BAC Information

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BAC

Clone NameB6Ng01-140O23
Chromosome15 (Build37)
Map Location 16,194,165 - 16,195,076
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040033, LOC100040046, EG239341, LOC100040087, LOC624183
Downstream geneLOC100040119, Cdh9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140O23.bB6Ng01-140O23.g
ACCDH939532DH939533
length1,145926
definitionDH939532|Mus musculus domesticus DNA, BAC clone: B6Ng01-140O23, 5' end.DH939533|Mus musculus domesticus DNA, BAC clone: B6Ng01-140O23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatgccagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatctgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactagtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgcccacagtcagctaatggatggattacagggctccca
tggagagctagagaaagtactcaagagctaagggatctgcaccctatagt
ggatcacactatgactaacagtcccggagctcttgactcttgctgcatat
gtattcaaagatgctagtcggcatccatggaagagaggtcattgtacacc
aaacttaatgtccgacatggaatccagtcctaaaggggaagtgtc
gaattcttaaaagataatattgctgtgtcacatttctgtgaactacaaat
acatttctgttgagccttgaatatgattgaatacagagaacaatgtaaag
taatttgaattggacacatgccagtattttaaattctccacagctctact
tatctgtctatgcttacccaatatttgaatgtttaaatattgcatttgaa
agtatcagccatatgaggatgcaaaaaatagaatgagtttcttgccatct
tctggtgtcttcattactttttttcttatcaatgtcttaaaggttttata
atacaagtatatatgtctgatatatatcagtaagggtactgactttttgt
gtgctaatttgatagcagaaattataactacagaatagacattttctggt
gaatcttttaaaaatatttatttatttatttatttatttatttatttatt
tatttatttaatgtatatgagtacaccatttttctcttcaggcacaccag
aaaagggcatcagattccattacagatggttgtgagctaccatgtggttg
ctgagaattgaaatcaggacctctggaagagcaaccaatgctctttgact
actgagacatctctctccgtccctacttggtaaattctgtgtagtctcta
atatataaaattgtattttttgaaaatgaaagtacttggacttctttaat
ttatactggtattccttgatattcttcagtttttttattgctctaaataa
gttttcagttaatgaaatcctctcattgttcatgctttttgtgaatatgc
tttgagtttagtttgaattgattttggtaaagctttgtattgtttttctt
ataatgaggtgaagtgatgatgggtttttctttcagtatgtttatgtggt
gcgtatatttattgacttacttatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_16194165_16195076
seq2: B6Ng01-140O23.g_66_973

seq1  GAATTCTTAAAAGATAATATTGCTGTGTCACATTTCTGTGAACTACAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAAAGATAATATTGCTGTGTCACATTTCTGTGAACTACAAAT  50

seq1  ACATTTCTGTTGAGCCTTGAATATGATTGAATACAGAGAACAATGTAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCTGTTGAGCCTTGAATATGATTGAATACAGAGAACAATGTAAAG  100

seq1  TAATTTGAATTGGACACATGCCAGTATTTTAAATTCTCCACAGCTCTACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGAATTGGACACATGCCAGTATTTTAAATTCTCCACAGCTCTACT  150

seq1  TATCTGTCTATGCTTACCCAATATTTGAATGTTTAAATATTGCATTTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTCTATGCTTACCCAATATTTGAATGTTTAAATATTGCATTTGAA  200

seq1  AGTATCAGCCATATGAGGATGCAAAAAATAGAATGAGTTTCTTGCCATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCAGCCATATGAGGATGCAAAAAATAGAATGAGTTTCTTGCCATCT  250

seq1  TCTGGTGTCTTCATTACTTTTTTTCTTATCAATGTCTTAAAGGTTTTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTGTCTTCATTACTTTTTTTCTTATCAATGTCTTAAAGGTTTTATA  300

seq1  ATACAAGTATATATGTCTGATATATATCAGTAAGGGTACTGACTTTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAGTATATATGTCTGATATATATCAGTAAGGGTACTGACTTTTTGT  350

seq1  GTGCTAATTTGATAGCAGAAATTATAACTACAGAATAGACATTTTCTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAATTTGATAGCAGAAATTATAACTACAGAATAGACATTTTCTGGT  400

seq1  GAATCTTTTAAAAATATTTATTTATTTATTTATTTATTTATTTATTTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTTTAAAAATATTTATTTATTTATTTATTTATTTATTTATTTATT  450

seq1  TATTTATTTAATGTATATGAGTACACCATTTTTCTCTTCAGGCACACCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTAATGTATATGAGTACACCATTTTTCTCTTCAGGCACACCAG  500

seq1  AAAAGGGCATCAGATTCCATTACAGATGGTTGTGAGCTACCATGTGGTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGCATCAGATTCCATTACAGATGGTTGTGAGCTACCATGTGGTTG  550

seq1  CTGAGAATTGAAATCAGGACCTCTGGAAGAGCAACCAATGCTCTTTGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAATTGAAATCAGGACCTCTGGAAGAGCAACCAATGCTCTTTGACT  600

seq1  ACTGAGACATCTCTCTCCGTCCCTACTTGGTAAATTCTGTGTAGTCTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGACATCTCTCTCCGTCCCTACTTGGTAAATTCTGTGTAGTCTCTA  650

seq1  ATATATAAAATTGTATTTTTTGAAAATGAAAGTACTTGGACTTCTTTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAAAATTGTATTTTTTGAAAATGAAAGTACTTGGACTTCTTTAAT  700

seq1  TTATACTGGTATTCCTTGATATTCTTCAGTTTTTTTATTGCTCTAAATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACTGGTATTCCTTGATATTCTTCAGTTTTTTTATTGCTCTAAATAA  750

seq1  GTTTTCAGTTAATGAAATCCTCTCATTGTTCATGCTTTTTGTGAATATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAGTTAATGAAATCCTCTCATTGTTCATGCTTTTTGTGAATATGC  800

seq1  TTTGAGTTTAGTTTGAAATTGATTTTGGTAAAGCTTTGTATTGTTTTTCT  850
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTGAGTTTAGTTTG-AATTGATTTTGGTAAAGCTTTGTATTGTTTTTCT  849

seq1  TATAATGAGGTGAAAGTGATGAATGGGTTTTTCTTTCAGTATGTTTATGT  900
      |||||||||||| |||||||| ||||||||||||||||||||||||||||
seq2  TATAATGAGGTG-AAGTGATG-ATGGGTTTTTCTTTCAGTATGTTTATGT  897

seq1  GGTGCGTTATAT  912
      |||||| |||||
seq2  GGTGCG-TATAT  908