTGTAGTATTGGCTAACTATGAAGGACAGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTTATAGAAATCTCTGTAGTATTGGCTAACTATGAAGGACAGCTT  200

seq1  CAAAAGGAACATATTTGTACAACAAAAGAACTAGGGTGCTTTTTATTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGAACATATTTGTACAACAAAAGAACTAGGGTGCTTTTTATTAAG  250

seq1  ATTCATGAAATACTGTCTGTTTTGTATAGAAATCTTTTTAAAAATGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGAAATACTGTCTGTTTTGTATAGAAATCTTTTTAAAAATGAAAA  300

seq1  TTGAGCTAGAAAGCTAATTAAAGTGATTGATTTCTAATAACTGAAATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTAGAAAGCTAATTAAAGTGATTGATTTCTAATAACTGAAATAAA  350

seq1  AGAAAATTCAAAATCCTTTTACTTCATGGACAATAAGTGTCAGTGAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTCAAAATCCTTTTACTTCATGGACAATAAGTGTCAGTGAATAA  400

seq1  ATAGCAGACTTTTGGAAATAAGTTCCCGGAAATGTACCTTTTTTATATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAGACTTTTGGAAATAAGTTCCCGGAAATGTACCTTTTTTATATAC  450

seq1  TGAATATGTATTTAACCTTTTCTAAATAGTTGTGCTGCTATATAATAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATGTATTTAACCTTTTCTAAATAGTTGTGCTGCTATATAATAACT  500

seq1  TTAATTCTATATATTTCTCATATATTCATATCAAAATAAATATGTTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTCTATATATTTCTCATATATTCATATCAAAATAAATATGTTTTTT  550

seq1  CAGTTTACGTGATATCTATAAATTATCCATTGATTAAAAAACATCAGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTACGTGATATCTATAAATTATCCATTGATTAAAAAACATCAGTAA  600

seq1  TAATAATTTCAAATAAAATTCAAATTTTTGATTACCTAAAATATATTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATTTCAAATAAAATTCAAATTTTTGATTACCTAAAATATATTTAA  650

seq1  TATAAATATTTAAAAGGGAGTTTAATATGACTATTTAAAAAATACTTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATATTTAAAAGGGAGTTTAATATGACTATTTAAAAAATACTTCAA  700

seq1  TTCTCTACATGACCCTAGAGCTTTAACAAATCTCAGATCAATGCCAACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTACATGACCCTAGAGCTTTAACAAATCTCAGATCAATGCCAACAA  750

seq1  AATGAGTATGGGTGATTCACTCCAATATATATATGTCATTTGGAATAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTATGGGTGATTCACTCCAATATATATATGTCATTTGGAATAATT  800

seq1  TCTATACAAAATTGTAAAGAAAACAAAAATCATCACAGGACAATTAGATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATACAAAATTGTAAAGAAAACAAAAATCATCACAGGACAATTAGATT  850

seq1  TAAAGATGTCATATAAATAGGTCACTACAAAGTAAACTATTGATAAACCA  900
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TAAAGATGTCATATAAATAGGTCACTACAAAGTAAACTA-TGATAAACCA  899

seq1  CTTAAAATGCAACATATTAGAGAGTTATTGGTTAACCTTTATAACCCCTA  950
      ||||||||||||||||||||||||||| |||||||||||||||  |||||
seq2  CTTAAAATGCAACATATTAGAGAGTTA-TGGTTAACCTTTATA--CCCTA  946

seq1  TTAAGAATGATCTTCTTCATTGTTTTTCCAATGTAGTATGATCATTATGA  1000
       ||||||||||| ||||||||| |||||||||||||||||||||||||| 
seq2  -TAAGAATGATC-TCTTCATTG-TTTTCCAATGTAGTATGATCATTATG-  992

seq1  AAGCTATATAGACACAAGCAACAAAAATGTACTTATCAAATTTTATTGC  1049
      ||||||||||||||| ||||   ||||||||||||||||| ||||||||
seq2  AAGCTATATAGACAC-AGCA--CAAAATGTACTTATCAAA-TTTATTGC  1037